[0;36mThank you for using runBioSimulations![0m

[0;36m================================================ Loading Singularity ================================================[0m

[0;36m=================================================== Set up storage ==================================================[0m

[0;36m========================================== Downloading COMBINE/OMEX archive =========================================[0m
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100   139  100   139    0     0    452      0 --:--:-- --:--:-- --:--:--   454

100 1052k  100 1052k    0     0  2277k      0 --:--:-- --:--:-- --:--:-- 2277k

[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================[0m
INFO:    Using cached SIF image
Traceback (most recent call last):
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 247, in <module>
    if not update_paths(args.path, args.scripts_dir, args.clear_args, args.extra_args):
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 213, in update_paths
    update_scripts(scripts_dir, new_path, clear_args, extra_args)
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 125, in update_scripts
    update_script(os.path.join(bin_dir, fn), new_path, clear_args, extra_args)
  File "/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py", line 118, in update_script
    with open(script_filename, 'w') as f:
OSError: [Errno 30] Read-only file system: '/home/opencor/OpenCOR/bin/../python/bin/biosimulators-utils'
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mCOMBINE/OMEX archive may be invalid.
  - The manifest does not include its parent COMBINE/OMEX archive. Manifests should include their parent COMBINE/OMEX archives.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe SED document is potentially incorrect.
  - Model `model` may be invalid.
    - The changes of the model may be invalid.
      - Change 1 may be invalid.
        - XPath could not be validated.
      - Change 2 may be invalid.
        - XPath could not be validated.
      - Change 3 may be invalid.
        - XPath could not be validated.
      - Change 4 may be invalid.
        - XPath could not be validated.
      - Change 5 may be invalid.
        - XPath could not be validated.
      - Change 6 may be invalid.
        - XPath could not be validated.
      - Change 7 may be invalid.
        - XPath could not be validated.
      - Change 8 may be invalid.
        - XPath could not be validated.
      - Change 9 may be invalid.
        - XPath could not be validated.
      - Change 10 may be invalid.
        - XPath could not be validated.
      - Change 11 may be invalid.
        - XPath could not be validated.
      - Change 12 may be invalid.
        - XPath could not be validated.
      - Change 13 may be invalid.
        - XPath could not be validated.
      - Change 14 may be invalid.
        - XPath could not be validated.
      - Change 15 may be invalid.
        - XPath could not be validated.
      - Change 16 may be invalid.
        - XPath could not be validated.
      - Change 17 may be invalid.
        - XPath could not be validated.
      - Change 18 may be invalid.
        - XPath could not be validated.
      - Change 19 may be invalid.
        - XPath could not be validated.
      - Change 20 may be invalid.
        - XPath could not be validated.
      - Change 21 may be invalid.
        - XPath could not be validated.
      - Change 22 may be invalid.
        - XPath could not be validated.
      - Change 23 may be invalid.
        - XPath could not be validated.
      - Change 24 may be invalid.
        - XPath could not be validated.
      - Change 25 may be invalid.
        - XPath could not be validated.
      - Change 26 may be invalid.
        - XPath could not be validated.
      - Change 27 may be invalid.
        - XPath could not be validated.
      - Change 28 may be invalid.
        - XPath could not be validated.
      - Change 29 may be invalid.
        - XPath could not be validated.
      - Change 30 may be invalid.
        - XPath could not be validated.
      - Change 31 may be invalid.
        - XPath could not be validated.
      - Change 32 may be invalid.
        - XPath could not be validated.
      - Change 33 may be invalid.
        - XPath could not be validated.
      - Change 34 may be invalid.
        - XPath could not be validated.
      - Change 35 may be invalid.
        - XPath could not be validated.
      - Change 36 may be invalid.
        - XPath could not be validated.
      - Change 37 may be invalid.
        - XPath could not be validated.
      - Change 38 may be invalid.
        - XPath could not be validated.
      - Change 39 may be invalid.
        - XPath could not be validated.
  - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
    - Variable `value_component_environment_variable_time` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_12` may be invalid.
    - Variable `value_component_parameters_variable_k0_12` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_21` may be invalid.
    - Variable `value_component_parameters_variable_k0_21` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_23` may be invalid.
    - Variable `value_component_parameters_variable_k0_23` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_32` may be invalid.
    - Variable `value_component_parameters_variable_k0_32` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_34` may be invalid.
    - Variable `value_component_parameters_variable_k0_34` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_43` may be invalid.
    - Variable `value_component_parameters_variable_k0_43` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_45` may be invalid.
    - Variable `value_component_parameters_variable_k0_45` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_54` may be invalid.
    - Variable `value_component_parameters_variable_k0_54` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_25` may be invalid.
    - Variable `value_component_parameters_variable_k0_25` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_52` may be invalid.
    - Variable `value_component_parameters_variable_k0_52` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_56` may be invalid.
    - Variable `value_component_parameters_variable_k0_56` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_65_f` may be invalid.
    - Variable `value_component_parameters_variable_k0_65_f` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_61_f` may be invalid.
    - Variable `value_component_parameters_variable_k0_61_f` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_16_f` may be invalid.
    - Variable `value_component_parameters_variable_k0_16_f` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_65_r` may be invalid.
    - Variable `value_component_parameters_variable_k0_65_r` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_61_r` may be invalid.
    - Variable `value_component_parameters_variable_k0_61_r` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_16_r` may be invalid.
    - Variable `value_component_parameters_variable_k0_16_r` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_65` may be invalid.
    - Variable `value_component_parameters_variable_k0_65` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_61` may be invalid.
    - Variable `value_component_parameters_variable_k0_61` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_k0_16` may be invalid.
    - Variable `value_component_parameters_variable_k0_16` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_delta` may be invalid.
    - Variable `value_component_parameters_variable_delta` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_alpha_p` may be invalid.
    - Variable `value_component_parameters_variable_alpha_p` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_alpha_pp` may be invalid.
    - Variable `value_component_parameters_variable_alpha_pp` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_N_C` may be invalid.
    - Variable `value_component_parameters_variable_N_C` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_N_Avo` may be invalid.
    - Variable `value_component_parameters_variable_N_Avo` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_area` may be invalid.
    - Variable `value_component_parameters_variable_area` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_C_T` may be invalid.
    - Variable `value_component_parameters_variable_C_T` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_n` may be invalid.
    - Variable `value_component_parameters_variable_n` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_z_c` may be invalid.
    - Variable `value_component_parameters_variable_z_c` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_z_Na` may be invalid.
    - Variable `value_component_parameters_variable_z_Na` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_F` may be invalid.
    - Variable `value_component_parameters_variable_F` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_R` may be invalid.
    - Variable `value_component_parameters_variable_R` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_T` may be invalid.
    - Variable `value_component_parameters_variable_T` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_parameters_variable_mu` may be invalid.
    - Variable `value_component_parameters_variable_mu` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_ion_concentrations_variable_V` may be invalid.
    - Variable `value_component_ion_concentrations_variable_V` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_ion_concentrations_variable_Na_i` may be invalid.
    - Variable `value_component_ion_concentrations_variable_Na_i` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_ion_concentrations_variable_Na_o` may be invalid.
    - Variable `value_component_ion_concentrations_variable_Na_o` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_ion_concentrations_variable_glucose_i` may be invalid.
    - Variable `value_component_ion_concentrations_variable_glucose_i` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_ion_concentrations_variable_glucose_o` may be invalid.
    - Variable `value_component_ion_concentrations_variable_glucose_o` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rate_constants_variable_k_12` may be invalid.
    - Variable `value_component_rate_constants_variable_k_12` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rate_constants_variable_k_21` may be invalid.
    - Variable `value_component_rate_constants_variable_k_21` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rate_constants_variable_k_23` may be invalid.
    - Variable `value_component_rate_constants_variable_k_23` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rate_constants_variable_k_32` may be invalid.
    - Variable `value_component_rate_constants_variable_k_32` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rate_constants_variable_k_34` may be invalid.
    - Variable `value_component_rate_constants_variable_k_34` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rate_constants_variable_k_43` may be invalid.
    - Variable `value_component_rate_constants_variable_k_43` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rate_constants_variable_k_45` may be invalid.
    - Variable `value_component_rate_constants_variable_k_45` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rate_constants_variable_k_54` may be invalid.
    - Variable `value_component_rate_constants_variable_k_54` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rate_constants_variable_k_25` may be invalid.
    - Variable `value_component_rate_constants_variable_k_25` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rate_constants_variable_k_52` may be invalid.
    - Variable `value_component_rate_constants_variable_k_52` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rate_constants_variable_k_56` may be invalid.
    - Variable `value_component_rate_constants_variable_k_56` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rate_constants_variable_k_65` may be invalid.
    - Variable `value_component_rate_constants_variable_k_65` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rate_constants_variable_k_61` may be invalid.
    - Variable `value_component_rate_constants_variable_k_61` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rate_constants_variable_k_16` may be invalid.
    - Variable `value_component_rate_constants_variable_k_16` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rate_constants_variable_ks_12` may be invalid.
    - Variable `value_component_rate_constants_variable_ks_12` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rate_constants_variable_k0_54_temp` may be invalid.
    - Variable `value_component_rate_constants_variable_k0_54_temp` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_rate_constants_variable_k_52_temp` may be invalid.
    - Variable `value_component_rate_constants_variable_k_52_temp` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_kinetic_equations_variable_C_1` may be invalid.
    - Variable `value_component_kinetic_equations_variable_C_1` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_kinetic_equations_variable_C_2` may be invalid.
    - Variable `value_component_kinetic_equations_variable_C_2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_kinetic_equations_variable_C_3` may be invalid.
    - Variable `value_component_kinetic_equations_variable_C_3` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_kinetic_equations_variable_C_4` may be invalid.
    - Variable `value_component_kinetic_equations_variable_C_4` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_kinetic_equations_variable_C_5` may be invalid.
    - Variable `value_component_kinetic_equations_variable_C_5` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_kinetic_equations_variable_C_6` may be invalid.
    - Variable `value_component_kinetic_equations_variable_C_6` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_kinetic_equations_variable_C_6_temp` may be invalid.
    - Variable `value_component_kinetic_equations_variable_C_6_temp` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_king_altman_states_variable_C1_sum` may be invalid.
    - Variable `value_component_king_altman_states_variable_C1_sum` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_king_altman_states_variable_C2_sum` may be invalid.
    - Variable `value_component_king_altman_states_variable_C2_sum` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_king_altman_states_variable_C3_sum` may be invalid.
    - Variable `value_component_king_altman_states_variable_C3_sum` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_king_altman_states_variable_C4_sum` may be invalid.
    - Variable `value_component_king_altman_states_variable_C4_sum` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_king_altman_states_variable_C5_sum` may be invalid.
    - Variable `value_component_king_altman_states_variable_C5_sum` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_king_altman_states_variable_C6_sum` may be invalid.
    - Variable `value_component_king_altman_states_variable_C6_sum` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_king_altman_states_variable_C_sum` may be invalid.
    - Variable `value_component_king_altman_states_variable_C_sum` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_king_altman_states_variable_C1` may be invalid.
    - Variable `value_component_king_altman_states_variable_C1` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_king_altman_states_variable_C2` may be invalid.
    - Variable `value_component_king_altman_states_variable_C2` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_king_altman_states_variable_C3` may be invalid.
    - Variable `value_component_king_altman_states_variable_C3` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_king_altman_states_variable_C4` may be invalid.
    - Variable `value_component_king_altman_states_variable_C4` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_king_altman_states_variable_C5` may be invalid.
    - Variable `value_component_king_altman_states_variable_C5` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_king_altman_states_variable_C6` may be invalid.
    - Variable `value_component_king_altman_states_variable_C6` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_NBC_current_variable_I_NaGl_pSS` may be invalid.
    - Variable `value_component_NBC_current_variable_I_NaGl_pSS` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_NBC_current_variable_I_NaGl_SS` may be invalid.
    - Variable `value_component_NBC_current_variable_I_NaGl_SS` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_phenomonological_constants_variable_epsilon` may be invalid.
    - Variable `value_component_phenomonological_constants_variable_epsilon` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_phenomonological_constants_variable_lambda` may be invalid.
    - Variable `value_component_phenomonological_constants_variable_lambda` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_phenomonological_constants_variable_chi` may be invalid.
    - Variable `value_component_phenomonological_constants_variable_chi` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_phenomonological_constants_variable_alpha` may be invalid.
    - Variable `value_component_phenomonological_constants_variable_alpha` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_phenomonological_constants_variable_beta` may be invalid.
    - Variable `value_component_phenomonological_constants_variable_beta` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_phenomonological_constants_variable_gamma` may be invalid.
    - Variable `value_component_phenomonological_constants_variable_gamma` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_phenomonological_constants_variable_phi` may be invalid.
    - Variable `value_component_phenomonological_constants_variable_phi` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_phenomonological_constants_variable_Imax_Na` may be invalid.
    - Variable `value_component_phenomonological_constants_variable_Imax_Na` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_phenomonological_constants_variable_Imax_gluc` may be invalid.
    - Variable `value_component_phenomonological_constants_variable_Imax_gluc` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_phenomonological_constants_variable_Khalf_Na_sq` may be invalid.
    - Variable `value_component_phenomonological_constants_variable_Khalf_Na_sq` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_phenomonological_constants_variable_Khalf_Na` may be invalid.
    - Variable `value_component_phenomonological_constants_variable_Khalf_Na` may be invalid.
      - XPath could not be validated.
  - Data generator `data_generator_value_component_phenomonological_constants_variable_Khalf_gluc` may be invalid.
    - Variable `value_component_phenomonological_constants_variable_Khalf_gluc` may be invalid.
      - XPath could not be validated.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe COMBINE/OMEX archive may be invalid.
  - The SED-ML file at location `simulation_0.sedml` may be invalid.
    - Model `model` may be invalid.
      - The changes of the model may be invalid.
        - Change 1 may be invalid.
          - XPath could not be validated.
        - Change 2 may be invalid.
          - XPath could not be validated.
        - Change 3 may be invalid.
          - XPath could not be validated.
        - Change 4 may be invalid.
          - XPath could not be validated.
        - Change 5 may be invalid.
          - XPath could not be validated.
        - Change 6 may be invalid.
          - XPath could not be validated.
        - Change 7 may be invalid.
          - XPath could not be validated.
        - Change 8 may be invalid.
          - XPath could not be validated.
        - Change 9 may be invalid.
          - XPath could not be validated.
        - Change 10 may be invalid.
          - XPath could not be validated.
        - Change 11 may be invalid.
          - XPath could not be validated.
        - Change 12 may be invalid.
          - XPath could not be validated.
        - Change 13 may be invalid.
          - XPath could not be validated.
        - Change 14 may be invalid.
          - XPath could not be validated.
        - Change 15 may be invalid.
          - XPath could not be validated.
        - Change 16 may be invalid.
          - XPath could not be validated.
        - Change 17 may be invalid.
          - XPath could not be validated.
        - Change 18 may be invalid.
          - XPath could not be validated.
        - Change 19 may be invalid.
          - XPath could not be validated.
        - Change 20 may be invalid.
          - XPath could not be validated.
        - Change 21 may be invalid.
          - XPath could not be validated.
        - Change 22 may be invalid.
          - XPath could not be validated.
        - Change 23 may be invalid.
          - XPath could not be validated.
        - Change 24 may be invalid.
          - XPath could not be validated.
        - Change 25 may be invalid.
          - XPath could not be validated.
        - Change 26 may be invalid.
          - XPath could not be validated.
        - Change 27 may be invalid.
          - XPath could not be validated.
        - Change 28 may be invalid.
          - XPath could not be validated.
        - Change 29 may be invalid.
          - XPath could not be validated.
        - Change 30 may be invalid.
          - XPath could not be validated.
        - Change 31 may be invalid.
          - XPath could not be validated.
        - Change 32 may be invalid.
          - XPath could not be validated.
        - Change 33 may be invalid.
          - XPath could not be validated.
        - Change 34 may be invalid.
          - XPath could not be validated.
        - Change 35 may be invalid.
          - XPath could not be validated.
        - Change 36 may be invalid.
          - XPath could not be validated.
        - Change 37 may be invalid.
          - XPath could not be validated.
        - Change 38 may be invalid.
          - XPath could not be validated.
        - Change 39 may be invalid.
          - XPath could not be validated.
    - Data generator `data_generator_value_component_environment_variable_time` may be invalid.
      - Variable `value_component_environment_variable_time` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_12` may be invalid.
      - Variable `value_component_parameters_variable_k0_12` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_21` may be invalid.
      - Variable `value_component_parameters_variable_k0_21` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_23` may be invalid.
      - Variable `value_component_parameters_variable_k0_23` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_32` may be invalid.
      - Variable `value_component_parameters_variable_k0_32` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_34` may be invalid.
      - Variable `value_component_parameters_variable_k0_34` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_43` may be invalid.
      - Variable `value_component_parameters_variable_k0_43` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_45` may be invalid.
      - Variable `value_component_parameters_variable_k0_45` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_54` may be invalid.
      - Variable `value_component_parameters_variable_k0_54` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_25` may be invalid.
      - Variable `value_component_parameters_variable_k0_25` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_52` may be invalid.
      - Variable `value_component_parameters_variable_k0_52` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_56` may be invalid.
      - Variable `value_component_parameters_variable_k0_56` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_65_f` may be invalid.
      - Variable `value_component_parameters_variable_k0_65_f` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_61_f` may be invalid.
      - Variable `value_component_parameters_variable_k0_61_f` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_16_f` may be invalid.
      - Variable `value_component_parameters_variable_k0_16_f` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_65_r` may be invalid.
      - Variable `value_component_parameters_variable_k0_65_r` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_61_r` may be invalid.
      - Variable `value_component_parameters_variable_k0_61_r` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_16_r` may be invalid.
      - Variable `value_component_parameters_variable_k0_16_r` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_65` may be invalid.
      - Variable `value_component_parameters_variable_k0_65` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_61` may be invalid.
      - Variable `value_component_parameters_variable_k0_61` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_k0_16` may be invalid.
      - Variable `value_component_parameters_variable_k0_16` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_delta` may be invalid.
      - Variable `value_component_parameters_variable_delta` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_alpha_p` may be invalid.
      - Variable `value_component_parameters_variable_alpha_p` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_alpha_pp` may be invalid.
      - Variable `value_component_parameters_variable_alpha_pp` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_N_C` may be invalid.
      - Variable `value_component_parameters_variable_N_C` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_N_Avo` may be invalid.
      - Variable `value_component_parameters_variable_N_Avo` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_area` may be invalid.
      - Variable `value_component_parameters_variable_area` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_C_T` may be invalid.
      - Variable `value_component_parameters_variable_C_T` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_n` may be invalid.
      - Variable `value_component_parameters_variable_n` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_z_c` may be invalid.
      - Variable `value_component_parameters_variable_z_c` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_z_Na` may be invalid.
      - Variable `value_component_parameters_variable_z_Na` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_F` may be invalid.
      - Variable `value_component_parameters_variable_F` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_R` may be invalid.
      - Variable `value_component_parameters_variable_R` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_T` may be invalid.
      - Variable `value_component_parameters_variable_T` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_parameters_variable_mu` may be invalid.
      - Variable `value_component_parameters_variable_mu` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_ion_concentrations_variable_V` may be invalid.
      - Variable `value_component_ion_concentrations_variable_V` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_ion_concentrations_variable_Na_i` may be invalid.
      - Variable `value_component_ion_concentrations_variable_Na_i` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_ion_concentrations_variable_Na_o` may be invalid.
      - Variable `value_component_ion_concentrations_variable_Na_o` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_ion_concentrations_variable_glucose_i` may be invalid.
      - Variable `value_component_ion_concentrations_variable_glucose_i` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_ion_concentrations_variable_glucose_o` may be invalid.
      - Variable `value_component_ion_concentrations_variable_glucose_o` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rate_constants_variable_k_12` may be invalid.
      - Variable `value_component_rate_constants_variable_k_12` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rate_constants_variable_k_21` may be invalid.
      - Variable `value_component_rate_constants_variable_k_21` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rate_constants_variable_k_23` may be invalid.
      - Variable `value_component_rate_constants_variable_k_23` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rate_constants_variable_k_32` may be invalid.
      - Variable `value_component_rate_constants_variable_k_32` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rate_constants_variable_k_34` may be invalid.
      - Variable `value_component_rate_constants_variable_k_34` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rate_constants_variable_k_43` may be invalid.
      - Variable `value_component_rate_constants_variable_k_43` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rate_constants_variable_k_45` may be invalid.
      - Variable `value_component_rate_constants_variable_k_45` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rate_constants_variable_k_54` may be invalid.
      - Variable `value_component_rate_constants_variable_k_54` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rate_constants_variable_k_25` may be invalid.
      - Variable `value_component_rate_constants_variable_k_25` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rate_constants_variable_k_52` may be invalid.
      - Variable `value_component_rate_constants_variable_k_52` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rate_constants_variable_k_56` may be invalid.
      - Variable `value_component_rate_constants_variable_k_56` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rate_constants_variable_k_65` may be invalid.
      - Variable `value_component_rate_constants_variable_k_65` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rate_constants_variable_k_61` may be invalid.
      - Variable `value_component_rate_constants_variable_k_61` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rate_constants_variable_k_16` may be invalid.
      - Variable `value_component_rate_constants_variable_k_16` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rate_constants_variable_ks_12` may be invalid.
      - Variable `value_component_rate_constants_variable_ks_12` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rate_constants_variable_k0_54_temp` may be invalid.
      - Variable `value_component_rate_constants_variable_k0_54_temp` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_rate_constants_variable_k_52_temp` may be invalid.
      - Variable `value_component_rate_constants_variable_k_52_temp` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_kinetic_equations_variable_C_1` may be invalid.
      - Variable `value_component_kinetic_equations_variable_C_1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_kinetic_equations_variable_C_2` may be invalid.
      - Variable `value_component_kinetic_equations_variable_C_2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_kinetic_equations_variable_C_3` may be invalid.
      - Variable `value_component_kinetic_equations_variable_C_3` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_kinetic_equations_variable_C_4` may be invalid.
      - Variable `value_component_kinetic_equations_variable_C_4` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_kinetic_equations_variable_C_5` may be invalid.
      - Variable `value_component_kinetic_equations_variable_C_5` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_kinetic_equations_variable_C_6` may be invalid.
      - Variable `value_component_kinetic_equations_variable_C_6` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_kinetic_equations_variable_C_6_temp` may be invalid.
      - Variable `value_component_kinetic_equations_variable_C_6_temp` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_king_altman_states_variable_C1_sum` may be invalid.
      - Variable `value_component_king_altman_states_variable_C1_sum` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_king_altman_states_variable_C2_sum` may be invalid.
      - Variable `value_component_king_altman_states_variable_C2_sum` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_king_altman_states_variable_C3_sum` may be invalid.
      - Variable `value_component_king_altman_states_variable_C3_sum` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_king_altman_states_variable_C4_sum` may be invalid.
      - Variable `value_component_king_altman_states_variable_C4_sum` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_king_altman_states_variable_C5_sum` may be invalid.
      - Variable `value_component_king_altman_states_variable_C5_sum` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_king_altman_states_variable_C6_sum` may be invalid.
      - Variable `value_component_king_altman_states_variable_C6_sum` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_king_altman_states_variable_C_sum` may be invalid.
      - Variable `value_component_king_altman_states_variable_C_sum` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_king_altman_states_variable_C1` may be invalid.
      - Variable `value_component_king_altman_states_variable_C1` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_king_altman_states_variable_C2` may be invalid.
      - Variable `value_component_king_altman_states_variable_C2` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_king_altman_states_variable_C3` may be invalid.
      - Variable `value_component_king_altman_states_variable_C3` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_king_altman_states_variable_C4` may be invalid.
      - Variable `value_component_king_altman_states_variable_C4` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_king_altman_states_variable_C5` may be invalid.
      - Variable `value_component_king_altman_states_variable_C5` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_king_altman_states_variable_C6` may be invalid.
      - Variable `value_component_king_altman_states_variable_C6` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_NBC_current_variable_I_NaGl_pSS` may be invalid.
      - Variable `value_component_NBC_current_variable_I_NaGl_pSS` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_NBC_current_variable_I_NaGl_SS` may be invalid.
      - Variable `value_component_NBC_current_variable_I_NaGl_SS` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_phenomonological_constants_variable_epsilon` may be invalid.
      - Variable `value_component_phenomonological_constants_variable_epsilon` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_phenomonological_constants_variable_lambda` may be invalid.
      - Variable `value_component_phenomonological_constants_variable_lambda` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_phenomonological_constants_variable_chi` may be invalid.
      - Variable `value_component_phenomonological_constants_variable_chi` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_phenomonological_constants_variable_alpha` may be invalid.
      - Variable `value_component_phenomonological_constants_variable_alpha` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_phenomonological_constants_variable_beta` may be invalid.
      - Variable `value_component_phenomonological_constants_variable_beta` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_phenomonological_constants_variable_gamma` may be invalid.
      - Variable `value_component_phenomonological_constants_variable_gamma` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_phenomonological_constants_variable_phi` may be invalid.
      - Variable `value_component_phenomonological_constants_variable_phi` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_phenomonological_constants_variable_Imax_Na` may be invalid.
      - Variable `value_component_phenomonological_constants_variable_Imax_Na` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_phenomonological_constants_variable_Imax_gluc` may be invalid.
      - Variable `value_component_phenomonological_constants_variable_Imax_gluc` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_phenomonological_constants_variable_Khalf_Na_sq` may be invalid.
      - Variable `value_component_phenomonological_constants_variable_Khalf_Na_sq` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_phenomonological_constants_variable_Khalf_Na` may be invalid.
      - Variable `value_component_phenomonological_constants_variable_Khalf_Na` may be invalid.
        - XPath could not be validated.
    - Data generator `data_generator_value_component_phenomonological_constants_variable_Khalf_gluc` may be invalid.
      - Variable `value_component_phenomonological_constants_variable_Khalf_gluc` may be invalid.
        - XPath could not be validated.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
Archive contains 1 SED-ML documents with 1 models, 1 simulations, 1 tasks, 1 reports, and 0 plots:
  simulation_0.sedml:
    Tasks (1):
      task
    Reports (1):
      report: 91 data sets

Executing SED-ML file 1: simulation_0.sedml ...

Bundling outputs ...
Cleaning up ...

============= SUMMARY =============
Executed 1 SED documents:
  SED documents (1):
    Succeeded: 1
    Skipped: 0
    Failed: 0
  Tasks (1):
    Succeeded: 1
    Skipped: 0
    Failed: 0
  Outputs (1):
    Succeeded: 1
    Skipped: 0
    Failed: 0


[0;36m===================================================== Saving log ====================================================[0m
Completed 48.3 KiB/48.3 KiB (559.6 KiB/s) with 1 file(s) remaining
upload: ./rawLog.txt to s3://files.biosimulations.org/simulations/626174d1abe612c540c67ec3/rawLog.txt
Completed 70.0 KiB/70.0 KiB (547.6 KiB/s) with 1 file(s) remaining
upload: outputs/log.yml to s3://files.biosimulations.org/simulations/626174d1abe612c540c67ec3/outputs/log.yml

[0;36m================================================== Zipping outputs ==================================================[0m
  adding: outputs/ (stored 0%)
