[0;36mThank you for using runBioSimulations![0m

[0;36m================================================ Loading Singularity ================================================[0m

[0;36m========================================== Downloading COMBINE/OMEX archive =========================================[0m
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[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================[0m
INFO:    Using cached SIF image
/usr/local/lib/python3.9/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mCOMBINE/OMEX archive has warnings.
  - The manifest does not include its parent COMBINE/OMEX archive. Manifests should include their parent COMBINE/OMEX archives.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
 [34msucceeded[0m

  Executed 1 tasks and 2 outputs:
    Tasks:
      Succeeded: 1
      Skipped: 0
      Failed: 0
    Outputs:
      Succeeded: 2
      Skipped: 0
      Failed: 0

Bundling outputs ...
Cleaning up ...

============= SUMMARY =============
Executed 1 SED documents:
  SED documents (1):
    Succeeded: 1
    Skipped: 0
    Failed: 0
  Tasks (1):
    Succeeded: 1
    Skipped: 0
    Failed: 0
  Outputs (2):
    Succeeded: 2
    Skipped: 0
    Failed: 0


[0;36m====================================== Saving contents of COMBINE/OMEX archive ======================================[0m
Archive:  archive.omex
  inflating: contents/readme.html    
  inflating: contents/ramp_xpp.m     
  inflating: contents/run_twocomp.m  
  inflating: contents/ramp.m         
  inflating: contents/twocompart_mnmodel.ode  
  inflating: contents/twocompart_mnmodel.sedml  
  inflating: contents/metadata.rdf   
  inflating: contents/screenshot.jpg  
  inflating: contents/manifest.xml   
Completed 1.1 KiB/295.0 KiB (9.4 KiB/s) with 9 file(s) remaining
upload: contents/ramp.m to s3://files.biosimulations.org/simulations/621d42ab87550e369891baa0/contents/ramp.m
Completed 1.1 KiB/295.0 KiB (9.4 KiB/s) with 8 file(s) remaining
Completed 2.3 KiB/295.0 KiB (18.6 KiB/s) with 8 file(s) remaining
upload: contents/ramp_xpp.m to s3://files.biosimulations.org/simulations/621d42ab87550e369891baa0/contents/ramp_xpp.m
Completed 2.3 KiB/295.0 KiB (18.6 KiB/s) with 7 file(s) remaining
Completed 3.2 KiB/295.0 KiB (24.6 KiB/s) with 7 file(s) remaining
upload: contents/manifest.xml to s3://files.biosimulations.org/simulations/621d42ab87550e369891baa0/contents/manifest.xml
Completed 3.2 KiB/295.0 KiB (24.6 KiB/s) with 6 file(s) remaining
Completed 161.3 KiB/295.0 KiB (1.0 MiB/s) with 6 file(s) remaining
upload: contents/metadata.rdf to s3://files.biosimulations.org/simulations/621d42ab87550e369891baa0/contents/metadata.rdf
Completed 161.3 KiB/295.0 KiB (1.0 MiB/s) with 5 file(s) remaining
Completed 162.6 KiB/295.0 KiB (1014.1 KiB/s) with 5 file(s) remaining
upload: contents/readme.html to s3://files.biosimulations.org/simulations/621d42ab87550e369891baa0/contents/readme.html
Completed 162.6 KiB/295.0 KiB (1014.1 KiB/s) with 4 file(s) remaining
Completed 176.7 KiB/295.0 KiB (1.0 MiB/s) with 4 file(s) remaining   
upload: contents/twocompart_mnmodel.sedml to s3://files.biosimulations.org/simulations/621d42ab87550e369891baa0/contents/twocompart_mnmodel.sedml
Completed 176.7 KiB/295.0 KiB (1.0 MiB/s) with 3 file(s) remaining
Completed 285.5 KiB/295.0 KiB (1.6 MiB/s) with 3 file(s) remaining
upload: contents/screenshot.jpg to s3://files.biosimulations.org/simulations/621d42ab87550e369891baa0/contents/screenshot.jpg
Completed 285.5 KiB/295.0 KiB (1.6 MiB/s) with 2 file(s) remaining
Completed 289.6 KiB/295.0 KiB (1.6 MiB/s) with 2 file(s) remaining
upload: contents/twocompart_mnmodel.ode to s3://files.biosimulations.org/simulations/621d42ab87550e369891baa0/contents/twocompart_mnmodel.ode
Completed 289.6 KiB/295.0 KiB (1.6 MiB/s) with 1 file(s) remaining
Completed 295.0 KiB/295.0 KiB (1.5 MiB/s) with 1 file(s) remaining
upload: contents/run_twocomp.m to s3://files.biosimulations.org/simulations/621d42ab87550e369891baa0/contents/run_twocomp.m

[0;36m=================================================== Saving results ==================================================[0m
creating group /twocompart_mnmodel.sedml
creating dataset /twocompart_mnmodel.sedml/plot, shape: (2, 1001), type: float64
dataset created, uuid: d-5228d7e1-878804c2-c019-4ae972-b5b30b, chunk_size: (2, 1001)
creating dataset /twocompart_mnmodel.sedml/report, shape: (24, 1001), type: float64
dataset created, uuid: d-5228d7e1-878804c2-cccb-0656f3-f1a717, chunk_size: (24, 1001)
creating attribute combineArchiveLocation in /twocompart_mnmodel.sedml
creating attribute uri in /twocompart_mnmodel.sedml
creating attribute _type in /twocompart_mnmodel.sedml/plot
creating attribute sedmlDataSetDataTypes in /twocompart_mnmodel.sedml/plot
creating attribute sedmlDataSetIds in /twocompart_mnmodel.sedml/plot
creating attribute sedmlDataSetLabels in /twocompart_mnmodel.sedml/plot
creating attribute sedmlDataSetNames in /twocompart_mnmodel.sedml/plot
creating attribute sedmlDataSetShapes in /twocompart_mnmodel.sedml/plot
creating attribute sedmlId in /twocompart_mnmodel.sedml/plot
creating attribute uri in /twocompart_mnmodel.sedml/plot
creating attribute _type in /twocompart_mnmodel.sedml/report
creating attribute sedmlDataSetDataTypes in /twocompart_mnmodel.sedml/report
creating attribute sedmlDataSetIds in /twocompart_mnmodel.sedml/report
creating attribute sedmlDataSetLabels in /twocompart_mnmodel.sedml/report
creating attribute sedmlDataSetNames in /twocompart_mnmodel.sedml/report
creating attribute sedmlDataSetShapes in /twocompart_mnmodel.sedml/report
creating attribute sedmlId in /twocompart_mnmodel.sedml/report
creating attribute sedmlName in /twocompart_mnmodel.sedml/report
creating attribute uri in /twocompart_mnmodel.sedml/report
create_links: /
got link: twocompart_mnmodel.sedml
create_links: /twocompart_mnmodel.sedml
got link: plot
got link: report
write_dataset src: /twocompart_mnmodel.sedml/plot to tgt: /twocompart_mnmodel.sedml/plot, shape: (2, 1001), type: float64
iterating over chunks for /twocompart_mnmodel.sedml/plot
writing dataset data for slice: (slice(0, 2, 1), slice(0, 1001, 1))
done with dataload for /twocompart_mnmodel.sedml/plot
write_dataset src: /twocompart_mnmodel.sedml/report to tgt: /twocompart_mnmodel.sedml/report, shape: (24, 1001), type: float64
iterating over chunks for /twocompart_mnmodel.sedml/report
writing dataset data for slice: (slice(0, 24, 1), slice(0, 1001, 1))
done with dataload for /twocompart_mnmodel.sedml/report
load_file complete
File outputs/reports.h5 uploaded to domain: /results/621d42ab87550e369891baa0

[0;36m================================================== Zipping outputs ==================================================[0m
  adding: outputs/ (stored 0%)
