[0;36mThank you for using runBioSimulations![0m

[0;36m================================================ Loading Singularity ================================================[0m

[0;36m=================================================== Set up storage ==================================================[0m

[0;36m========================================== Downloading COMBINE/OMEX archive =========================================[0m
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100   139  100   139    0     0    478      0 --:--:-- --:--:-- --:--:--   479

100  431k  100  431k    0     0   921k      0 --:--:-- --:--:-- --:--:--  921k

[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================[0m
INFO:    Using cached SIF image
Traceback (most recent call last):
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 247, in <module>
    if not update_paths(args.path, args.scripts_dir, args.clear_args, args.extra_args):
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 213, in update_paths
    update_scripts(scripts_dir, new_path, clear_args, extra_args)
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 125, in update_scripts
    update_script(os.path.join(bin_dir, fn), new_path, clear_args, extra_args)
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 118, in update_script
    with open(script_filename, 'w') as f:
OSError: [Errno 30] Read-only file system: '/home/opencor/OpenCOR/bin/../python/bin/biosimulators-utils'
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mCOMBINE/OMEX archive may be invalid.
  - The manifest does not include its parent COMBINE/OMEX archive. Manifests should include their parent COMBINE/OMEX archives.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe SED document is potentially incorrect.
  - Model `model` may be invalid.
    - The changes of the model may be invalid.
      - Change 1 may be invalid.
        - XPath could not be validated.
      - Change 2 may be invalid.
        - XPath could not be validated.
      - Change 3 may be invalid.
        - XPath could not be validated.
      - Change 4 may be invalid.
        - XPath could not be validated.
      - Change 5 may be invalid.
        - XPath could not be validated.
      - Change 6 may be invalid.
        - XPath could not be validated.
      - Change 7 may be invalid.
        - XPath could not be validated.
      - Change 8 may be invalid.
        - XPath could not be validated.
      - Change 9 may be invalid.
        - XPath could not be validated.
      - Change 10 may be invalid.
        - XPath could not be validated.
      - Change 11 may be invalid.
        - XPath could not be validated.
      - Change 12 may be invalid.
        - XPath could not be validated.
      - Change 13 may be invalid.
        - XPath could not be validated.
      - Change 14 may be invalid.
        - XPath could not be validated.
      - Change 15 may be invalid.
        - XPath could not be validated.
      - Change 16 may be invalid.
        - XPath could not be validated.
      - Change 17 may be invalid.
        - XPath could not be validated.
      - Change 18 may be invalid.
        - XPath could not be validated.
      - Change 19 may be invalid.
        - XPath could not be validated.
      - Change 20 may be invalid.
        - XPath could not be validated.
      - Change 21 may be invalid.
        - XPath could not be validated.
      - Change 22 may be invalid.
        - XPath could not be validated.
      - Change 23 may be invalid.
        - XPath could not be validated.
      - Change 24 may be invalid.
        - XPath could not be validated.
      - Change 25 may be invalid.
        - XPath could not be validated.
      - Change 26 may be invalid.
        - XPath could not be validated.
      - Change 27 may be invalid.
        - XPath could not be validated.
      - Change 28 may be invalid.
        - XPath could not be validated.
      - Change 29 may be invalid.
        - XPath could not be validated.
      - Change 30 may be invalid.
        - XPath could not be validated.
      - Change 31 may be invalid.
        - XPath could not be validated.
      - Change 32 may be invalid.
        - XPath could not be validated.
      - Change 33 may be invalid.
        - XPath could not be validated.
      - Change 34 may be invalid.
        - XPath could not be validated.
      - Change 35 may be invalid.
        - XPath could not be validated.
      - Change 36 may be invalid.
        - XPath could not be validated.
      - Change 37 may be invalid.
        - XPath could not be validated.
      - Change 38 may be invalid.
        - XPath could not be validated.
      - Change 39 may be invalid.
        - XPath could not be validated.
      - Change 40 may be invalid.
        - XPath could not be validated.
      - Change 41 may be invalid.
        - XPath could not be validated.
      - Change 42 may be invalid.
        - XPath could not be validated.
      - Change 43 may be invalid.
        - XPath could not be validated.
      - Change 44 may be invalid.
        - XPath could not be validated.
      - Change 45 may be invalid.
        - XPath could not be validated.
      - Change 46 may be invalid.
        - XPath could not be validated.
      - Change 47 may be invalid.
        - XPath could not be validated.
      - Change 48 may be invalid.
        - XPath could not be validated.
      - Change 49 may be invalid.
        - XPath could not be validated.
      - Change 50 may be invalid.
        - XPath could not be validated.
      - Change 51 may be invalid.
        - XPath could not be validated.
  - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
    - Variable `value_component_environment_variable_time` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_volume_i_variable_volume_i0` may be invalid.
    - Variable `value_component_volume_i_variable_volume_i0` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_volume_i_variable_volume_i` may be invalid.
    - Variable `value_component_volume_i_variable_volume_i` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_volume_er_variable_gamma` may be invalid.
    - Variable `value_component_volume_er_variable_gamma` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_volume_er_variable_volume_er` may be invalid.
    - Variable `value_component_volume_er_variable_volume_er` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_volumeCa_i_variable_volumeCa_i` may be invalid.
    - Variable `value_component_volumeCa_i_variable_volumeCa_i` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Ca_i_variable_Ca_i` may be invalid.
    - Variable `value_component_Ca_i_variable_Ca_i` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_volumeCa_er_variable_volumeCa_er` may be invalid.
    - Variable `value_component_volumeCa_er_variable_volumeCa_er` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Ca_er_variable_Ca_er` may be invalid.
    - Variable `value_component_Ca_er_variable_Ca_er` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_volume_iIP3_variable_volume_iIP3` may be invalid.
    - Variable `value_component_volume_iIP3_variable_volume_iIP3` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_IP3_variable_IP3` may be invalid.
    - Variable `value_component_IP3_variable_IP3` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_PIP2_variable_PIP2` may be invalid.
    - Variable `value_component_PIP2_variable_PIP2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_PIP2_variable_PIP2_Total` may be invalid.
    - Variable `value_component_PIP2_variable_PIP2_Total` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_IPX_variable_IPX` may be invalid.
    - Variable `value_component_IPX_variable_IPX` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_IPX_variable_PIP2_Total` may be invalid.
    - Variable `value_component_IPX_variable_PIP2_Total` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_J_ip3R_variable_J_ip3R` may be invalid.
    - Variable `value_component_J_ip3R_variable_J_ip3R` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_J_ip3R_variable_J_ip3R0` may be invalid.
    - Variable `value_component_J_ip3R_variable_J_ip3R0` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_receptor_variable_ATP_e` may be invalid.
    - Variable `value_component_receptor_variable_ATP_e` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_receptor_variable_V_IP3` may be invalid.
    - Variable `value_component_receptor_variable_V_IP3` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_receptor_variable_MechanicalStimulation` may be invalid.
    - Variable `value_component_receptor_variable_MechanicalStimulation` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_receptor_variable_V_mech` may be invalid.
    - Variable `value_component_receptor_variable_V_mech` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_receptor_variable_V_mech0` may be invalid.
    - Variable `value_component_receptor_variable_V_mech0` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_receptor_variable_C_1` may be invalid.
    - Variable `value_component_receptor_variable_C_1` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_receptor_variable_C_2` may be invalid.
    - Variable `value_component_receptor_variable_C_2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_receptor_variable_C_3` may be invalid.
    - Variable `value_component_receptor_variable_C_3` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_receptor_variable_C_4` may be invalid.
    - Variable `value_component_receptor_variable_C_4` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_receptor_variable_V_ATP` may be invalid.
    - Variable `value_component_receptor_variable_V_ATP` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_receptor_variable_K_ATP` may be invalid.
    - Variable `value_component_receptor_variable_K_ATP` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_J_ip3P_variable_J_ip3P` may be invalid.
    - Variable `value_component_J_ip3P_variable_J_ip3P` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_J_ip3D_variable_J_ip3D` may be invalid.
    - Variable `value_component_J_ip3D_variable_J_ip3D` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_J_ip3D_variable_Beta_1` may be invalid.
    - Variable `value_component_J_ip3D_variable_Beta_1` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_J_ip3D_variable_Beta_2` may be invalid.
    - Variable `value_component_J_ip3D_variable_Beta_2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_J_ip3D_variable_F_Ca` may be invalid.
    - Variable `value_component_J_ip3D_variable_F_Ca` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_J_ip3D_variable_K_rc` may be invalid.
    - Variable `value_component_J_ip3D_variable_K_rc` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_J_ip3D_variable_K_IP3` may be invalid.
    - Variable `value_component_J_ip3D_variable_K_IP3` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jipt_variable_Jipt` may be invalid.
    - Variable `value_component_Jipt_variable_Jipt` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jipt_variable_Pipt` may be invalid.
    - Variable `value_component_Jipt_variable_Pipt` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jipt_variable_Jipt0` may be invalid.
    - Variable `value_component_Jipt_variable_Jipt0` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jryr_variable_Ka` may be invalid.
    - Variable `value_component_Jryr_variable_Ka` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jryr_variable_Kb` may be invalid.
    - Variable `value_component_Jryr_variable_Kb` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jryr_variable_Kc` may be invalid.
    - Variable `value_component_Jryr_variable_Kc` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jryr_variable_Jryr` may be invalid.
    - Variable `value_component_Jryr_variable_Jryr` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jryr_variable_Jryr0` may be invalid.
    - Variable `value_component_Jryr_variable_Jryr0` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jryr_variable_Pryr` may be invalid.
    - Variable `value_component_Jryr_variable_Pryr` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jryr_variable_W_inf` may be invalid.
    - Variable `value_component_Jryr_variable_W_inf` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jer_variable_Jer` may be invalid.
    - Variable `value_component_Jer_variable_Jer` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jer_variable_Jer0` may be invalid.
    - Variable `value_component_Jer_variable_Jer0` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jserca_variable_Jserca` may be invalid.
    - Variable `value_component_Jserca_variable_Jserca` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jserca_variable_Vserca` may be invalid.
    - Variable `value_component_Jserca_variable_Vserca` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jserca_variable_Kserca` may be invalid.
    - Variable `value_component_Jserca_variable_Kserca` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jin_variable_Jin` may be invalid.
    - Variable `value_component_Jin_variable_Jin` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jin_variable_Vm` may be invalid.
    - Variable `value_component_Jin_variable_Vm` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jin_variable_V_Ca` may be invalid.
    - Variable `value_component_Jin_variable_V_Ca` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jin_variable_R` may be invalid.
    - Variable `value_component_Jin_variable_R` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jin_variable_T` may be invalid.
    - Variable `value_component_Jin_variable_T` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jin_variable_F` may be invalid.
    - Variable `value_component_Jin_variable_F` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jin_variable_z_Ca` may be invalid.
    - Variable `value_component_Jin_variable_z_Ca` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jin_variable_Ca_ext` may be invalid.
    - Variable `value_component_Jin_variable_Ca_ext` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jin_variable_P_pm_1` may be invalid.
    - Variable `value_component_Jin_variable_P_pm_1` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jin_variable_P_pm_2` may be invalid.
    - Variable `value_component_Jin_variable_P_pm_2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jin_variable_Iin_1` may be invalid.
    - Variable `value_component_Jin_variable_Iin_1` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jin_variable_Iin_2` may be invalid.
    - Variable `value_component_Jin_variable_Iin_2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jin_variable_Jin_1` may be invalid.
    - Variable `value_component_Jin_variable_Jin_1` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jin_variable_Jin_2` may be invalid.
    - Variable `value_component_Jin_variable_Jin_2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jpm_variable_Jpm` may be invalid.
    - Variable `value_component_Jpm_variable_Jpm` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jpm_variable_Vpm` may be invalid.
    - Variable `value_component_Jpm_variable_Vpm` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Jpm_variable_Kpm` may be invalid.
    - Variable `value_component_Jpm_variable_Kpm` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_O_variable_O` may be invalid.
    - Variable `value_component_O_variable_O` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_O_variable_S` may be invalid.
    - Variable `value_component_O_variable_S` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_I1_variable_I1` may be invalid.
    - Variable `value_component_I1_variable_I1` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_I2_variable_I2` may be invalid.
    - Variable `value_component_I2_variable_I2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_constants_variable_k1` may be invalid.
    - Variable `value_component_constants_variable_k1` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_constants_variable_k1_` may be invalid.
    - Variable `value_component_constants_variable_k1_` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_constants_variable_k2` may be invalid.
    - Variable `value_component_constants_variable_k2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_constants_variable_k3` may be invalid.
    - Variable `value_component_constants_variable_k3` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_constants_variable_k4` may be invalid.
    - Variable `value_component_constants_variable_k4` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_constants_variable_k5` may be invalid.
    - Variable `value_component_constants_variable_k5` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_constants_variable_alpha_1` may be invalid.
    - Variable `value_component_constants_variable_alpha_1` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_constants_variable_beta_1` may be invalid.
    - Variable `value_component_constants_variable_beta_1` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_constants_variable_alpha_4` may be invalid.
    - Variable `value_component_constants_variable_alpha_4` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_constants_variable_beta_4` may be invalid.
    - Variable `value_component_constants_variable_beta_4` may be invalid.
      - XPath could not be validated.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe COMBINE/OMEX archive may be invalid.
  - The SED-ML file at location `simulation_0.sedml` may be invalid.
    - Model `model` may be invalid.
      - The changes of the model may be invalid.
        - Change 1 may be invalid.
          - XPath could not be validated.
        - Change 2 may be invalid.
          - XPath could not be validated.
        - Change 3 may be invalid.
          - XPath could not be validated.
        - Change 4 may be invalid.
          - XPath could not be validated.
        - Change 5 may be invalid.
          - XPath could not be validated.
        - Change 6 may be invalid.
          - XPath could not be validated.
        - Change 7 may be invalid.
          - XPath could not be validated.
        - Change 8 may be invalid.
          - XPath could not be validated.
        - Change 9 may be invalid.
          - XPath could not be validated.
        - Change 10 may be invalid.
          - XPath could not be validated.
        - Change 11 may be invalid.
          - XPath could not be validated.
        - Change 12 may be invalid.
          - XPath could not be validated.
        - Change 13 may be invalid.
          - XPath could not be validated.
        - Change 14 may be invalid.
          - XPath could not be validated.
        - Change 15 may be invalid.
          - XPath could not be validated.
        - Change 16 may be invalid.
          - XPath could not be validated.
        - Change 17 may be invalid.
          - XPath could not be validated.
        - Change 18 may be invalid.
          - XPath could not be validated.
        - Change 19 may be invalid.
          - XPath could not be validated.
        - Change 20 may be invalid.
          - XPath could not be validated.
        - Change 21 may be invalid.
          - XPath could not be validated.
        - Change 22 may be invalid.
          - XPath could not be validated.
        - Change 23 may be invalid.
          - XPath could not be validated.
        - Change 24 may be invalid.
          - XPath could not be validated.
        - Change 25 may be invalid.
          - XPath could not be validated.
        - Change 26 may be invalid.
          - XPath could not be validated.
        - Change 27 may be invalid.
          - XPath could not be validated.
        - Change 28 may be invalid.
          - XPath could not be validated.
        - Change 29 may be invalid.
          - XPath could not be validated.
        - Change 30 may be invalid.
          - XPath could not be validated.
        - Change 31 may be invalid.
          - XPath could not be validated.
        - Change 32 may be invalid.
          - XPath could not be validated.
        - Change 33 may be invalid.
          - XPath could not be validated.
        - Change 34 may be invalid.
          - XPath could not be validated.
        - Change 35 may be invalid.
          - XPath could not be validated.
        - Change 36 may be invalid.
          - XPath could not be validated.
        - Change 37 may be invalid.
          - XPath could not be validated.
        - Change 38 may be invalid.
          - XPath could not be validated.
        - Change 39 may be invalid.
          - XPath could not be validated.
        - Change 40 may be invalid.
          - XPath could not be validated.
        - Change 41 may be invalid.
          - XPath could not be validated.
        - Change 42 may be invalid.
          - XPath could not be validated.
        - Change 43 may be invalid.
          - XPath could not be validated.
        - Change 44 may be invalid.
          - XPath could not be validated.
        - Change 45 may be invalid.
          - XPath could not be validated.
        - Change 46 may be invalid.
          - XPath could not be validated.
        - Change 47 may be invalid.
          - XPath could not be validated.
        - Change 48 may be invalid.
          - XPath could not be validated.
        - Change 49 may be invalid.
          - XPath could not be validated.
        - Change 50 may be invalid.
          - XPath could not be validated.
        - Change 51 may be invalid.
          - XPath could not be validated.
    - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
      - Variable `value_component_environment_variable_time` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_volume_i_variable_volume_i0` may be invalid.
      - Variable `value_component_volume_i_variable_volume_i0` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_volume_i_variable_volume_i` may be invalid.
      - Variable `value_component_volume_i_variable_volume_i` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_volume_er_variable_gamma` may be invalid.
      - Variable `value_component_volume_er_variable_gamma` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_volume_er_variable_volume_er` may be invalid.
      - Variable `value_component_volume_er_variable_volume_er` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_volumeCa_i_variable_volumeCa_i` may be invalid.
      - Variable `value_component_volumeCa_i_variable_volumeCa_i` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Ca_i_variable_Ca_i` may be invalid.
      - Variable `value_component_Ca_i_variable_Ca_i` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_volumeCa_er_variable_volumeCa_er` may be invalid.
      - Variable `value_component_volumeCa_er_variable_volumeCa_er` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Ca_er_variable_Ca_er` may be invalid.
      - Variable `value_component_Ca_er_variable_Ca_er` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_volume_iIP3_variable_volume_iIP3` may be invalid.
      - Variable `value_component_volume_iIP3_variable_volume_iIP3` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_IP3_variable_IP3` may be invalid.
      - Variable `value_component_IP3_variable_IP3` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_PIP2_variable_PIP2` may be invalid.
      - Variable `value_component_PIP2_variable_PIP2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_PIP2_variable_PIP2_Total` may be invalid.
      - Variable `value_component_PIP2_variable_PIP2_Total` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_IPX_variable_IPX` may be invalid.
      - Variable `value_component_IPX_variable_IPX` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_IPX_variable_PIP2_Total` may be invalid.
      - Variable `value_component_IPX_variable_PIP2_Total` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_J_ip3R_variable_J_ip3R` may be invalid.
      - Variable `value_component_J_ip3R_variable_J_ip3R` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_J_ip3R_variable_J_ip3R0` may be invalid.
      - Variable `value_component_J_ip3R_variable_J_ip3R0` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_receptor_variable_ATP_e` may be invalid.
      - Variable `value_component_receptor_variable_ATP_e` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_receptor_variable_V_IP3` may be invalid.
      - Variable `value_component_receptor_variable_V_IP3` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_receptor_variable_MechanicalStimulation` may be invalid.
      - Variable `value_component_receptor_variable_MechanicalStimulation` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_receptor_variable_V_mech` may be invalid.
      - Variable `value_component_receptor_variable_V_mech` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_receptor_variable_V_mech0` may be invalid.
      - Variable `value_component_receptor_variable_V_mech0` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_receptor_variable_C_1` may be invalid.
      - Variable `value_component_receptor_variable_C_1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_receptor_variable_C_2` may be invalid.
      - Variable `value_component_receptor_variable_C_2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_receptor_variable_C_3` may be invalid.
      - Variable `value_component_receptor_variable_C_3` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_receptor_variable_C_4` may be invalid.
      - Variable `value_component_receptor_variable_C_4` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_receptor_variable_V_ATP` may be invalid.
      - Variable `value_component_receptor_variable_V_ATP` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_receptor_variable_K_ATP` may be invalid.
      - Variable `value_component_receptor_variable_K_ATP` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_J_ip3P_variable_J_ip3P` may be invalid.
      - Variable `value_component_J_ip3P_variable_J_ip3P` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_J_ip3D_variable_J_ip3D` may be invalid.
      - Variable `value_component_J_ip3D_variable_J_ip3D` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_J_ip3D_variable_Beta_1` may be invalid.
      - Variable `value_component_J_ip3D_variable_Beta_1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_J_ip3D_variable_Beta_2` may be invalid.
      - Variable `value_component_J_ip3D_variable_Beta_2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_J_ip3D_variable_F_Ca` may be invalid.
      - Variable `value_component_J_ip3D_variable_F_Ca` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_J_ip3D_variable_K_rc` may be invalid.
      - Variable `value_component_J_ip3D_variable_K_rc` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_J_ip3D_variable_K_IP3` may be invalid.
      - Variable `value_component_J_ip3D_variable_K_IP3` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jipt_variable_Jipt` may be invalid.
      - Variable `value_component_Jipt_variable_Jipt` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jipt_variable_Pipt` may be invalid.
      - Variable `value_component_Jipt_variable_Pipt` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jipt_variable_Jipt0` may be invalid.
      - Variable `value_component_Jipt_variable_Jipt0` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jryr_variable_Ka` may be invalid.
      - Variable `value_component_Jryr_variable_Ka` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jryr_variable_Kb` may be invalid.
      - Variable `value_component_Jryr_variable_Kb` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jryr_variable_Kc` may be invalid.
      - Variable `value_component_Jryr_variable_Kc` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jryr_variable_Jryr` may be invalid.
      - Variable `value_component_Jryr_variable_Jryr` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jryr_variable_Jryr0` may be invalid.
      - Variable `value_component_Jryr_variable_Jryr0` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jryr_variable_Pryr` may be invalid.
      - Variable `value_component_Jryr_variable_Pryr` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jryr_variable_W_inf` may be invalid.
      - Variable `value_component_Jryr_variable_W_inf` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jer_variable_Jer` may be invalid.
      - Variable `value_component_Jer_variable_Jer` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jer_variable_Jer0` may be invalid.
      - Variable `value_component_Jer_variable_Jer0` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jserca_variable_Jserca` may be invalid.
      - Variable `value_component_Jserca_variable_Jserca` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jserca_variable_Vserca` may be invalid.
      - Variable `value_component_Jserca_variable_Vserca` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jserca_variable_Kserca` may be invalid.
      - Variable `value_component_Jserca_variable_Kserca` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jin_variable_Jin` may be invalid.
      - Variable `value_component_Jin_variable_Jin` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jin_variable_Vm` may be invalid.
      - Variable `value_component_Jin_variable_Vm` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jin_variable_V_Ca` may be invalid.
      - Variable `value_component_Jin_variable_V_Ca` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jin_variable_R` may be invalid.
      - Variable `value_component_Jin_variable_R` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jin_variable_T` may be invalid.
      - Variable `value_component_Jin_variable_T` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jin_variable_F` may be invalid.
      - Variable `value_component_Jin_variable_F` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jin_variable_z_Ca` may be invalid.
      - Variable `value_component_Jin_variable_z_Ca` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jin_variable_Ca_ext` may be invalid.
      - Variable `value_component_Jin_variable_Ca_ext` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jin_variable_P_pm_1` may be invalid.
      - Variable `value_component_Jin_variable_P_pm_1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jin_variable_P_pm_2` may be invalid.
      - Variable `value_component_Jin_variable_P_pm_2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jin_variable_Iin_1` may be invalid.
      - Variable `value_component_Jin_variable_Iin_1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jin_variable_Iin_2` may be invalid.
      - Variable `value_component_Jin_variable_Iin_2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jin_variable_Jin_1` may be invalid.
      - Variable `value_component_Jin_variable_Jin_1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jin_variable_Jin_2` may be invalid.
      - Variable `value_component_Jin_variable_Jin_2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jpm_variable_Jpm` may be invalid.
      - Variable `value_component_Jpm_variable_Jpm` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jpm_variable_Vpm` may be invalid.
      - Variable `value_component_Jpm_variable_Vpm` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Jpm_variable_Kpm` may be invalid.
      - Variable `value_component_Jpm_variable_Kpm` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_O_variable_O` may be invalid.
      - Variable `value_component_O_variable_O` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_O_variable_S` may be invalid.
      - Variable `value_component_O_variable_S` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_I1_variable_I1` may be invalid.
      - Variable `value_component_I1_variable_I1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_I2_variable_I2` may be invalid.
      - Variable `value_component_I2_variable_I2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_constants_variable_k1` may be invalid.
      - Variable `value_component_constants_variable_k1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_constants_variable_k1_` may be invalid.
      - Variable `value_component_constants_variable_k1_` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_constants_variable_k2` may be invalid.
      - Variable `value_component_constants_variable_k2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_constants_variable_k3` may be invalid.
      - Variable `value_component_constants_variable_k3` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_constants_variable_k4` may be invalid.
      - Variable `value_component_constants_variable_k4` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_constants_variable_k5` may be invalid.
      - Variable `value_component_constants_variable_k5` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_constants_variable_alpha_1` may be invalid.
      - Variable `value_component_constants_variable_alpha_1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_constants_variable_beta_1` may be invalid.
      - Variable `value_component_constants_variable_beta_1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_constants_variable_alpha_4` may be invalid.
      - Variable `value_component_constants_variable_alpha_4` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_constants_variable_beta_4` may be invalid.
      - Variable `value_component_constants_variable_beta_4` may be invalid.
        - XPath could not be validated.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
Archive contains 1 SED-ML documents with 1 models, 1 simulations, 1 tasks, 1 reports, and 0 plots:
  simulation_0.sedml:
    Tasks (1):
      task
    Reports (1):
      report: 81 data sets

Executing SED-ML file 1: simulation_0.sedml ...

Bundling outputs ...
Cleaning up ...

============= SUMMARY =============
Executed 1 SED documents:
  SED documents (1):
    Succeeded: 1
    Skipped: 0
    Failed: 0
  Tasks (1):
    Succeeded: 1
    Skipped: 0
    Failed: 0
  Outputs (1):
    Succeeded: 1
    Skipped: 0
    Failed: 0


[0;36m===================================================== Saving log ====================================================[0m
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upload: ./rawLog.txt to s3://files.biosimulations.org/simulations/626178ccabe612c540c69624/rawLog.txt
Completed 60.7 KiB/60.7 KiB (416.2 KiB/s) with 1 file(s) remaining
upload: outputs/log.yml to s3://files.biosimulations.org/simulations/626178ccabe612c540c69624/outputs/log.yml

[0;36m================================================== Zipping outputs ==================================================[0m
  adding: outputs/ (stored 0%)
