[0;36mThank you for using runBioSimulations![0m

[0;36m================================================ Loading Singularity ================================================[0m

[0;36m=================================================== Set up storage ==================================================[0m

[0;36m========================================== Downloading COMBINE/OMEX archive =========================================[0m
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100   139  100   139    0     0    467      0 --:--:-- --:--:-- --:--:--   469

  0 1189k    0   481    0     0   1118      0  0:18:09 --:--:--  0:18:09  1118
100 1189k  100 1189k    0     0  2532k      0 --:--:-- --:--:-- --:--:-- 29.7M

[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================[0m
INFO:    Using cached SIF image
Traceback (most recent call last):
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 247, in <module>
    if not update_paths(args.path, args.scripts_dir, args.clear_args, args.extra_args):
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 213, in update_paths
    update_scripts(scripts_dir, new_path, clear_args, extra_args)
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 125, in update_scripts
    update_script(os.path.join(bin_dir, fn), new_path, clear_args, extra_args)
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 118, in update_script
    with open(script_filename, 'w') as f:
OSError: [Errno 30] Read-only file system: '/home/opencor/OpenCOR/bin/../python/bin/biosimulators-utils'
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mCOMBINE/OMEX archive may be invalid.
  - The manifest does not include its parent COMBINE/OMEX archive. Manifests should include their parent COMBINE/OMEX archives.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe SED document is potentially incorrect.
  - Model `model` may be invalid.
    - The changes of the model may be invalid.
      - Change 1 may be invalid.
        - XPath could not be validated.
      - Change 2 may be invalid.
        - XPath could not be validated.
      - Change 3 may be invalid.
        - XPath could not be validated.
      - Change 4 may be invalid.
        - XPath could not be validated.
      - Change 5 may be invalid.
        - XPath could not be validated.
      - Change 6 may be invalid.
        - XPath could not be validated.
      - Change 7 may be invalid.
        - XPath could not be validated.
      - Change 8 may be invalid.
        - XPath could not be validated.
      - Change 9 may be invalid.
        - XPath could not be validated.
      - Change 10 may be invalid.
        - XPath could not be validated.
      - Change 11 may be invalid.
        - XPath could not be validated.
      - Change 12 may be invalid.
        - XPath could not be validated.
      - Change 13 may be invalid.
        - XPath could not be validated.
      - Change 14 may be invalid.
        - XPath could not be validated.
      - Change 15 may be invalid.
        - XPath could not be validated.
      - Change 16 may be invalid.
        - XPath could not be validated.
      - Change 17 may be invalid.
        - XPath could not be validated.
      - Change 18 may be invalid.
        - XPath could not be validated.
      - Change 19 may be invalid.
        - XPath could not be validated.
      - Change 20 may be invalid.
        - XPath could not be validated.
      - Change 21 may be invalid.
        - XPath could not be validated.
      - Change 22 may be invalid.
        - XPath could not be validated.
      - Change 23 may be invalid.
        - XPath could not be validated.
      - Change 24 may be invalid.
        - XPath could not be validated.
      - Change 25 may be invalid.
        - XPath could not be validated.
      - Change 26 may be invalid.
        - XPath could not be validated.
      - Change 27 may be invalid.
        - XPath could not be validated.
      - Change 28 may be invalid.
        - XPath could not be validated.
      - Change 29 may be invalid.
        - XPath could not be validated.
      - Change 30 may be invalid.
        - XPath could not be validated.
      - Change 31 may be invalid.
        - XPath could not be validated.
      - Change 32 may be invalid.
        - XPath could not be validated.
      - Change 33 may be invalid.
        - XPath could not be validated.
      - Change 34 may be invalid.
        - XPath could not be validated.
      - Change 35 may be invalid.
        - XPath could not be validated.
      - Change 36 may be invalid.
        - XPath could not be validated.
      - Change 37 may be invalid.
        - XPath could not be validated.
      - Change 38 may be invalid.
        - XPath could not be validated.
      - Change 39 may be invalid.
        - XPath could not be validated.
      - Change 40 may be invalid.
        - XPath could not be validated.
      - Change 41 may be invalid.
        - XPath could not be validated.
      - Change 42 may be invalid.
        - XPath could not be validated.
      - Change 43 may be invalid.
        - XPath could not be validated.
  - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
    - Variable `value_component_environment_variable_time` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_R_T` may be invalid.
    - Variable `value_component_Parameters_variable_R_T` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_K_1` may be invalid.
    - Variable `value_component_Parameters_variable_K_1` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_K_2` may be invalid.
    - Variable `value_component_Parameters_variable_K_2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_k_r` may be invalid.
    - Variable `value_component_Parameters_variable_k_r` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_k_p` may be invalid.
    - Variable `value_component_Parameters_variable_k_p` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_k_e` may be invalid.
    - Variable `value_component_Parameters_variable_k_e` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_xi` may be invalid.
    - Variable `value_component_Parameters_variable_xi` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_G_T` may be invalid.
    - Variable `value_component_Parameters_variable_G_T` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_k_deg` may be invalid.
    - Variable `value_component_Parameters_variable_k_deg` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_k_a` may be invalid.
    - Variable `value_component_Parameters_variable_k_a` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_k_d` may be invalid.
    - Variable `value_component_Parameters_variable_k_d` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_PIP_2_T` may be invalid.
    - Variable `value_component_Parameters_variable_PIP_2_T` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_r_r` may be invalid.
    - Variable `value_component_Parameters_variable_r_r` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_delta` may be invalid.
    - Variable `value_component_Parameters_variable_delta` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_K_c` may be invalid.
    - Variable `value_component_Parameters_variable_K_c` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_alpha` may be invalid.
    - Variable `value_component_Parameters_variable_alpha` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_N_a` may be invalid.
    - Variable `value_component_Parameters_variable_N_a` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_v` may be invalid.
    - Variable `value_component_Parameters_variable_v` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_epsilon_r` may be invalid.
    - Variable `value_component_Parameters_variable_epsilon_r` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_d_1` may be invalid.
    - Variable `value_component_Parameters_variable_d_1` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_d_2` may be invalid.
    - Variable `value_component_Parameters_variable_d_2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_d_3` may be invalid.
    - Variable `value_component_Parameters_variable_d_3` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_d_5` may be invalid.
    - Variable `value_component_Parameters_variable_d_5` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_a_2` may be invalid.
    - Variable `value_component_Parameters_variable_a_2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_B_e` may be invalid.
    - Variable `value_component_Parameters_variable_B_e` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_K_e` may be invalid.
    - Variable `value_component_Parameters_variable_K_e` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_B_ER` may be invalid.
    - Variable `value_component_Parameters_variable_B_ER` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_K_ER` may be invalid.
    - Variable `value_component_Parameters_variable_K_ER` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_B_x` may be invalid.
    - Variable `value_component_Parameters_variable_B_x` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_K_x` may be invalid.
    - Variable `value_component_Parameters_variable_K_x` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_k_3` may be invalid.
    - Variable `value_component_Parameters_variable_k_3` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_eta_1` may be invalid.
    - Variable `value_component_Parameters_variable_eta_1` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_eta_2` may be invalid.
    - Variable `value_component_Parameters_variable_eta_2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_eta_3` may be invalid.
    - Variable `value_component_Parameters_variable_eta_3` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_Parameters_variable_C_T` may be invalid.
    - Variable `value_component_Parameters_variable_C_T` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_ligand_variable_L` may be invalid.
    - Variable `value_component_ligand_variable_L` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_RS_variable_RS` may be invalid.
    - Variable `value_component_RS_variable_RS` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_RS_p_variable_RS_p` may be invalid.
    - Variable `value_component_RS_p_variable_RS_p` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_G_GTP_variable_G` may be invalid.
    - Variable `value_component_G_GTP_variable_G` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_IP_3_variable_IP_3` may be invalid.
    - Variable `value_component_IP_3_variable_IP_3` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_PIP_2_variable_PIP_2` may be invalid.
    - Variable `value_component_PIP_2_variable_PIP_2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_r_h_variable_r_h` may be invalid.
    - Variable `value_component_r_h_variable_r_h` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rho_r_variable_rho_r` may be invalid.
    - Variable `value_component_rho_r_variable_rho_r` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_C_variable_C` may be invalid.
    - Variable `value_component_C_variable_C` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_h_variable_h` may be invalid.
    - Variable `value_component_h_variable_h` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_tau_h_variable_tau_h` may be invalid.
    - Variable `value_component_tau_h_variable_tau_h` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_h_infinit_variable_h_infinit` may be invalid.
    - Variable `value_component_h_infinit_variable_h_infinit` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_zeta_variable_zeta` may be invalid.
    - Variable `value_component_zeta_variable_zeta` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_m_infinit_variable_m_infinit` may be invalid.
    - Variable `value_component_m_infinit_variable_m_infinit` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_beta_variable_beta` may be invalid.
    - Variable `value_component_beta_variable_beta` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_gamma_variable_gamma` may be invalid.
    - Variable `value_component_gamma_variable_gamma` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_C_ER_variable_C_ER` may be invalid.
    - Variable `value_component_C_ER_variable_C_ER` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_RS_E_variable_RS_E` may be invalid.
    - Variable `value_component_RS_E_variable_RS_E` may be invalid.
      - XPath could not be validated.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe COMBINE/OMEX archive may be invalid.
  - The SED-ML file at location `simulation_0.sedml` may be invalid.
    - Model `model` may be invalid.
      - The changes of the model may be invalid.
        - Change 1 may be invalid.
          - XPath could not be validated.
        - Change 2 may be invalid.
          - XPath could not be validated.
        - Change 3 may be invalid.
          - XPath could not be validated.
        - Change 4 may be invalid.
          - XPath could not be validated.
        - Change 5 may be invalid.
          - XPath could not be validated.
        - Change 6 may be invalid.
          - XPath could not be validated.
        - Change 7 may be invalid.
          - XPath could not be validated.
        - Change 8 may be invalid.
          - XPath could not be validated.
        - Change 9 may be invalid.
          - XPath could not be validated.
        - Change 10 may be invalid.
          - XPath could not be validated.
        - Change 11 may be invalid.
          - XPath could not be validated.
        - Change 12 may be invalid.
          - XPath could not be validated.
        - Change 13 may be invalid.
          - XPath could not be validated.
        - Change 14 may be invalid.
          - XPath could not be validated.
        - Change 15 may be invalid.
          - XPath could not be validated.
        - Change 16 may be invalid.
          - XPath could not be validated.
        - Change 17 may be invalid.
          - XPath could not be validated.
        - Change 18 may be invalid.
          - XPath could not be validated.
        - Change 19 may be invalid.
          - XPath could not be validated.
        - Change 20 may be invalid.
          - XPath could not be validated.
        - Change 21 may be invalid.
          - XPath could not be validated.
        - Change 22 may be invalid.
          - XPath could not be validated.
        - Change 23 may be invalid.
          - XPath could not be validated.
        - Change 24 may be invalid.
          - XPath could not be validated.
        - Change 25 may be invalid.
          - XPath could not be validated.
        - Change 26 may be invalid.
          - XPath could not be validated.
        - Change 27 may be invalid.
          - XPath could not be validated.
        - Change 28 may be invalid.
          - XPath could not be validated.
        - Change 29 may be invalid.
          - XPath could not be validated.
        - Change 30 may be invalid.
          - XPath could not be validated.
        - Change 31 may be invalid.
          - XPath could not be validated.
        - Change 32 may be invalid.
          - XPath could not be validated.
        - Change 33 may be invalid.
          - XPath could not be validated.
        - Change 34 may be invalid.
          - XPath could not be validated.
        - Change 35 may be invalid.
          - XPath could not be validated.
        - Change 36 may be invalid.
          - XPath could not be validated.
        - Change 37 may be invalid.
          - XPath could not be validated.
        - Change 38 may be invalid.
          - XPath could not be validated.
        - Change 39 may be invalid.
          - XPath could not be validated.
        - Change 40 may be invalid.
          - XPath could not be validated.
        - Change 41 may be invalid.
          - XPath could not be validated.
        - Change 42 may be invalid.
          - XPath could not be validated.
        - Change 43 may be invalid.
          - XPath could not be validated.
    - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
      - Variable `value_component_environment_variable_time` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_R_T` may be invalid.
      - Variable `value_component_Parameters_variable_R_T` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_K_1` may be invalid.
      - Variable `value_component_Parameters_variable_K_1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_K_2` may be invalid.
      - Variable `value_component_Parameters_variable_K_2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_k_r` may be invalid.
      - Variable `value_component_Parameters_variable_k_r` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_k_p` may be invalid.
      - Variable `value_component_Parameters_variable_k_p` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_k_e` may be invalid.
      - Variable `value_component_Parameters_variable_k_e` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_xi` may be invalid.
      - Variable `value_component_Parameters_variable_xi` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_G_T` may be invalid.
      - Variable `value_component_Parameters_variable_G_T` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_k_deg` may be invalid.
      - Variable `value_component_Parameters_variable_k_deg` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_k_a` may be invalid.
      - Variable `value_component_Parameters_variable_k_a` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_k_d` may be invalid.
      - Variable `value_component_Parameters_variable_k_d` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_PIP_2_T` may be invalid.
      - Variable `value_component_Parameters_variable_PIP_2_T` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_r_r` may be invalid.
      - Variable `value_component_Parameters_variable_r_r` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_delta` may be invalid.
      - Variable `value_component_Parameters_variable_delta` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_K_c` may be invalid.
      - Variable `value_component_Parameters_variable_K_c` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_alpha` may be invalid.
      - Variable `value_component_Parameters_variable_alpha` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_N_a` may be invalid.
      - Variable `value_component_Parameters_variable_N_a` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_v` may be invalid.
      - Variable `value_component_Parameters_variable_v` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_epsilon_r` may be invalid.
      - Variable `value_component_Parameters_variable_epsilon_r` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_d_1` may be invalid.
      - Variable `value_component_Parameters_variable_d_1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_d_2` may be invalid.
      - Variable `value_component_Parameters_variable_d_2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_d_3` may be invalid.
      - Variable `value_component_Parameters_variable_d_3` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_d_5` may be invalid.
      - Variable `value_component_Parameters_variable_d_5` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_a_2` may be invalid.
      - Variable `value_component_Parameters_variable_a_2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_B_e` may be invalid.
      - Variable `value_component_Parameters_variable_B_e` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_K_e` may be invalid.
      - Variable `value_component_Parameters_variable_K_e` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_B_ER` may be invalid.
      - Variable `value_component_Parameters_variable_B_ER` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_K_ER` may be invalid.
      - Variable `value_component_Parameters_variable_K_ER` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_B_x` may be invalid.
      - Variable `value_component_Parameters_variable_B_x` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_K_x` may be invalid.
      - Variable `value_component_Parameters_variable_K_x` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_k_3` may be invalid.
      - Variable `value_component_Parameters_variable_k_3` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_eta_1` may be invalid.
      - Variable `value_component_Parameters_variable_eta_1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_eta_2` may be invalid.
      - Variable `value_component_Parameters_variable_eta_2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_eta_3` may be invalid.
      - Variable `value_component_Parameters_variable_eta_3` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_Parameters_variable_C_T` may be invalid.
      - Variable `value_component_Parameters_variable_C_T` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_ligand_variable_L` may be invalid.
      - Variable `value_component_ligand_variable_L` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_RS_variable_RS` may be invalid.
      - Variable `value_component_RS_variable_RS` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_RS_p_variable_RS_p` may be invalid.
      - Variable `value_component_RS_p_variable_RS_p` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_G_GTP_variable_G` may be invalid.
      - Variable `value_component_G_GTP_variable_G` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_IP_3_variable_IP_3` may be invalid.
      - Variable `value_component_IP_3_variable_IP_3` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_PIP_2_variable_PIP_2` may be invalid.
      - Variable `value_component_PIP_2_variable_PIP_2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_r_h_variable_r_h` may be invalid.
      - Variable `value_component_r_h_variable_r_h` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rho_r_variable_rho_r` may be invalid.
      - Variable `value_component_rho_r_variable_rho_r` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_C_variable_C` may be invalid.
      - Variable `value_component_C_variable_C` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_h_variable_h` may be invalid.
      - Variable `value_component_h_variable_h` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_tau_h_variable_tau_h` may be invalid.
      - Variable `value_component_tau_h_variable_tau_h` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_h_infinit_variable_h_infinit` may be invalid.
      - Variable `value_component_h_infinit_variable_h_infinit` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_zeta_variable_zeta` may be invalid.
      - Variable `value_component_zeta_variable_zeta` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_m_infinit_variable_m_infinit` may be invalid.
      - Variable `value_component_m_infinit_variable_m_infinit` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_beta_variable_beta` may be invalid.
      - Variable `value_component_beta_variable_beta` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_gamma_variable_gamma` may be invalid.
      - Variable `value_component_gamma_variable_gamma` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_C_ER_variable_C_ER` may be invalid.
      - Variable `value_component_C_ER_variable_C_ER` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_RS_E_variable_RS_E` may be invalid.
      - Variable `value_component_RS_E_variable_RS_E` may be invalid.
        - XPath could not be validated.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
Archive contains 1 SED-ML documents with 1 models, 1 simulations, 1 tasks, 1 reports, and 0 plots:
  simulation_0.sedml:
    Tasks (1):
      task
    Reports (1):
      report: 54 data sets

Executing SED-ML file 1: simulation_0.sedml ...

Bundling outputs ...
Cleaning up ...

============= SUMMARY =============
Executed 1 SED documents:
  SED documents (1):
    Succeeded: 1
    Skipped: 0
    Failed: 0
  Tasks (1):
    Succeeded: 1
    Skipped: 0
    Failed: 0
  Outputs (1):
    Succeeded: 1
    Skipped: 0
    Failed: 0


[0;36m===================================================== Saving log ====================================================[0m
Completed 31.4 KiB/31.4 KiB (305.3 KiB/s) with 1 file(s) remaining
upload: ./rawLog.txt to s3://files.biosimulations.org/simulations/6261761190c6a19595578e5f/rawLog.txt
Completed 43.5 KiB/43.5 KiB (416.5 KiB/s) with 1 file(s) remaining
upload: outputs/log.yml to s3://files.biosimulations.org/simulations/6261761190c6a19595578e5f/outputs/log.yml

[0;36m================================================== Zipping outputs ==================================================[0m
  adding: outputs/ (stored 0%)
