[0;36mThank you for using runBioSimulations![0m

[0;36m================================================ Loading Singularity ================================================[0m

[0;36m========================================== Downloading COMBINE/OMEX archive =========================================[0m
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100   139  100   139    0     0    472      0 --:--:-- --:--:-- --:--:--   471
100   139  100   139    0     0    466      0 --:--:-- --:--:-- --:--:--   466

100   99k  100   99k    0     0   243k      0 --:--:-- --:--:-- --:--:--  243k

[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================[0m
INFO:    Using cached SIF image
/usr/local/lib/python3.9/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mCOMBINE/OMEX archive has warnings.
  - The manifest does not include its parent COMBINE/OMEX archive. Manifests should include their parent COMBINE/OMEX archives.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/usr/local/lib/python3.9/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe SED document is potentially incorrect.
  - Model `model` has warnings.
    - The model file `AP-sim-Ca.ode` has warnings.
      - The XPP file may be not be formulated correctly
        - INA is a duplicate name
        - IK is a duplicate name
        - ICA is a duplicate name[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/usr/local/lib/python3.9/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe COMBINE/OMEX archive has warnings.
  - The SED-ML file at location `AP-sim-Ca.sedml` has warnings.
    - Model `model` has warnings.
      - The model file `AP-sim-Ca.ode` has warnings.
        - The XPP file may be not be formulated correctly
          - INA is a duplicate name
          - IK is a duplicate name
          - ICA is a duplicate name[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
 [34msucceeded[0m

  Executed 1 tasks and 2 outputs:
    Tasks:
      Succeeded: 1
      Skipped: 0
      Failed: 0
    Outputs:
      Succeeded: 2
      Skipped: 0
      Failed: 0

Bundling outputs ...
Cleaning up ...

============= SUMMARY =============
Executed 1 SED documents:
  SED documents (1):
    Succeeded: 1
    Skipped: 0
    Failed: 0
  Tasks (1):
    Succeeded: 1
    Skipped: 0
    Failed: 0
  Outputs (2):
    Succeeded: 2
    Skipped: 0
    Failed: 0


[0;36m====================================== Saving contents of COMBINE/OMEX archive ======================================[0m
Archive:  archive.omex
  inflating: contents/AP-sim-Ca.ode  
  inflating: contents/Readme.html    
  inflating: contents/AP-sim-Ca.sedml  
  inflating: contents/metadata.rdf   
  inflating: contents/AP-sim-Ca.JPG  
  inflating: contents/manifest.xml   
Completed 1.2 KiB/160.9 KiB (20.8 KiB/s) with 6 file(s) remaining
upload: contents/AP-sim-Ca.ode to s3://files.biosimulations.org/simulations/621d42a987550e369891ba92/contents/AP-sim-Ca.ode
Completed 1.2 KiB/160.9 KiB (20.8 KiB/s) with 5 file(s) remaining
Completed 1.9 KiB/160.9 KiB (16.6 KiB/s) with 5 file(s) remaining
Completed 7.6 KiB/160.9 KiB (66.2 KiB/s) with 5 file(s) remaining
upload: contents/AP-sim-Ca.sedml to s3://files.biosimulations.org/simulations/621d42a987550e369891ba92/contents/AP-sim-Ca.sedml
Completed 7.6 KiB/160.9 KiB (66.2 KiB/s) with 4 file(s) remaining
upload: contents/manifest.xml to s3://files.biosimulations.org/simulations/621d42a987550e369891ba92/contents/manifest.xml
Completed 7.6 KiB/160.9 KiB (66.2 KiB/s) with 3 file(s) remaining
Completed 67.5 KiB/160.9 KiB (462.4 KiB/s) with 3 file(s) remaining
upload: contents/AP-sim-Ca.JPG to s3://files.biosimulations.org/simulations/621d42a987550e369891ba92/contents/AP-sim-Ca.JPG
Completed 67.5 KiB/160.9 KiB (462.4 KiB/s) with 2 file(s) remaining
Completed 69.7 KiB/160.9 KiB (446.7 KiB/s) with 2 file(s) remaining
upload: contents/Readme.html to s3://files.biosimulations.org/simulations/621d42a987550e369891ba92/contents/Readme.html
Completed 69.7 KiB/160.9 KiB (446.7 KiB/s) with 1 file(s) remaining
Completed 160.9 KiB/160.9 KiB (755.7 KiB/s) with 1 file(s) remaining
upload: contents/metadata.rdf to s3://files.biosimulations.org/simulations/621d42a987550e369891ba92/contents/metadata.rdf

[0;36m=================================================== Saving results ==================================================[0m
creating group /AP-sim-Ca.sedml
creating dataset /AP-sim-Ca.sedml/plot, shape: (2, 1001), type: float64
dataset created, uuid: d-dcd7fe5e-ece57e40-a574-0632d6-e95829, chunk_size: (2, 1001)
creating dataset /AP-sim-Ca.sedml/report, shape: (9, 1001), type: float64
dataset created, uuid: d-dcd7fe5e-ece57e40-0e5e-e178aa-f61196, chunk_size: (9, 1001)
creating attribute combineArchiveLocation in /AP-sim-Ca.sedml
creating attribute uri in /AP-sim-Ca.sedml
creating attribute _type in /AP-sim-Ca.sedml/plot
creating attribute sedmlDataSetDataTypes in /AP-sim-Ca.sedml/plot
creating attribute sedmlDataSetIds in /AP-sim-Ca.sedml/plot
creating attribute sedmlDataSetLabels in /AP-sim-Ca.sedml/plot
creating attribute sedmlDataSetNames in /AP-sim-Ca.sedml/plot
creating attribute sedmlDataSetShapes in /AP-sim-Ca.sedml/plot
creating attribute sedmlId in /AP-sim-Ca.sedml/plot
creating attribute uri in /AP-sim-Ca.sedml/plot
creating attribute _type in /AP-sim-Ca.sedml/report
creating attribute sedmlDataSetDataTypes in /AP-sim-Ca.sedml/report
creating attribute sedmlDataSetIds in /AP-sim-Ca.sedml/report
creating attribute sedmlDataSetLabels in /AP-sim-Ca.sedml/report
creating attribute sedmlDataSetNames in /AP-sim-Ca.sedml/report
creating attribute sedmlDataSetShapes in /AP-sim-Ca.sedml/report
creating attribute sedmlId in /AP-sim-Ca.sedml/report
creating attribute sedmlName in /AP-sim-Ca.sedml/report
creating attribute uri in /AP-sim-Ca.sedml/report
create_links: /
got link: AP-sim-Ca.sedml
create_links: /AP-sim-Ca.sedml
got link: plot
got link: report
write_dataset src: /AP-sim-Ca.sedml/plot to tgt: /AP-sim-Ca.sedml/plot, shape: (2, 1001), type: float64
iterating over chunks for /AP-sim-Ca.sedml/plot
writing dataset data for slice: (slice(0, 2, 1), slice(0, 1001, 1))
done with dataload for /AP-sim-Ca.sedml/plot
write_dataset src: /AP-sim-Ca.sedml/report to tgt: /AP-sim-Ca.sedml/report, shape: (9, 1001), type: float64
iterating over chunks for /AP-sim-Ca.sedml/report
writing dataset data for slice: (slice(0, 9, 1), slice(0, 1001, 1))
done with dataload for /AP-sim-Ca.sedml/report
load_file complete
File outputs/reports.h5 uploaded to domain: /results/621d42a987550e369891ba92

[0;36m================================================== Zipping outputs ==================================================[0m
  adding: outputs/ (stored 0%)
