[0;36mThank you for using runBioSimulations![0m

[0;36m================================================ Loading Singularity ================================================[0m

[0;36m=================================================== Set up storage ==================================================[0m

[0;36m========================================== Downloading COMBINE/OMEX archive =========================================[0m
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100   139  100   139    0     0    456      0 --:--:-- --:--:-- --:--:--   455
100   139  100   139    0     0    451      0 --:--:-- --:--:-- --:--:--   451

100 1304k  100 1304k    0     0  2742k      0 --:--:-- --:--:-- --:--:-- 2742k

[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================[0m
INFO:    Using cached SIF image
Traceback (most recent call last):
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 247, in <module>
    if not update_paths(args.path, args.scripts_dir, args.clear_args, args.extra_args):
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 213, in update_paths
    update_scripts(scripts_dir, new_path, clear_args, extra_args)
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 125, in update_scripts
    update_script(os.path.join(bin_dir, fn), new_path, clear_args, extra_args)
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 118, in update_script
    with open(script_filename, 'w') as f:
OSError: [Errno 30] Read-only file system: '/home/opencor/OpenCOR/bin/../python/bin/biosimulators-utils'
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mCOMBINE/OMEX archive may be invalid.
  - The manifest does not include its parent COMBINE/OMEX archive. Manifests should include their parent COMBINE/OMEX archives.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe SED document is potentially incorrect.
  - Model `model` may be invalid.
    - The changes of the model may be invalid.
      - Change 1 may be invalid.
        - XPath could not be validated.
      - Change 2 may be invalid.
        - XPath could not be validated.
      - Change 3 may be invalid.
        - XPath could not be validated.
      - Change 4 may be invalid.
        - XPath could not be validated.
      - Change 5 may be invalid.
        - XPath could not be validated.
      - Change 6 may be invalid.
        - XPath could not be validated.
      - Change 7 may be invalid.
        - XPath could not be validated.
      - Change 8 may be invalid.
        - XPath could not be validated.
      - Change 9 may be invalid.
        - XPath could not be validated.
      - Change 10 may be invalid.
        - XPath could not be validated.
      - Change 11 may be invalid.
        - XPath could not be validated.
      - Change 12 may be invalid.
        - XPath could not be validated.
      - Change 13 may be invalid.
        - XPath could not be validated.
      - Change 14 may be invalid.
        - XPath could not be validated.
      - Change 15 may be invalid.
        - XPath could not be validated.
      - Change 16 may be invalid.
        - XPath could not be validated.
      - Change 17 may be invalid.
        - XPath could not be validated.
      - Change 18 may be invalid.
        - XPath could not be validated.
      - Change 19 may be invalid.
        - XPath could not be validated.
      - Change 20 may be invalid.
        - XPath could not be validated.
      - Change 21 may be invalid.
        - XPath could not be validated.
      - Change 22 may be invalid.
        - XPath could not be validated.
      - Change 23 may be invalid.
        - XPath could not be validated.
      - Change 24 may be invalid.
        - XPath could not be validated.
      - Change 25 may be invalid.
        - XPath could not be validated.
      - Change 26 may be invalid.
        - XPath could not be validated.
      - Change 27 may be invalid.
        - XPath could not be validated.
      - Change 28 may be invalid.
        - XPath could not be validated.
      - Change 29 may be invalid.
        - XPath could not be validated.
      - Change 30 may be invalid.
        - XPath could not be validated.
      - Change 31 may be invalid.
        - XPath could not be validated.
      - Change 32 may be invalid.
        - XPath could not be validated.
      - Change 33 may be invalid.
        - XPath could not be validated.
      - Change 34 may be invalid.
        - XPath could not be validated.
  - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
    - Variable `value_component_environment_variable_time` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_G_a_variable_G_a` may be invalid.
    - Variable `value_component_G_a_variable_G_a` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_PLC_variable_PLC` may be invalid.
    - Variable `value_component_PLC_variable_PLC` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Ca_ER_variable_Ca_ER` may be invalid.
    - Variable `value_component_Ca_ER_variable_Ca_ER` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Ca_mit_variable_Ca_mit` may be invalid.
    - Variable `value_component_Ca_mit_variable_Ca_mit` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Ca_cyt_variable_Ca_cyt` may be invalid.
    - Variable `value_component_Ca_cyt_variable_Ca_cyt` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Enz_variable_Enz` may be invalid.
    - Variable `value_component_Enz_variable_Enz` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Enz_variable_k_act` may be invalid.
    - Variable `value_component_Enz_variable_k_act` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Enz_variable_K_M` may be invalid.
    - Variable `value_component_Enz_variable_K_M` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Enz_variable_k_inact` may be invalid.
    - Variable `value_component_Enz_variable_k_inact` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Enz_variable_p` may be invalid.
    - Variable `value_component_Enz_variable_p` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Pro_variable_Pro` may be invalid.
    - Variable `value_component_Pro_variable_Pro` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Pro_variable_k_enz` may be invalid.
    - Variable `value_component_Pro_variable_k_enz` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Pro_variable_k_rem` may be invalid.
    - Variable `value_component_Pro_variable_k_rem` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k1` may be invalid.
    - Variable `value_component_model_parameters_variable_k1` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k2` may be invalid.
    - Variable `value_component_model_parameters_variable_k2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k3` may be invalid.
    - Variable `value_component_model_parameters_variable_k3` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_K4` may be invalid.
    - Variable `value_component_model_parameters_variable_K4` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k5` may be invalid.
    - Variable `value_component_model_parameters_variable_k5` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_K6` may be invalid.
    - Variable `value_component_model_parameters_variable_K6` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k7` may be invalid.
    - Variable `value_component_model_parameters_variable_k7` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k8` may be invalid.
    - Variable `value_component_model_parameters_variable_k8` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_K9` may be invalid.
    - Variable `value_component_model_parameters_variable_K9` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k10` may be invalid.
    - Variable `value_component_model_parameters_variable_k10` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_K11` may be invalid.
    - Variable `value_component_model_parameters_variable_K11` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k12` may be invalid.
    - Variable `value_component_model_parameters_variable_k12` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k13` may be invalid.
    - Variable `value_component_model_parameters_variable_k13` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k14` may be invalid.
    - Variable `value_component_model_parameters_variable_k14` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_K15` may be invalid.
    - Variable `value_component_model_parameters_variable_K15` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k16` may be invalid.
    - Variable `value_component_model_parameters_variable_k16` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_K17` may be invalid.
    - Variable `value_component_model_parameters_variable_K17` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k18` may be invalid.
    - Variable `value_component_model_parameters_variable_k18` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_K19` may be invalid.
    - Variable `value_component_model_parameters_variable_K19` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k20` may be invalid.
    - Variable `value_component_model_parameters_variable_k20` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_K21` may be invalid.
    - Variable `value_component_model_parameters_variable_K21` may be invalid.
      - XPath could not be validated.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe SED document is potentially incorrect.
  - Model `model` may be invalid.
    - The changes of the model may be invalid.
      - Change 1 may be invalid.
        - XPath could not be validated.
      - Change 2 may be invalid.
        - XPath could not be validated.
      - Change 3 may be invalid.
        - XPath could not be validated.
      - Change 4 may be invalid.
        - XPath could not be validated.
      - Change 5 may be invalid.
        - XPath could not be validated.
      - Change 6 may be invalid.
        - XPath could not be validated.
      - Change 7 may be invalid.
        - XPath could not be validated.
      - Change 8 may be invalid.
        - XPath could not be validated.
      - Change 9 may be invalid.
        - XPath could not be validated.
      - Change 10 may be invalid.
        - XPath could not be validated.
      - Change 11 may be invalid.
        - XPath could not be validated.
      - Change 12 may be invalid.
        - XPath could not be validated.
      - Change 13 may be invalid.
        - XPath could not be validated.
      - Change 14 may be invalid.
        - XPath could not be validated.
      - Change 15 may be invalid.
        - XPath could not be validated.
      - Change 16 may be invalid.
        - XPath could not be validated.
      - Change 17 may be invalid.
        - XPath could not be validated.
      - Change 18 may be invalid.
        - XPath could not be validated.
      - Change 19 may be invalid.
        - XPath could not be validated.
      - Change 20 may be invalid.
        - XPath could not be validated.
      - Change 21 may be invalid.
        - XPath could not be validated.
      - Change 22 may be invalid.
        - XPath could not be validated.
      - Change 23 may be invalid.
        - XPath could not be validated.
      - Change 24 may be invalid.
        - XPath could not be validated.
      - Change 25 may be invalid.
        - XPath could not be validated.
      - Change 26 may be invalid.
        - XPath could not be validated.
  - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
    - Variable `value_component_environment_variable_time` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_G_a_variable_G_a` may be invalid.
    - Variable `value_component_G_a_variable_G_a` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_PLC_variable_PLC` may be invalid.
    - Variable `value_component_PLC_variable_PLC` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Ca_ER_variable_Ca_ER` may be invalid.
    - Variable `value_component_Ca_ER_variable_Ca_ER` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Ca_mit_variable_Ca_mit` may be invalid.
    - Variable `value_component_Ca_mit_variable_Ca_mit` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Ca_cyt_variable_Ca_cyt` may be invalid.
    - Variable `value_component_Ca_cyt_variable_Ca_cyt` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k1` may be invalid.
    - Variable `value_component_model_parameters_variable_k1` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k2` may be invalid.
    - Variable `value_component_model_parameters_variable_k2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k3` may be invalid.
    - Variable `value_component_model_parameters_variable_k3` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_K4` may be invalid.
    - Variable `value_component_model_parameters_variable_K4` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k5` may be invalid.
    - Variable `value_component_model_parameters_variable_k5` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_K6` may be invalid.
    - Variable `value_component_model_parameters_variable_K6` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k7` may be invalid.
    - Variable `value_component_model_parameters_variable_k7` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k8` may be invalid.
    - Variable `value_component_model_parameters_variable_k8` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_K9` may be invalid.
    - Variable `value_component_model_parameters_variable_K9` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k10` may be invalid.
    - Variable `value_component_model_parameters_variable_k10` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_K11` may be invalid.
    - Variable `value_component_model_parameters_variable_K11` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k12` may be invalid.
    - Variable `value_component_model_parameters_variable_k12` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k13` may be invalid.
    - Variable `value_component_model_parameters_variable_k13` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k14` may be invalid.
    - Variable `value_component_model_parameters_variable_k14` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_K15` may be invalid.
    - Variable `value_component_model_parameters_variable_K15` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k16` may be invalid.
    - Variable `value_component_model_parameters_variable_k16` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_K17` may be invalid.
    - Variable `value_component_model_parameters_variable_K17` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k18` may be invalid.
    - Variable `value_component_model_parameters_variable_k18` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_K19` may be invalid.
    - Variable `value_component_model_parameters_variable_K19` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_k20` may be invalid.
    - Variable `value_component_model_parameters_variable_k20` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_model_parameters_variable_K21` may be invalid.
    - Variable `value_component_model_parameters_variable_K21` may be invalid.
      - XPath could not be validated.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe COMBINE/OMEX archive may be invalid.
  - The SED-ML file at location `simulation_0.sedml` may be invalid.
    - Model `model` may be invalid.
      - The changes of the model may be invalid.
        - Change 1 may be invalid.
          - XPath could not be validated.
        - Change 2 may be invalid.
          - XPath could not be validated.
        - Change 3 may be invalid.
          - XPath could not be validated.
        - Change 4 may be invalid.
          - XPath could not be validated.
        - Change 5 may be invalid.
          - XPath could not be validated.
        - Change 6 may be invalid.
          - XPath could not be validated.
        - Change 7 may be invalid.
          - XPath could not be validated.
        - Change 8 may be invalid.
          - XPath could not be validated.
        - Change 9 may be invalid.
          - XPath could not be validated.
        - Change 10 may be invalid.
          - XPath could not be validated.
        - Change 11 may be invalid.
          - XPath could not be validated.
        - Change 12 may be invalid.
          - XPath could not be validated.
        - Change 13 may be invalid.
          - XPath could not be validated.
        - Change 14 may be invalid.
          - XPath could not be validated.
        - Change 15 may be invalid.
          - XPath could not be validated.
        - Change 16 may be invalid.
          - XPath could not be validated.
        - Change 17 may be invalid.
          - XPath could not be validated.
        - Change 18 may be invalid.
          - XPath could not be validated.
        - Change 19 may be invalid.
          - XPath could not be validated.
        - Change 20 may be invalid.
          - XPath could not be validated.
        - Change 21 may be invalid.
          - XPath could not be validated.
        - Change 22 may be invalid.
          - XPath could not be validated.
        - Change 23 may be invalid.
          - XPath could not be validated.
        - Change 24 may be invalid.
          - XPath could not be validated.
        - Change 25 may be invalid.
          - XPath could not be validated.
        - Change 26 may be invalid.
          - XPath could not be validated.
        - Change 27 may be invalid.
          - XPath could not be validated.
        - Change 28 may be invalid.
          - XPath could not be validated.
        - Change 29 may be invalid.
          - XPath could not be validated.
        - Change 30 may be invalid.
          - XPath could not be validated.
        - Change 31 may be invalid.
          - XPath could not be validated.
        - Change 32 may be invalid.
          - XPath could not be validated.
        - Change 33 may be invalid.
          - XPath could not be validated.
        - Change 34 may be invalid.
          - XPath could not be validated.
    - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
      - Variable `value_component_environment_variable_time` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_G_a_variable_G_a` may be invalid.
      - Variable `value_component_G_a_variable_G_a` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_PLC_variable_PLC` may be invalid.
      - Variable `value_component_PLC_variable_PLC` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Ca_ER_variable_Ca_ER` may be invalid.
      - Variable `value_component_Ca_ER_variable_Ca_ER` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Ca_mit_variable_Ca_mit` may be invalid.
      - Variable `value_component_Ca_mit_variable_Ca_mit` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Ca_cyt_variable_Ca_cyt` may be invalid.
      - Variable `value_component_Ca_cyt_variable_Ca_cyt` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Enz_variable_Enz` may be invalid.
      - Variable `value_component_Enz_variable_Enz` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Enz_variable_k_act` may be invalid.
      - Variable `value_component_Enz_variable_k_act` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Enz_variable_K_M` may be invalid.
      - Variable `value_component_Enz_variable_K_M` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Enz_variable_k_inact` may be invalid.
      - Variable `value_component_Enz_variable_k_inact` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Enz_variable_p` may be invalid.
      - Variable `value_component_Enz_variable_p` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Pro_variable_Pro` may be invalid.
      - Variable `value_component_Pro_variable_Pro` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Pro_variable_k_enz` may be invalid.
      - Variable `value_component_Pro_variable_k_enz` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Pro_variable_k_rem` may be invalid.
      - Variable `value_component_Pro_variable_k_rem` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k1` may be invalid.
      - Variable `value_component_model_parameters_variable_k1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k2` may be invalid.
      - Variable `value_component_model_parameters_variable_k2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k3` may be invalid.
      - Variable `value_component_model_parameters_variable_k3` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K4` may be invalid.
      - Variable `value_component_model_parameters_variable_K4` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k5` may be invalid.
      - Variable `value_component_model_parameters_variable_k5` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K6` may be invalid.
      - Variable `value_component_model_parameters_variable_K6` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k7` may be invalid.
      - Variable `value_component_model_parameters_variable_k7` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k8` may be invalid.
      - Variable `value_component_model_parameters_variable_k8` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K9` may be invalid.
      - Variable `value_component_model_parameters_variable_K9` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k10` may be invalid.
      - Variable `value_component_model_parameters_variable_k10` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K11` may be invalid.
      - Variable `value_component_model_parameters_variable_K11` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k12` may be invalid.
      - Variable `value_component_model_parameters_variable_k12` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k13` may be invalid.
      - Variable `value_component_model_parameters_variable_k13` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k14` may be invalid.
      - Variable `value_component_model_parameters_variable_k14` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K15` may be invalid.
      - Variable `value_component_model_parameters_variable_K15` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k16` may be invalid.
      - Variable `value_component_model_parameters_variable_k16` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K17` may be invalid.
      - Variable `value_component_model_parameters_variable_K17` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k18` may be invalid.
      - Variable `value_component_model_parameters_variable_k18` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K19` may be invalid.
      - Variable `value_component_model_parameters_variable_K19` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k20` may be invalid.
      - Variable `value_component_model_parameters_variable_k20` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K21` may be invalid.
      - Variable `value_component_model_parameters_variable_K21` may be invalid.
        - XPath could not be validated.
  - The SED-ML file at location `simulation_1.sedml` may be invalid.
    - Model `model` may be invalid.
      - The changes of the model may be invalid.
        - Change 1 may be invalid.
          - XPath could not be validated.
        - Change 2 may be invalid.
          - XPath could not be validated.
        - Change 3 may be invalid.
          - XPath could not be validated.
        - Change 4 may be invalid.
          - XPath could not be validated.
        - Change 5 may be invalid.
          - XPath could not be validated.
        - Change 6 may be invalid.
          - XPath could not be validated.
        - Change 7 may be invalid.
          - XPath could not be validated.
        - Change 8 may be invalid.
          - XPath could not be validated.
        - Change 9 may be invalid.
          - XPath could not be validated.
        - Change 10 may be invalid.
          - XPath could not be validated.
        - Change 11 may be invalid.
          - XPath could not be validated.
        - Change 12 may be invalid.
          - XPath could not be validated.
        - Change 13 may be invalid.
          - XPath could not be validated.
        - Change 14 may be invalid.
          - XPath could not be validated.
        - Change 15 may be invalid.
          - XPath could not be validated.
        - Change 16 may be invalid.
          - XPath could not be validated.
        - Change 17 may be invalid.
          - XPath could not be validated.
        - Change 18 may be invalid.
          - XPath could not be validated.
        - Change 19 may be invalid.
          - XPath could not be validated.
        - Change 20 may be invalid.
          - XPath could not be validated.
        - Change 21 may be invalid.
          - XPath could not be validated.
        - Change 22 may be invalid.
          - XPath could not be validated.
        - Change 23 may be invalid.
          - XPath could not be validated.
        - Change 24 may be invalid.
          - XPath could not be validated.
        - Change 25 may be invalid.
          - XPath could not be validated.
        - Change 26 may be invalid.
          - XPath could not be validated.
    - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
      - Variable `value_component_environment_variable_time` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_G_a_variable_G_a` may be invalid.
      - Variable `value_component_G_a_variable_G_a` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_PLC_variable_PLC` may be invalid.
      - Variable `value_component_PLC_variable_PLC` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Ca_ER_variable_Ca_ER` may be invalid.
      - Variable `value_component_Ca_ER_variable_Ca_ER` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Ca_mit_variable_Ca_mit` may be invalid.
      - Variable `value_component_Ca_mit_variable_Ca_mit` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Ca_cyt_variable_Ca_cyt` may be invalid.
      - Variable `value_component_Ca_cyt_variable_Ca_cyt` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k1` may be invalid.
      - Variable `value_component_model_parameters_variable_k1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k2` may be invalid.
      - Variable `value_component_model_parameters_variable_k2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k3` may be invalid.
      - Variable `value_component_model_parameters_variable_k3` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K4` may be invalid.
      - Variable `value_component_model_parameters_variable_K4` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k5` may be invalid.
      - Variable `value_component_model_parameters_variable_k5` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K6` may be invalid.
      - Variable `value_component_model_parameters_variable_K6` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k7` may be invalid.
      - Variable `value_component_model_parameters_variable_k7` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k8` may be invalid.
      - Variable `value_component_model_parameters_variable_k8` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K9` may be invalid.
      - Variable `value_component_model_parameters_variable_K9` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k10` may be invalid.
      - Variable `value_component_model_parameters_variable_k10` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K11` may be invalid.
      - Variable `value_component_model_parameters_variable_K11` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k12` may be invalid.
      - Variable `value_component_model_parameters_variable_k12` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k13` may be invalid.
      - Variable `value_component_model_parameters_variable_k13` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k14` may be invalid.
      - Variable `value_component_model_parameters_variable_k14` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K15` may be invalid.
      - Variable `value_component_model_parameters_variable_K15` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k16` may be invalid.
      - Variable `value_component_model_parameters_variable_k16` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K17` may be invalid.
      - Variable `value_component_model_parameters_variable_K17` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k18` may be invalid.
      - Variable `value_component_model_parameters_variable_k18` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K19` may be invalid.
      - Variable `value_component_model_parameters_variable_K19` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k20` may be invalid.
      - Variable `value_component_model_parameters_variable_k20` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K21` may be invalid.
      - Variable `value_component_model_parameters_variable_K21` may be invalid.
        - XPath could not be validated.
  - The SED-ML file at location `simulation_2.sedml` may be invalid.
    - Model `model` may be invalid.
      - The changes of the model may be invalid.
        - Change 1 may be invalid.
          - XPath could not be validated.
        - Change 2 may be invalid.
          - XPath could not be validated.
        - Change 3 may be invalid.
          - XPath could not be validated.
        - Change 4 may be invalid.
          - XPath could not be validated.
        - Change 5 may be invalid.
          - XPath could not be validated.
        - Change 6 may be invalid.
          - XPath could not be validated.
        - Change 7 may be invalid.
          - XPath could not be validated.
        - Change 8 may be invalid.
          - XPath could not be validated.
        - Change 9 may be invalid.
          - XPath could not be validated.
        - Change 10 may be invalid.
          - XPath could not be validated.
        - Change 11 may be invalid.
          - XPath could not be validated.
        - Change 12 may be invalid.
          - XPath could not be validated.
        - Change 13 may be invalid.
          - XPath could not be validated.
        - Change 14 may be invalid.
          - XPath could not be validated.
        - Change 15 may be invalid.
          - XPath could not be validated.
        - Change 16 may be invalid.
          - XPath could not be validated.
        - Change 17 may be invalid.
          - XPath could not be validated.
        - Change 18 may be invalid.
          - XPath could not be validated.
        - Change 19 may be invalid.
          - XPath could not be validated.
        - Change 20 may be invalid.
          - XPath could not be validated.
        - Change 21 may be invalid.
          - XPath could not be validated.
        - Change 22 may be invalid.
          - XPath could not be validated.
        - Change 23 may be invalid.
          - XPath could not be validated.
        - Change 24 may be invalid.
          - XPath could not be validated.
        - Change 25 may be invalid.
          - XPath could not be validated.
        - Change 26 may be invalid.
          - XPath could not be validated.
        - Change 27 may be invalid.
          - XPath could not be validated.
        - Change 28 may be invalid.
          - XPath could not be validated.
        - Change 29 may be invalid.
          - XPath could not be validated.
        - Change 30 may be invalid.
          - XPath could not be validated.
        - Change 31 may be invalid.
          - XPath could not be validated.
        - Change 32 may be invalid.
          - XPath could not be validated.
        - Change 33 may be invalid.
          - XPath could not be validated.
        - Change 34 may be invalid.
          - XPath could not be validated.
    - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
      - Variable `value_component_environment_variable_time` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_G_a_variable_G_a` may be invalid.
      - Variable `value_component_G_a_variable_G_a` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_PLC_variable_PLC` may be invalid.
      - Variable `value_component_PLC_variable_PLC` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Ca_ER_variable_Ca_ER` may be invalid.
      - Variable `value_component_Ca_ER_variable_Ca_ER` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Ca_mit_variable_Ca_mit` may be invalid.
      - Variable `value_component_Ca_mit_variable_Ca_mit` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Ca_cyt_variable_Ca_cyt` may be invalid.
      - Variable `value_component_Ca_cyt_variable_Ca_cyt` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Enz_variable_Enz` may be invalid.
      - Variable `value_component_Enz_variable_Enz` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Enz_variable_k_act` may be invalid.
      - Variable `value_component_Enz_variable_k_act` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Enz_variable_K_M` may be invalid.
      - Variable `value_component_Enz_variable_K_M` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Enz_variable_k_inact` may be invalid.
      - Variable `value_component_Enz_variable_k_inact` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Enz_variable_p` may be invalid.
      - Variable `value_component_Enz_variable_p` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Pro_variable_Pro` may be invalid.
      - Variable `value_component_Pro_variable_Pro` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Pro_variable_k_enz` may be invalid.
      - Variable `value_component_Pro_variable_k_enz` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Pro_variable_k_rem` may be invalid.
      - Variable `value_component_Pro_variable_k_rem` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k1` may be invalid.
      - Variable `value_component_model_parameters_variable_k1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k2` may be invalid.
      - Variable `value_component_model_parameters_variable_k2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k3` may be invalid.
      - Variable `value_component_model_parameters_variable_k3` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K4` may be invalid.
      - Variable `value_component_model_parameters_variable_K4` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k5` may be invalid.
      - Variable `value_component_model_parameters_variable_k5` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K6` may be invalid.
      - Variable `value_component_model_parameters_variable_K6` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k7` may be invalid.
      - Variable `value_component_model_parameters_variable_k7` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k8` may be invalid.
      - Variable `value_component_model_parameters_variable_k8` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K9` may be invalid.
      - Variable `value_component_model_parameters_variable_K9` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k10` may be invalid.
      - Variable `value_component_model_parameters_variable_k10` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K11` may be invalid.
      - Variable `value_component_model_parameters_variable_K11` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k12` may be invalid.
      - Variable `value_component_model_parameters_variable_k12` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k13` may be invalid.
      - Variable `value_component_model_parameters_variable_k13` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k14` may be invalid.
      - Variable `value_component_model_parameters_variable_k14` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K15` may be invalid.
      - Variable `value_component_model_parameters_variable_K15` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k16` may be invalid.
      - Variable `value_component_model_parameters_variable_k16` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K17` may be invalid.
      - Variable `value_component_model_parameters_variable_K17` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k18` may be invalid.
      - Variable `value_component_model_parameters_variable_k18` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K19` may be invalid.
      - Variable `value_component_model_parameters_variable_K19` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_k20` may be invalid.
      - Variable `value_component_model_parameters_variable_k20` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_model_parameters_variable_K21` may be invalid.
      - Variable `value_component_model_parameters_variable_K21` may be invalid.
        - XPath could not be validated.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
Archive contains 3 SED-ML documents with 3 models, 3 simulations, 3 tasks, 3 reports, and 0 plots:
  simulation_0.sedml:
    Tasks (1):
      task
    Reports (1):
      report: 35 data sets
  simulation_1.sedml:
    Tasks (1):
      task
    Reports (1):
      report: 27 data sets
  simulation_2.sedml:
    Tasks (1):
      task
    Reports (1):
      report: 35 data sets

Executing SED-ML file 1: simulation_0.sedml ...
Executing SED-ML file 2: simulation_1.sedml ...
Executing SED-ML file 3: simulation_2.sedml ...

Bundling outputs ...
Cleaning up ...

============= SUMMARY =============
Executed 3 SED documents:
  SED documents (3):
    Succeeded: 3
    Skipped: 0
    Failed: 0
  Tasks (3):
    Succeeded: 3
    Skipped: 0
    Failed: 0
  Outputs (3):
    Succeeded: 3
    Skipped: 0
    Failed: 0


[0;36m===================================================== Saving log ====================================================[0m
Completed 48.7 KiB/48.7 KiB (473.0 KiB/s) with 1 file(s) remaining
upload: ./rawLog.txt to s3://files.biosimulations.org/simulations/6261770290c6a195955792f0/rawLog.txt
Completed 73.3 KiB/73.3 KiB (517.0 KiB/s) with 1 file(s) remaining
upload: outputs/log.yml to s3://files.biosimulations.org/simulations/6261770290c6a195955792f0/outputs/log.yml

[0;36m================================================== Zipping outputs ==================================================[0m
  adding: outputs/ (stored 0%)
