[0;36mThank you for using runBioSimulations![0m

[0;36m================================================ Loading Singularity ================================================[0m

[0;36m========================================== Downloading COMBINE/OMEX archive =========================================[0m
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100   139  100   139    0     0    458      0 --:--:-- --:--:-- --:--:--   458

100 74269  100 74269    0     0   175k      0 --:--:-- --:--:-- --:--:--  175k

[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================[0m
INFO:    Using cached SIF image
/usr/local/lib/python3.9/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mCOMBINE/OMEX archive has warnings.
  - The manifest does not include its parent COMBINE/OMEX archive. Manifests should include their parent COMBINE/OMEX archives.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
 [34msucceeded[0m

  Executed 1 tasks and 2 outputs:
    Tasks:
      Succeeded: 1
      Skipped: 0
      Failed: 0
    Outputs:
      Succeeded: 2
      Skipped: 0
      Failed: 0

Bundling outputs ...
Cleaning up ...

============= SUMMARY =============
Executed 1 SED documents:
  SED documents (1):
    Succeeded: 1
    Skipped: 0
    Failed: 0
  Tasks (1):
    Succeeded: 1
    Skipped: 0
    Failed: 0
  Outputs (2):
    Succeeded: 2
    Skipped: 0
    Failed: 0


[0;36m====================================== Saving contents of COMBINE/OMEX archive ======================================[0m
Archive:  archive.omex
  inflating: contents/README.md      
  inflating: contents/README.html    
  inflating: contents/parameters.m   
  inflating: contents/ET.m           
  inflating: contents/xpp/bifurcation.ode  
  inflating: contents/ME-PCM/README.md  
  inflating: contents/ME-PCM/makefile  
  inflating: contents/ME-PCM/uq_parameters.h  
  inflating: contents/ME-PCM/uq_ET.c  
  inflating: contents/ME-PCM/uq_ETCell.h  
  inflating: contents/ME-PCM/abscissa.c  
  inflating: contents/ME-PCM/uq_processTrace.c  
  inflating: contents/ME-PCM/readTrace.c  
  inflating: contents/ME-PCM/sample.c  
  inflating: contents/xpp/bifurcation.sedml  
  inflating: contents/metadata.rdf   
  inflating: contents/screenshot.png  
  inflating: contents/manifest.xml   
Completed 5.5 KiB/168.2 KiB (54.2 KiB/s) with 18 file(s) remaining
upload: contents/ET.m to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/ET.m
Completed 5.5 KiB/168.2 KiB (54.2 KiB/s) with 17 file(s) remaining
Completed 6.8 KiB/168.2 KiB (54.9 KiB/s) with 17 file(s) remaining
upload: contents/ME-PCM/README.md to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/ME-PCM/README.md
Completed 6.8 KiB/168.2 KiB (54.9 KiB/s) with 16 file(s) remaining
Completed 7.0 KiB/168.2 KiB (53.4 KiB/s) with 16 file(s) remaining
upload: contents/ME-PCM/uq_ETCell.h to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/ME-PCM/uq_ETCell.h
Completed 7.0 KiB/168.2 KiB (53.4 KiB/s) with 15 file(s) remaining
Completed 10.7 KiB/168.2 KiB (74.4 KiB/s) with 15 file(s) remaining
upload: contents/ME-PCM/uq_processTrace.c to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/ME-PCM/uq_processTrace.c
Completed 10.7 KiB/168.2 KiB (74.4 KiB/s) with 14 file(s) remaining
Completed 12.3 KiB/168.2 KiB (84.8 KiB/s) with 14 file(s) remaining
upload: contents/ME-PCM/uq_parameters.h to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/ME-PCM/uq_parameters.h
Completed 12.3 KiB/168.2 KiB (84.8 KiB/s) with 13 file(s) remaining
Completed 16.2 KiB/168.2 KiB (101.7 KiB/s) with 13 file(s) remaining
upload: contents/README.html to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/README.html
Completed 16.2 KiB/168.2 KiB (101.7 KiB/s) with 12 file(s) remaining
Completed 17.8 KiB/168.2 KiB (109.9 KiB/s) with 12 file(s) remaining
upload: contents/README.md to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/README.md
Completed 17.8 KiB/168.2 KiB (109.9 KiB/s) with 11 file(s) remaining
Completed 114.8 KiB/168.2 KiB (663.1 KiB/s) with 11 file(s) remaining
upload: contents/ME-PCM/abscissa.c to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/ME-PCM/abscissa.c
Completed 114.8 KiB/168.2 KiB (663.1 KiB/s) with 10 file(s) remaining
Completed 125.7 KiB/168.2 KiB (707.0 KiB/s) with 10 file(s) remaining
upload: contents/screenshot.png to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/screenshot.png
Completed 125.7 KiB/168.2 KiB (707.0 KiB/s) with 9 file(s) remaining
Completed 127.7 KiB/168.2 KiB (711.3 KiB/s) with 9 file(s) remaining
upload: contents/manifest.xml to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/manifest.xml
Completed 127.7 KiB/168.2 KiB (711.3 KiB/s) with 8 file(s) remaining
Completed 131.0 KiB/168.2 KiB (708.5 KiB/s) with 8 file(s) remaining
upload: contents/xpp/bifurcation.ode to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/xpp/bifurcation.ode
Completed 131.0 KiB/168.2 KiB (708.5 KiB/s) with 7 file(s) remaining
Completed 140.9 KiB/168.2 KiB (738.1 KiB/s) with 7 file(s) remaining
upload: contents/metadata.rdf to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/metadata.rdf
Completed 140.9 KiB/168.2 KiB (738.1 KiB/s) with 6 file(s) remaining
Completed 145.6 KiB/168.2 KiB (746.5 KiB/s) with 6 file(s) remaining
upload: contents/ME-PCM/uq_ET.c to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/ME-PCM/uq_ET.c
Completed 145.6 KiB/168.2 KiB (746.5 KiB/s) with 5 file(s) remaining
Completed 153.0 KiB/168.2 KiB (712.5 KiB/s) with 5 file(s) remaining
upload: contents/xpp/bifurcation.sedml to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/xpp/bifurcation.sedml
Completed 153.0 KiB/168.2 KiB (712.5 KiB/s) with 4 file(s) remaining
Completed 154.6 KiB/168.2 KiB (711.7 KiB/s) with 4 file(s) remaining
upload: contents/parameters.m to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/parameters.m
Completed 154.6 KiB/168.2 KiB (711.7 KiB/s) with 3 file(s) remaining
Completed 155.2 KiB/168.2 KiB (703.2 KiB/s) with 3 file(s) remaining
upload: contents/ME-PCM/readTrace.c to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/ME-PCM/readTrace.c
Completed 155.2 KiB/168.2 KiB (703.2 KiB/s) with 2 file(s) remaining
Completed 167.8 KiB/168.2 KiB (750.5 KiB/s) with 2 file(s) remaining
upload: contents/ME-PCM/sample.c to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/ME-PCM/sample.c
Completed 167.8 KiB/168.2 KiB (750.5 KiB/s) with 1 file(s) remaining
Completed 168.2 KiB/168.2 KiB (668.2 KiB/s) with 1 file(s) remaining
upload: contents/ME-PCM/makefile to s3://files.biosimulations.org/simulations/621d42beb50991044c79ae43/contents/ME-PCM/makefile

[0;36m=================================================== Saving results ==================================================[0m
creating group /xpp
creating group /xpp/bifurcation.sedml
creating dataset /xpp/bifurcation.sedml/plot, shape: (2, 1001), type: float64
dataset created, uuid: d-cdc038fc-3bc63a26-c587-ce92e8-7449b0, chunk_size: (2, 1001)
creating dataset /xpp/bifurcation.sedml/report, shape: (8, 1001), type: float64
dataset created, uuid: d-cdc038fc-3bc63a26-2255-0bf316-107d67, chunk_size: (8, 1001)
creating attribute combineArchiveLocation in /xpp
creating attribute uri in /xpp
creating attribute combineArchiveLocation in /xpp/bifurcation.sedml
creating attribute uri in /xpp/bifurcation.sedml
creating attribute _type in /xpp/bifurcation.sedml/plot
creating attribute sedmlDataSetDataTypes in /xpp/bifurcation.sedml/plot
creating attribute sedmlDataSetIds in /xpp/bifurcation.sedml/plot
creating attribute sedmlDataSetLabels in /xpp/bifurcation.sedml/plot
creating attribute sedmlDataSetNames in /xpp/bifurcation.sedml/plot
creating attribute sedmlDataSetShapes in /xpp/bifurcation.sedml/plot
creating attribute sedmlId in /xpp/bifurcation.sedml/plot
creating attribute uri in /xpp/bifurcation.sedml/plot
creating attribute _type in /xpp/bifurcation.sedml/report
creating attribute sedmlDataSetDataTypes in /xpp/bifurcation.sedml/report
creating attribute sedmlDataSetIds in /xpp/bifurcation.sedml/report
creating attribute sedmlDataSetLabels in /xpp/bifurcation.sedml/report
creating attribute sedmlDataSetNames in /xpp/bifurcation.sedml/report
creating attribute sedmlDataSetShapes in /xpp/bifurcation.sedml/report
creating attribute sedmlId in /xpp/bifurcation.sedml/report
creating attribute sedmlName in /xpp/bifurcation.sedml/report
creating attribute uri in /xpp/bifurcation.sedml/report
create_links: /
got link: xpp
create_links: /xpp
got link: bifurcation.sedml
create_links: /xpp/bifurcation.sedml
got link: plot
got link: report
write_dataset src: /xpp/bifurcation.sedml/plot to tgt: /xpp/bifurcation.sedml/plot, shape: (2, 1001), type: float64
iterating over chunks for /xpp/bifurcation.sedml/plot
writing dataset data for slice: (slice(0, 2, 1), slice(0, 1001, 1))
done with dataload for /xpp/bifurcation.sedml/plot
write_dataset src: /xpp/bifurcation.sedml/report to tgt: /xpp/bifurcation.sedml/report, shape: (8, 1001), type: float64
iterating over chunks for /xpp/bifurcation.sedml/report
writing dataset data for slice: (slice(0, 8, 1), slice(0, 1001, 1))
done with dataload for /xpp/bifurcation.sedml/report
load_file complete
File outputs/reports.h5 uploaded to domain: /results/621d42beb50991044c79ae43

[0;36m================================================== Zipping outputs ==================================================[0m
  adding: outputs/ (stored 0%)
