[0;36mThank you for using runBioSimulations![0m

[0;36m================================================ Loading Singularity ================================================[0m

[0;36m========================================== Downloading COMBINE/OMEX archive =========================================[0m
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[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================[0m
INFO:    Using cached SIF image
/usr/local/lib/python3.9/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mCOMBINE/OMEX archive has warnings.
  - The manifest does not include its parent COMBINE/OMEX archive. Manifests should include their parent COMBINE/OMEX archives.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
 [34msucceeded[0m

  Executed 1 tasks and 2 outputs:
    Tasks:
      Succeeded: 1
      Skipped: 0
      Failed: 0
    Outputs:
      Succeeded: 2
      Skipped: 0
      Failed: 0

Bundling outputs ...
Cleaning up ...

============= SUMMARY =============
Executed 4 SED documents:
  SED documents (4):
    Succeeded: 4
    Skipped: 0
    Failed: 0
  Tasks (4):
    Succeeded: 4
    Skipped: 0
    Failed: 0
  Outputs (8):
    Succeeded: 8
    Skipped: 0
    Failed: 0


[0;36m====================================== Saving contents of COMBINE/OMEX archive ======================================[0m
Archive:  archive.omex
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[0;36m=================================================== Saving results ==================================================[0m
creating group /fig3a.sedml
creating dataset /fig3a.sedml/plot, shape: (3, 1001), type: float64
dataset created, uuid: d-7d9aa966-e92baeb0-52f5-3e7333-891198, chunk_size: (3, 1001)
creating dataset /fig3a.sedml/report, shape: (5, 1001), type: float64
dataset created, uuid: d-7d9aa966-e92baeb0-93fe-6b0a81-88ff1f, chunk_size: (5, 1001)
creating group /fig3b.sedml
creating dataset /fig3b.sedml/plot, shape: (3, 1001), type: float64
dataset created, uuid: d-7d9aa966-e92baeb0-2320-d0dca0-904fa9, chunk_size: (3, 1001)
creating dataset /fig3b.sedml/report, shape: (13, 1001), type: float64
dataset created, uuid: d-7d9aa966-e92baeb0-8214-4e7148-96b8a2, chunk_size: (13, 1001)
creating group /fig3c.sedml
creating dataset /fig3c.sedml/plot, shape: (3, 1001), type: float64
dataset created, uuid: d-7d9aa966-e92baeb0-d767-4f3dfe-f2232f, chunk_size: (3, 1001)
creating dataset /fig3c.sedml/report, shape: (13, 1001), type: float64
dataset created, uuid: d-7d9aa966-e92baeb0-5b58-601591-9045b1, chunk_size: (13, 1001)
creating group /fig3d.sedml
creating dataset /fig3d.sedml/plot, shape: (3, 1001), type: float64
dataset created, uuid: d-7d9aa966-e92baeb0-2a85-703830-b87552, chunk_size: (3, 1001)
creating dataset /fig3d.sedml/report, shape: (13, 1001), type: float64
dataset created, uuid: d-7d9aa966-e92baeb0-a334-7f14f2-664725, chunk_size: (13, 1001)
creating attribute combineArchiveLocation in /fig3a.sedml
creating attribute uri in /fig3a.sedml
creating attribute _type in /fig3a.sedml/plot
creating attribute sedmlDataSetDataTypes in /fig3a.sedml/plot
creating attribute sedmlDataSetIds in /fig3a.sedml/plot
creating attribute sedmlDataSetLabels in /fig3a.sedml/plot
creating attribute sedmlDataSetNames in /fig3a.sedml/plot
creating attribute sedmlDataSetShapes in /fig3a.sedml/plot
creating attribute sedmlId in /fig3a.sedml/plot
creating attribute uri in /fig3a.sedml/plot
creating attribute _type in /fig3a.sedml/report
creating attribute sedmlDataSetDataTypes in /fig3a.sedml/report
creating attribute sedmlDataSetIds in /fig3a.sedml/report
creating attribute sedmlDataSetLabels in /fig3a.sedml/report
creating attribute sedmlDataSetNames in /fig3a.sedml/report
creating attribute sedmlDataSetShapes in /fig3a.sedml/report
creating attribute sedmlId in /fig3a.sedml/report
creating attribute sedmlName in /fig3a.sedml/report
creating attribute uri in /fig3a.sedml/report
creating attribute combineArchiveLocation in /fig3b.sedml
creating attribute uri in /fig3b.sedml
creating attribute _type in /fig3b.sedml/plot
creating attribute sedmlDataSetDataTypes in /fig3b.sedml/plot
creating attribute sedmlDataSetIds in /fig3b.sedml/plot
creating attribute sedmlDataSetLabels in /fig3b.sedml/plot
creating attribute sedmlDataSetNames in /fig3b.sedml/plot
creating attribute sedmlDataSetShapes in /fig3b.sedml/plot
creating attribute sedmlId in /fig3b.sedml/plot
creating attribute uri in /fig3b.sedml/plot
creating attribute _type in /fig3b.sedml/report
creating attribute sedmlDataSetDataTypes in /fig3b.sedml/report
creating attribute sedmlDataSetIds in /fig3b.sedml/report
creating attribute sedmlDataSetLabels in /fig3b.sedml/report
creating attribute sedmlDataSetNames in /fig3b.sedml/report
creating attribute sedmlDataSetShapes in /fig3b.sedml/report
creating attribute sedmlId in /fig3b.sedml/report
creating attribute sedmlName in /fig3b.sedml/report
creating attribute uri in /fig3b.sedml/report
creating attribute combineArchiveLocation in /fig3c.sedml
creating attribute uri in /fig3c.sedml
creating attribute _type in /fig3c.sedml/plot
creating attribute sedmlDataSetDataTypes in /fig3c.sedml/plot
creating attribute sedmlDataSetIds in /fig3c.sedml/plot
creating attribute sedmlDataSetLabels in /fig3c.sedml/plot
creating attribute sedmlDataSetNames in /fig3c.sedml/plot
creating attribute sedmlDataSetShapes in /fig3c.sedml/plot
creating attribute sedmlId in /fig3c.sedml/plot
creating attribute uri in /fig3c.sedml/plot
creating attribute _type in /fig3c.sedml/report
creating attribute sedmlDataSetDataTypes in /fig3c.sedml/report
creating attribute sedmlDataSetIds in /fig3c.sedml/report
creating attribute sedmlDataSetLabels in /fig3c.sedml/report
creating attribute sedmlDataSetNames in /fig3c.sedml/report
creating attribute sedmlDataSetShapes in /fig3c.sedml/report
creating attribute sedmlId in /fig3c.sedml/report
creating attribute sedmlName in /fig3c.sedml/report
creating attribute uri in /fig3c.sedml/report
creating attribute combineArchiveLocation in /fig3d.sedml
creating attribute uri in /fig3d.sedml
creating attribute _type in /fig3d.sedml/plot
creating attribute sedmlDataSetDataTypes in /fig3d.sedml/plot
creating attribute sedmlDataSetIds in /fig3d.sedml/plot
creating attribute sedmlDataSetLabels in /fig3d.sedml/plot
creating attribute sedmlDataSetNames in /fig3d.sedml/plot
creating attribute sedmlDataSetShapes in /fig3d.sedml/plot
creating attribute sedmlId in /fig3d.sedml/plot
creating attribute uri in /fig3d.sedml/plot
creating attribute _type in /fig3d.sedml/report
creating attribute sedmlDataSetDataTypes in /fig3d.sedml/report
creating attribute sedmlDataSetIds in /fig3d.sedml/report
creating attribute sedmlDataSetLabels in /fig3d.sedml/report
creating attribute sedmlDataSetNames in /fig3d.sedml/report
creating attribute sedmlDataSetShapes in /fig3d.sedml/report
creating attribute sedmlId in /fig3d.sedml/report
creating attribute sedmlName in /fig3d.sedml/report
creating attribute uri in /fig3d.sedml/report
create_links: /
got link: fig3a.sedml
got link: fig3b.sedml
got link: fig3c.sedml
got link: fig3d.sedml
create_links: /fig3a.sedml
got link: plot
got link: report
create_links: /fig3b.sedml
got link: plot
got link: report
create_links: /fig3c.sedml
got link: plot
got link: report
create_links: /fig3d.sedml
got link: plot
got link: report
write_dataset src: /fig3a.sedml/plot to tgt: /fig3a.sedml/plot, shape: (3, 1001), type: float64
iterating over chunks for /fig3a.sedml/plot
writing dataset data for slice: (slice(0, 3, 1), slice(0, 1001, 1))
done with dataload for /fig3a.sedml/plot
write_dataset src: /fig3a.sedml/report to tgt: /fig3a.sedml/report, shape: (5, 1001), type: float64
iterating over chunks for /fig3a.sedml/report
writing dataset data for slice: (slice(0, 5, 1), slice(0, 1001, 1))
done with dataload for /fig3a.sedml/report
write_dataset src: /fig3b.sedml/plot to tgt: /fig3b.sedml/plot, shape: (3, 1001), type: float64
iterating over chunks for /fig3b.sedml/plot
writing dataset data for slice: (slice(0, 3, 1), slice(0, 1001, 1))
done with dataload for /fig3b.sedml/plot
write_dataset src: /fig3b.sedml/report to tgt: /fig3b.sedml/report, shape: (13, 1001), type: float64
iterating over chunks for /fig3b.sedml/report
writing dataset data for slice: (slice(0, 13, 1), slice(0, 1001, 1))
done with dataload for /fig3b.sedml/report
write_dataset src: /fig3c.sedml/plot to tgt: /fig3c.sedml/plot, shape: (3, 1001), type: float64
iterating over chunks for /fig3c.sedml/plot
writing dataset data for slice: (slice(0, 3, 1), slice(0, 1001, 1))
done with dataload for /fig3c.sedml/plot
write_dataset src: /fig3c.sedml/report to tgt: /fig3c.sedml/report, shape: (13, 1001), type: float64
iterating over chunks for /fig3c.sedml/report
writing dataset data for slice: (slice(0, 13, 1), slice(0, 1001, 1))
done with dataload for /fig3c.sedml/report
write_dataset src: /fig3d.sedml/plot to tgt: /fig3d.sedml/plot, shape: (3, 1001), type: float64
iterating over chunks for /fig3d.sedml/plot
writing dataset data for slice: (slice(0, 3, 1), slice(0, 1001, 1))
done with dataload for /fig3d.sedml/plot
write_dataset src: /fig3d.sedml/report to tgt: /fig3d.sedml/report, shape: (13, 1001), type: float64
iterating over chunks for /fig3d.sedml/report
writing dataset data for slice: (slice(0, 13, 1), slice(0, 1001, 1))
done with dataload for /fig3d.sedml/report
load_file complete
File outputs/reports.h5 uploaded to domain: /results/621d42beb50991044c79ae3e

[0;36m================================================== Zipping outputs ==================================================[0m
  adding: outputs/ (stored 0%)
