[0;36mThank you for using runBioSimulations![0m

[0;36m================================================ Loading Singularity ================================================[0m

[0;36m=================================================== Set up storage ==================================================[0m

[0;36m========================================== Downloading COMBINE/OMEX archive =========================================[0m
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100   139  100   139    0     0    447      0 --:--:-- --:--:-- --:--:--   446

100 4149k  100 4149k    0     0  7948k      0 --:--:-- --:--:-- --:--:-- 7948k

[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================[0m
INFO:    Using cached SIF image
Traceback (most recent call last):
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 247, in <module>
    if not update_paths(args.path, args.scripts_dir, args.clear_args, args.extra_args):
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 213, in update_paths
    update_scripts(scripts_dir, new_path, clear_args, extra_args)
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 125, in update_scripts
    update_script(os.path.join(bin_dir, fn), new_path, clear_args, extra_args)
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 118, in update_script
    with open(script_filename, 'w') as f:
OSError: [Errno 30] Read-only file system: '/home/opencor/OpenCOR/bin/../python/bin/biosimulators-utils'
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mCOMBINE/OMEX archive may be invalid.
  - The manifest does not include its parent COMBINE/OMEX archive. Manifests should include their parent COMBINE/OMEX archives.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe SED document is potentially incorrect.
  - Model `model` may be invalid.
    - The changes of the model may be invalid.
      - Change 1 may be invalid.
        - XPath could not be validated.
      - Change 2 may be invalid.
        - XPath could not be validated.
      - Change 3 may be invalid.
        - XPath could not be validated.
      - Change 4 may be invalid.
        - XPath could not be validated.
      - Change 5 may be invalid.
        - XPath could not be validated.
      - Change 6 may be invalid.
        - XPath could not be validated.
      - Change 7 may be invalid.
        - XPath could not be validated.
      - Change 8 may be invalid.
        - XPath could not be validated.
      - Change 9 may be invalid.
        - XPath could not be validated.
      - Change 10 may be invalid.
        - XPath could not be validated.
      - Change 11 may be invalid.
        - XPath could not be validated.
      - Change 12 may be invalid.
        - XPath could not be validated.
      - Change 13 may be invalid.
        - XPath could not be validated.
      - Change 14 may be invalid.
        - XPath could not be validated.
      - Change 15 may be invalid.
        - XPath could not be validated.
      - Change 16 may be invalid.
        - XPath could not be validated.
      - Change 17 may be invalid.
        - XPath could not be validated.
      - Change 18 may be invalid.
        - XPath could not be validated.
      - Change 19 may be invalid.
        - XPath could not be validated.
      - Change 20 may be invalid.
        - XPath could not be validated.
      - Change 21 may be invalid.
        - XPath could not be validated.
      - Change 22 may be invalid.
        - XPath could not be validated.
      - Change 23 may be invalid.
        - XPath could not be validated.
      - Change 24 may be invalid.
        - XPath could not be validated.
      - Change 25 may be invalid.
        - XPath could not be validated.
      - Change 26 may be invalid.
        - XPath could not be validated.
      - Change 27 may be invalid.
        - XPath could not be validated.
      - Change 28 may be invalid.
        - XPath could not be validated.
      - Change 29 may be invalid.
        - XPath could not be validated.
      - Change 30 may be invalid.
        - XPath could not be validated.
      - Change 31 may be invalid.
        - XPath could not be validated.
      - Change 32 may be invalid.
        - XPath could not be validated.
      - Change 33 may be invalid.
        - XPath could not be validated.
      - Change 34 may be invalid.
        - XPath could not be validated.
      - Change 35 may be invalid.
        - XPath could not be validated.
  - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
    - Variable `value_component_environment_variable_time` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_T_variable_T` may be invalid.
    - Variable `value_component_T_variable_T` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_I_variable_I` may be invalid.
    - Variable `value_component_I_variable_I` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_x_variable_x` may be invalid.
    - Variable `value_component_x_variable_x` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_y_variable_y` may be invalid.
    - Variable `value_component_y_variable_y` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_v_variable_v` may be invalid.
    - Variable `value_component_v_variable_v` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_w_variable_w` may be invalid.
    - Variable `value_component_w_variable_w` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_m_9_variable_m_9` may be invalid.
    - Variable `value_component_m_9_variable_m_9` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_m_8_variable_m_8` may be invalid.
    - Variable `value_component_m_8_variable_m_8` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_m_7_variable_m_7` may be invalid.
    - Variable `value_component_m_7_variable_m_7` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_m_6_variable_m_6` may be invalid.
    - Variable `value_component_m_6_variable_m_6` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_m_5_variable_m_5` may be invalid.
    - Variable `value_component_m_5_variable_m_5` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_m_4_variable_m_4` may be invalid.
    - Variable `value_component_m_4_variable_m_4` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_m_3_variable_m_3` may be invalid.
    - Variable `value_component_m_3_variable_m_3` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_m_2_variable_m_2` may be invalid.
    - Variable `value_component_m_2_variable_m_2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_m_1_variable_m_1` may be invalid.
    - Variable `value_component_m_1_variable_m_1` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_m_0_variable_m_0` may be invalid.
    - Variable `value_component_m_0_variable_m_0` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_z_variable_z` may be invalid.
    - Variable `value_component_z_variable_z` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_r` may be invalid.
    - Variable `value_component_model_parameters_variable_r` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k` may be invalid.
    - Variable `value_component_model_parameters_variable_k` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_d` may be invalid.
    - Variable `value_component_model_parameters_variable_d` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_beta` may be invalid.
    - Variable `value_component_model_parameters_variable_beta` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_a` may be invalid.
    - Variable `value_component_model_parameters_variable_a` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_eta` may be invalid.
    - Variable `value_component_model_parameters_variable_eta` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_u` may be invalid.
    - Variable `value_component_model_parameters_variable_u` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_alpha` may be invalid.
    - Variable `value_component_model_parameters_variable_alpha` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_gamma` may be invalid.
    - Variable `value_component_model_parameters_variable_gamma` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_delta` may be invalid.
    - Variable `value_component_model_parameters_variable_delta` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_lambda` may be invalid.
    - Variable `value_component_model_parameters_variable_lambda` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_p` may be invalid.
    - Variable `value_component_model_parameters_variable_p` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_c` may be invalid.
    - Variable `value_component_model_parameters_variable_c` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_b` may be invalid.
    - Variable `value_component_model_parameters_variable_b` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_epsilon` may be invalid.
    - Variable `value_component_model_parameters_variable_epsilon` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_xi` may be invalid.
    - Variable `value_component_model_parameters_variable_xi` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_rho` may be invalid.
    - Variable `value_component_model_parameters_variable_rho` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_phi` may be invalid.
    - Variable `value_component_model_parameters_variable_phi` may be invalid.
      - XPath could not be validated.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe SED document is potentially incorrect.
  - Model `model` may be invalid.
    - The changes of the model may be invalid.
      - Change 1 may be invalid.
        - XPath could not be validated.
      - Change 2 may be invalid.
        - XPath could not be validated.
      - Change 3 may be invalid.
        - XPath could not be validated.
      - Change 4 may be invalid.
        - XPath could not be validated.
      - Change 5 may be invalid.
        - XPath could not be validated.
      - Change 6 may be invalid.
        - XPath could not be validated.
      - Change 7 may be invalid.
        - XPath could not be validated.
      - Change 8 may be invalid.
        - XPath could not be validated.
      - Change 9 may be invalid.
        - XPath could not be validated.
      - Change 10 may be invalid.
        - XPath could not be validated.
  - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
    - Variable `value_component_environment_variable_time` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_x_variable_x` may be invalid.
    - Variable `value_component_x_variable_x` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_y_variable_y` may be invalid.
    - Variable `value_component_y_variable_y` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_v_variable_v` may be invalid.
    - Variable `value_component_v_variable_v` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_r` may be invalid.
    - Variable `value_component_model_parameters_variable_r` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k` may be invalid.
    - Variable `value_component_model_parameters_variable_k` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_d` may be invalid.
    - Variable `value_component_model_parameters_variable_d` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_beta` may be invalid.
    - Variable `value_component_model_parameters_variable_beta` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_a` may be invalid.
    - Variable `value_component_model_parameters_variable_a` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_eta` may be invalid.
    - Variable `value_component_model_parameters_variable_eta` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_u` may be invalid.
    - Variable `value_component_model_parameters_variable_u` may be invalid.
      - XPath could not be validated.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe SED document is potentially incorrect.
  - Model `model` may be invalid.
    - The changes of the model may be invalid.
      - Change 1 may be invalid.
        - XPath could not be validated.
      - Change 2 may be invalid.
        - XPath could not be validated.
      - Change 3 may be invalid.
        - XPath could not be validated.
      - Change 4 may be invalid.
        - XPath could not be validated.
      - Change 5 may be invalid.
        - XPath could not be validated.
      - Change 6 may be invalid.
        - XPath could not be validated.
      - Change 7 may be invalid.
        - XPath could not be validated.
      - Change 8 may be invalid.
        - XPath could not be validated.
      - Change 9 may be invalid.
        - XPath could not be validated.
      - Change 10 may be invalid.
        - XPath could not be validated.
      - Change 11 may be invalid.
        - XPath could not be validated.
      - Change 12 may be invalid.
        - XPath could not be validated.
      - Change 13 may be invalid.
        - XPath could not be validated.
      - Change 14 may be invalid.
        - XPath could not be validated.
      - Change 15 may be invalid.
        - XPath could not be validated.
      - Change 16 may be invalid.
        - XPath could not be validated.
  - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
    - Variable `value_component_environment_variable_time` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_T_variable_T` may be invalid.
    - Variable `value_component_T_variable_T` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_I_variable_I` may be invalid.
    - Variable `value_component_I_variable_I` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_x_variable_x` may be invalid.
    - Variable `value_component_x_variable_x` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_y_variable_y` may be invalid.
    - Variable `value_component_y_variable_y` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_v_variable_v` may be invalid.
    - Variable `value_component_v_variable_v` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_r` may be invalid.
    - Variable `value_component_model_parameters_variable_r` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k` may be invalid.
    - Variable `value_component_model_parameters_variable_k` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_d` may be invalid.
    - Variable `value_component_model_parameters_variable_d` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_beta` may be invalid.
    - Variable `value_component_model_parameters_variable_beta` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_a` may be invalid.
    - Variable `value_component_model_parameters_variable_a` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_eta` may be invalid.
    - Variable `value_component_model_parameters_variable_eta` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_u` may be invalid.
    - Variable `value_component_model_parameters_variable_u` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_alpha` may be invalid.
    - Variable `value_component_model_parameters_variable_alpha` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_gamma` may be invalid.
    - Variable `value_component_model_parameters_variable_gamma` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_delta` may be invalid.
    - Variable `value_component_model_parameters_variable_delta` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_lambda` may be invalid.
    - Variable `value_component_model_parameters_variable_lambda` may be invalid.
      - XPath could not be validated.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe SED document is potentially incorrect.
  - Model `model` may be invalid.
    - The changes of the model may be invalid.
      - Change 1 may be invalid.
        - XPath could not be validated.
      - Change 2 may be invalid.
        - XPath could not be validated.
      - Change 3 may be invalid.
        - XPath could not be validated.
      - Change 4 may be invalid.
        - XPath could not be validated.
      - Change 5 may be invalid.
        - XPath could not be validated.
      - Change 6 may be invalid.
        - XPath could not be validated.
      - Change 7 may be invalid.
        - XPath could not be validated.
  - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
    - Variable `value_component_environment_variable_time` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_y_variable_y` may be invalid.
    - Variable `value_component_y_variable_y` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_y_variable_r` may be invalid.
    - Variable `value_component_y_variable_r` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_y_variable_a` may be invalid.
    - Variable `value_component_y_variable_a` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_y_variable_k` may be invalid.
    - Variable `value_component_y_variable_k` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_v_variable_v` may be invalid.
    - Variable `value_component_v_variable_v` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_v_variable_u` may be invalid.
    - Variable `value_component_v_variable_u` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_v_variable_eta` may be invalid.
    - Variable `value_component_v_variable_eta` may be invalid.
      - XPath could not be validated.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe COMBINE/OMEX archive may be invalid.
  - The SED-ML file at location `simulation_0.sedml` may be invalid.
    - Model `model` may be invalid.
      - The changes of the model may be invalid.
        - Change 1 may be invalid.
          - XPath could not be validated.
        - Change 2 may be invalid.
          - XPath could not be validated.
        - Change 3 may be invalid.
          - XPath could not be validated.
        - Change 4 may be invalid.
          - XPath could not be validated.
        - Change 5 may be invalid.
          - XPath could not be validated.
        - Change 6 may be invalid.
          - XPath could not be validated.
        - Change 7 may be invalid.
          - XPath could not be validated.
        - Change 8 may be invalid.
          - XPath could not be validated.
        - Change 9 may be invalid.
          - XPath could not be validated.
        - Change 10 may be invalid.
          - XPath could not be validated.
        - Change 11 may be invalid.
          - XPath could not be validated.
        - Change 12 may be invalid.
          - XPath could not be validated.
        - Change 13 may be invalid.
          - XPath could not be validated.
        - Change 14 may be invalid.
          - XPath could not be validated.
        - Change 15 may be invalid.
          - XPath could not be validated.
        - Change 16 may be invalid.
          - XPath could not be validated.
        - Change 17 may be invalid.
          - XPath could not be validated.
        - Change 18 may be invalid.
          - XPath could not be validated.
        - Change 19 may be invalid.
          - XPath could not be validated.
        - Change 20 may be invalid.
          - XPath could not be validated.
        - Change 21 may be invalid.
          - XPath could not be validated.
        - Change 22 may be invalid.
          - XPath could not be validated.
        - Change 23 may be invalid.
          - XPath could not be validated.
        - Change 24 may be invalid.
          - XPath could not be validated.
        - Change 25 may be invalid.
          - XPath could not be validated.
        - Change 26 may be invalid.
          - XPath could not be validated.
        - Change 27 may be invalid.
          - XPath could not be validated.
        - Change 28 may be invalid.
          - XPath could not be validated.
        - Change 29 may be invalid.
          - XPath could not be validated.
        - Change 30 may be invalid.
          - XPath could not be validated.
        - Change 31 may be invalid.
          - XPath could not be validated.
        - Change 32 may be invalid.
          - XPath could not be validated.
        - Change 33 may be invalid.
          - XPath could not be validated.
        - Change 34 may be invalid.
          - XPath could not be validated.
        - Change 35 may be invalid.
          - XPath could not be validated.
    - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
      - Variable `value_component_environment_variable_time` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_T_variable_T` may be invalid.
      - Variable `value_component_T_variable_T` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_I_variable_I` may be invalid.
      - Variable `value_component_I_variable_I` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_x_variable_x` may be invalid.
      - Variable `value_component_x_variable_x` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_y_variable_y` may be invalid.
      - Variable `value_component_y_variable_y` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_v_variable_v` may be invalid.
      - Variable `value_component_v_variable_v` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_w_variable_w` may be invalid.
      - Variable `value_component_w_variable_w` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_m_9_variable_m_9` may be invalid.
      - Variable `value_component_m_9_variable_m_9` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_m_8_variable_m_8` may be invalid.
      - Variable `value_component_m_8_variable_m_8` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_m_7_variable_m_7` may be invalid.
      - Variable `value_component_m_7_variable_m_7` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_m_6_variable_m_6` may be invalid.
      - Variable `value_component_m_6_variable_m_6` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_m_5_variable_m_5` may be invalid.
      - Variable `value_component_m_5_variable_m_5` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_m_4_variable_m_4` may be invalid.
      - Variable `value_component_m_4_variable_m_4` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_m_3_variable_m_3` may be invalid.
      - Variable `value_component_m_3_variable_m_3` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_m_2_variable_m_2` may be invalid.
      - Variable `value_component_m_2_variable_m_2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_m_1_variable_m_1` may be invalid.
      - Variable `value_component_m_1_variable_m_1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_m_0_variable_m_0` may be invalid.
      - Variable `value_component_m_0_variable_m_0` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_z_variable_z` may be invalid.
      - Variable `value_component_z_variable_z` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_r` may be invalid.
      - Variable `value_component_model_parameters_variable_r` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k` may be invalid.
      - Variable `value_component_model_parameters_variable_k` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_d` may be invalid.
      - Variable `value_component_model_parameters_variable_d` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_beta` may be invalid.
      - Variable `value_component_model_parameters_variable_beta` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_a` may be invalid.
      - Variable `value_component_model_parameters_variable_a` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_eta` may be invalid.
      - Variable `value_component_model_parameters_variable_eta` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_u` may be invalid.
      - Variable `value_component_model_parameters_variable_u` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_alpha` may be invalid.
      - Variable `value_component_model_parameters_variable_alpha` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_gamma` may be invalid.
      - Variable `value_component_model_parameters_variable_gamma` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_delta` may be invalid.
      - Variable `value_component_model_parameters_variable_delta` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_lambda` may be invalid.
      - Variable `value_component_model_parameters_variable_lambda` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_p` may be invalid.
      - Variable `value_component_model_parameters_variable_p` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_c` may be invalid.
      - Variable `value_component_model_parameters_variable_c` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_b` may be invalid.
      - Variable `value_component_model_parameters_variable_b` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_epsilon` may be invalid.
      - Variable `value_component_model_parameters_variable_epsilon` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_xi` may be invalid.
      - Variable `value_component_model_parameters_variable_xi` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_rho` may be invalid.
      - Variable `value_component_model_parameters_variable_rho` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_phi` may be invalid.
      - Variable `value_component_model_parameters_variable_phi` may be invalid.
        - XPath could not be validated.
  - The SED-ML file at location `simulation_1.sedml` may be invalid.
    - Model `model` may be invalid.
      - The changes of the model may be invalid.
        - Change 1 may be invalid.
          - XPath could not be validated.
        - Change 2 may be invalid.
          - XPath could not be validated.
        - Change 3 may be invalid.
          - XPath could not be validated.
        - Change 4 may be invalid.
          - XPath could not be validated.
        - Change 5 may be invalid.
          - XPath could not be validated.
        - Change 6 may be invalid.
          - XPath could not be validated.
        - Change 7 may be invalid.
          - XPath could not be validated.
        - Change 8 may be invalid.
          - XPath could not be validated.
        - Change 9 may be invalid.
          - XPath could not be validated.
        - Change 10 may be invalid.
          - XPath could not be validated.
    - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
      - Variable `value_component_environment_variable_time` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_x_variable_x` may be invalid.
      - Variable `value_component_x_variable_x` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_y_variable_y` may be invalid.
      - Variable `value_component_y_variable_y` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_v_variable_v` may be invalid.
      - Variable `value_component_v_variable_v` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_r` may be invalid.
      - Variable `value_component_model_parameters_variable_r` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k` may be invalid.
      - Variable `value_component_model_parameters_variable_k` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_d` may be invalid.
      - Variable `value_component_model_parameters_variable_d` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_beta` may be invalid.
      - Variable `value_component_model_parameters_variable_beta` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_a` may be invalid.
      - Variable `value_component_model_parameters_variable_a` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_eta` may be invalid.
      - Variable `value_component_model_parameters_variable_eta` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_u` may be invalid.
      - Variable `value_component_model_parameters_variable_u` may be invalid.
        - XPath could not be validated.
  - The SED-ML file at location `simulation_2.sedml` may be invalid.
    - Model `model` may be invalid.
      - The changes of the model may be invalid.
        - Change 1 may be invalid.
          - XPath could not be validated.
        - Change 2 may be invalid.
          - XPath could not be validated.
        - Change 3 may be invalid.
          - XPath could not be validated.
        - Change 4 may be invalid.
          - XPath could not be validated.
        - Change 5 may be invalid.
          - XPath could not be validated.
        - Change 6 may be invalid.
          - XPath could not be validated.
        - Change 7 may be invalid.
          - XPath could not be validated.
        - Change 8 may be invalid.
          - XPath could not be validated.
        - Change 9 may be invalid.
          - XPath could not be validated.
        - Change 10 may be invalid.
          - XPath could not be validated.
        - Change 11 may be invalid.
          - XPath could not be validated.
        - Change 12 may be invalid.
          - XPath could not be validated.
        - Change 13 may be invalid.
          - XPath could not be validated.
        - Change 14 may be invalid.
          - XPath could not be validated.
        - Change 15 may be invalid.
          - XPath could not be validated.
        - Change 16 may be invalid.
          - XPath could not be validated.
    - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
      - Variable `value_component_environment_variable_time` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_T_variable_T` may be invalid.
      - Variable `value_component_T_variable_T` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_I_variable_I` may be invalid.
      - Variable `value_component_I_variable_I` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_x_variable_x` may be invalid.
      - Variable `value_component_x_variable_x` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_y_variable_y` may be invalid.
      - Variable `value_component_y_variable_y` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_v_variable_v` may be invalid.
      - Variable `value_component_v_variable_v` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_r` may be invalid.
      - Variable `value_component_model_parameters_variable_r` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k` may be invalid.
      - Variable `value_component_model_parameters_variable_k` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_d` may be invalid.
      - Variable `value_component_model_parameters_variable_d` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_beta` may be invalid.
      - Variable `value_component_model_parameters_variable_beta` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_a` may be invalid.
      - Variable `value_component_model_parameters_variable_a` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_eta` may be invalid.
      - Variable `value_component_model_parameters_variable_eta` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_u` may be invalid.
      - Variable `value_component_model_parameters_variable_u` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_alpha` may be invalid.
      - Variable `value_component_model_parameters_variable_alpha` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_gamma` may be invalid.
      - Variable `value_component_model_parameters_variable_gamma` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_delta` may be invalid.
      - Variable `value_component_model_parameters_variable_delta` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_lambda` may be invalid.
      - Variable `value_component_model_parameters_variable_lambda` may be invalid.
        - XPath could not be validated.
  - The SED-ML file at location `simulation_3.sedml` may be invalid.
    - Model `model` may be invalid.
      - The changes of the model may be invalid.
        - Change 1 may be invalid.
          - XPath could not be validated.
        - Change 2 may be invalid.
          - XPath could not be validated.
        - Change 3 may be invalid.
          - XPath could not be validated.
        - Change 4 may be invalid.
          - XPath could not be validated.
        - Change 5 may be invalid.
          - XPath could not be validated.
        - Change 6 may be invalid.
          - XPath could not be validated.
        - Change 7 may be invalid.
          - XPath could not be validated.
    - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
      - Variable `value_component_environment_variable_time` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_y_variable_y` may be invalid.
      - Variable `value_component_y_variable_y` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_y_variable_r` may be invalid.
      - Variable `value_component_y_variable_r` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_y_variable_a` may be invalid.
      - Variable `value_component_y_variable_a` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_y_variable_k` may be invalid.
      - Variable `value_component_y_variable_k` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_v_variable_v` may be invalid.
      - Variable `value_component_v_variable_v` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_v_variable_u` may be invalid.
      - Variable `value_component_v_variable_u` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_v_variable_eta` may be invalid.
      - Variable `value_component_v_variable_eta` may be invalid.
        - XPath could not be validated.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
Archive contains 4 SED-ML documents with 4 models, 4 simulations, 4 tasks, 4 reports, and 0 plots:
  simulation_0.sedml:
    Tasks (1):
      task
    Reports (1):
      report: 36 data sets
  simulation_1.sedml:
    Tasks (1):
      task
    Reports (1):
      report: 11 data sets
  simulation_2.sedml:
    Tasks (1):
      task
    Reports (1):
      report: 17 data sets
  simulation_3.sedml:
    Tasks (1):
      task
    Reports (1):
      report: 8 data sets

Executing SED-ML file 1: simulation_0.sedml ...
Executing SED-ML file 2: simulation_1.sedml ...
Executing SED-ML file 3: simulation_2.sedml ...
Executing SED-ML file 4: simulation_3.sedml ...

Bundling outputs ...
Cleaning up ...

============= SUMMARY =============
Executed 4 SED documents:
  SED documents (4):
    Succeeded: 4
    Skipped: 0
    Failed: 0
  Tasks (4):
    Succeeded: 4
    Skipped: 0
    Failed: 0
  Outputs (4):
    Succeeded: 4
    Skipped: 0
    Failed: 0


[0;36m===================================================== Saving log ====================================================[0m
Completed 44.0 KiB/44.0 KiB (496.0 KiB/s) with 1 file(s) remaining
upload: ./rawLog.txt to s3://files.biosimulations.org/simulations/626178d290c6a19595579b59/rawLog.txt
Completed 64.1 KiB/64.1 KiB (628.6 KiB/s) with 1 file(s) remaining
upload: outputs/log.yml to s3://files.biosimulations.org/simulations/626178d290c6a19595579b59/outputs/log.yml

[0;36m================================================== Zipping outputs ==================================================[0m
  adding: outputs/ (stored 0%)
