[0;36mThank you for using runBioSimulations![0m

[0;36m================================================ Loading Singularity ================================================[0m

[0;36m========================================== Downloading COMBINE/OMEX archive =========================================[0m
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[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================[0m
INFO:    Using cached SIF image
/usr/local/lib/python3.9/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mCOMBINE/OMEX archive has warnings.
  - The manifest does not include its parent COMBINE/OMEX archive. Manifests should include their parent COMBINE/OMEX archives.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
 [34msucceeded[0m

  Executed 1 tasks and 2 outputs:
    Tasks:
      Succeeded: 1
      Skipped: 0
      Failed: 0
    Outputs:
      Succeeded: 2
      Skipped: 0
      Failed: 0

Bundling outputs ...
Cleaning up ...

============= SUMMARY =============
Executed 2 SED documents:
  SED documents (2):
    Succeeded: 2
    Skipped: 0
    Failed: 0
  Tasks (2):
    Succeeded: 2
    Skipped: 0
    Failed: 0
  Outputs (4):
    Succeeded: 4
    Skipped: 0
    Failed: 0


[0;36m====================================== Saving contents of COMBINE/OMEX archive ======================================[0m
Archive:  archive.omex
  inflating: contents/readme.html    
  inflating: contents/2d-ML.ode      
  inflating: contents/3d-ML.ode      
  inflating: contents/2d-ML.sedml    
  inflating: contents/3d-ML.sedml    
  inflating: contents/metadata.rdf   
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[0;36m=================================================== Saving results ==================================================[0m
creating group /2d-ML.sedml
creating dataset /2d-ML.sedml/plot, shape: (2, 1001), type: float64
dataset created, uuid: d-8f5fcf5e-6eead536-e1e1-e5a670-956341, chunk_size: (2, 1001)
creating dataset /2d-ML.sedml/report, shape: (3, 1001), type: float64
dataset created, uuid: d-8f5fcf5e-6eead536-25af-cc9d58-bbcf4a, chunk_size: (3, 1001)
creating group /3d-ML.sedml
creating dataset /3d-ML.sedml/plot, shape: (2, 1001), type: float64
dataset created, uuid: d-8f5fcf5e-6eead536-ac36-b772f3-7b287a, chunk_size: (2, 1001)
creating dataset /3d-ML.sedml/report, shape: (4, 1001), type: float64
dataset created, uuid: d-8f5fcf5e-6eead536-7aa5-43c7a7-c3ea51, chunk_size: (4, 1001)
creating attribute combineArchiveLocation in /2d-ML.sedml
creating attribute uri in /2d-ML.sedml
creating attribute _type in /2d-ML.sedml/plot
creating attribute sedmlDataSetDataTypes in /2d-ML.sedml/plot
creating attribute sedmlDataSetIds in /2d-ML.sedml/plot
creating attribute sedmlDataSetLabels in /2d-ML.sedml/plot
creating attribute sedmlDataSetNames in /2d-ML.sedml/plot
creating attribute sedmlDataSetShapes in /2d-ML.sedml/plot
creating attribute sedmlId in /2d-ML.sedml/plot
creating attribute uri in /2d-ML.sedml/plot
creating attribute _type in /2d-ML.sedml/report
creating attribute sedmlDataSetDataTypes in /2d-ML.sedml/report
creating attribute sedmlDataSetIds in /2d-ML.sedml/report
creating attribute sedmlDataSetLabels in /2d-ML.sedml/report
creating attribute sedmlDataSetNames in /2d-ML.sedml/report
creating attribute sedmlDataSetShapes in /2d-ML.sedml/report
creating attribute sedmlId in /2d-ML.sedml/report
creating attribute sedmlName in /2d-ML.sedml/report
creating attribute uri in /2d-ML.sedml/report
creating attribute combineArchiveLocation in /3d-ML.sedml
creating attribute uri in /3d-ML.sedml
creating attribute _type in /3d-ML.sedml/plot
creating attribute sedmlDataSetDataTypes in /3d-ML.sedml/plot
creating attribute sedmlDataSetIds in /3d-ML.sedml/plot
creating attribute sedmlDataSetLabels in /3d-ML.sedml/plot
creating attribute sedmlDataSetNames in /3d-ML.sedml/plot
creating attribute sedmlDataSetShapes in /3d-ML.sedml/plot
creating attribute sedmlId in /3d-ML.sedml/plot
creating attribute uri in /3d-ML.sedml/plot
creating attribute _type in /3d-ML.sedml/report
creating attribute sedmlDataSetDataTypes in /3d-ML.sedml/report
creating attribute sedmlDataSetIds in /3d-ML.sedml/report
creating attribute sedmlDataSetLabels in /3d-ML.sedml/report
creating attribute sedmlDataSetNames in /3d-ML.sedml/report
creating attribute sedmlDataSetShapes in /3d-ML.sedml/report
creating attribute sedmlId in /3d-ML.sedml/report
creating attribute sedmlName in /3d-ML.sedml/report
creating attribute uri in /3d-ML.sedml/report
create_links: /
got link: 2d-ML.sedml
got link: 3d-ML.sedml
create_links: /2d-ML.sedml
got link: plot
got link: report
create_links: /3d-ML.sedml
got link: plot
got link: report
write_dataset src: /2d-ML.sedml/plot to tgt: /2d-ML.sedml/plot, shape: (2, 1001), type: float64
iterating over chunks for /2d-ML.sedml/plot
writing dataset data for slice: (slice(0, 2, 1), slice(0, 1001, 1))
done with dataload for /2d-ML.sedml/plot
write_dataset src: /2d-ML.sedml/report to tgt: /2d-ML.sedml/report, shape: (3, 1001), type: float64
iterating over chunks for /2d-ML.sedml/report
writing dataset data for slice: (slice(0, 3, 1), slice(0, 1001, 1))
done with dataload for /2d-ML.sedml/report
write_dataset src: /3d-ML.sedml/plot to tgt: /3d-ML.sedml/plot, shape: (2, 1001), type: float64
iterating over chunks for /3d-ML.sedml/plot
writing dataset data for slice: (slice(0, 2, 1), slice(0, 1001, 1))
done with dataload for /3d-ML.sedml/plot
write_dataset src: /3d-ML.sedml/report to tgt: /3d-ML.sedml/report, shape: (4, 1001), type: float64
iterating over chunks for /3d-ML.sedml/report
writing dataset data for slice: (slice(0, 4, 1), slice(0, 1001, 1))
done with dataload for /3d-ML.sedml/report
load_file complete
File outputs/reports.h5 uploaded to domain: /results/621d42a687550e369891ba75

[0;36m================================================== Zipping outputs ==================================================[0m
  adding: outputs/ (stored 0%)
