[0;36mThank you for using runBioSimulations![0m

[0;36m================================================ Loading Singularity ================================================[0m

[0;36m=================================================== Set up storage ==================================================[0m

[0;36m========================================== Downloading COMBINE/OMEX archive =========================================[0m
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100   139  100   139    0     0    446      0 --:--:-- --:--:-- --:--:--   446

100  3844  100  3844    0     0   9251      0 --:--:-- --:--:-- --:--:--  9251

[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================[0m
INFO:    Using cached SIF image

INFO: No xlwt module available, Excel spreadsheet creation disabled



No module named 'cplex'



CPLEX not available

*****
Using GLPK
*****


INFO: No xlrd module available, Excel spreadsheet reading disabled

CBMPy environment
******************
Revision: r689


***********************************************************************
* Welcome to CBMPy (0.7.25) - PySCeS Constraint Based Modelling       *
*                http://cbmpy.sourceforge.net                         *
* Copyright(C) Brett G. Olivier 2014 - 2019                           *
* Dept. of Systems Bioinformatics                                     *
* Vrije Universiteit Amsterdam, Amsterdam, The Netherlands            *
* CBMPy is developed as part of the BeBasic MetaToolKit Project       *
* Distributed under the GNU GPL v 3.0 licence, see                    *
* LICENCE (supplied with this release) for details                    *
***********************************************************************

[31m`/root/archive.omex` is not a valid COMBINE/OMEX archive.
  - The SED-ML file at location `./tmp770846` is invalid.
    - Data generator `OBJF_1` is invalid.
      - Variable `OBJF` is invalid.
        - One or more namespaces required for target `/sbml:sbml/sbml:model/fbc:listOfObjectives/fbc:objective[@fbc:id='OBJF']` are not defined. Only the following namespaces are defined for the target: `sbml`.[0m
srun: error: xanadu-67: task 0: Exited with exit code 1
srun: Terminating job step 8567496.1

[0;36m===================================================== Saving log ====================================================[0m
Completed 2.6 KiB/2.6 KiB (31.8 KiB/s) with 1 file(s) remaining
upload: ./rawLog.txt to s3://files.biosimulations.org/simulations/672b4ac3b678b3883bb62769/rawLog.txt

[0;36m===================================================== Saving Structured log ==========================================[0m
Completed 1.7 KiB/1.7 KiB (18.7 KiB/s) with 1 file(s) remaining
upload: outputs/log.yml to s3://files.biosimulations.org/simulations/672b4ac3b678b3883bb62769/outputs/log.yml

[0;36m================================================== Zipping outputs ==================================================[0m
  adding: outputs/ (stored 0%)
