[0;36mThank you for using runBioSimulations![0m

[0;36m================================================ Loading Singularity ================================================[0m

[0;36m============================================ Downloading COMBINE archive ============================================[0m
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100   139  100   139    0     0    395      0 --:--:-- --:--:-- --:--:--   396

100 64521  100 64521    0     0   135k      0 --:--:-- --:--:-- --:--:--  135k

[0;36m============================================= Executing COMBINE archive =============================================[0m
INFO:    Using cached SIF image
/usr/local/lib/python3.9/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe SED document is potentially incorrect.
  - Model `model_wt` may be invalid.
    - The model file `model.xml` may be invalid.
      - In situations where a mathematical expression refers to a compartment, species or parameter, it is necessary to know the units of the object to establish unit consistency. In models where the units of an object have not been declared, libSBML does not yet have the functionality to accurately verify the consistency of the units in mathematical expressions referring to that object. 
         The units of the <compartment> 'comp1' cannot be fully checked. Unit consistency reported as either no errors or further unit errors related to this object may not be accurate.
        
      - If neither the attribute 'units' nor the attribute 'spatialDimensions' on a Compartment object is set, the unit associated with that compartment's size is undefined.
        Reference: L3V1 Section 4.5
         The <compartment> 'comp1' has no discernable units.
        
  - Model `model_del_Cln2` may be invalid.
    - The changes of the model may be invalid.
      - Change 1 may be invalid.
        - XPath could not be validated.
      - Change 2 may be invalid.
        - XPath could not be validated.
  - Model `model_del_Cln3` may be invalid.
    - The changes of the model may be invalid.
      - Change 1 may be invalid.
        - XPath could not be validated.
      - Change 2 may be invalid.
        - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Cln3` may be invalid.
    - Variable `del_Cln2_var_Cln3` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_SMBF` may be invalid.
    - Variable `del_Cln2_var_SMBF` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Cln2` may be invalid.
    - Variable `del_Cln2_var_Cln2` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Clb5` may be invalid.
    - Variable `del_Cln2_var_Clb5` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Yhp1` may be invalid.
    - Variable `del_Cln2_var_Yhp1` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Clb2` may be invalid.
    - Variable `del_Cln2_var_Clb2` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_SFF` may be invalid.
    - Variable `del_Cln2_var_SFF` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Cdc20` may be invalid.
    - Variable `del_Cln2_var_Cdc20` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_FEAR` may be invalid.
    - Variable `del_Cln2_var_FEAR` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_MEN` may be invalid.
    - Variable `del_Cln2_var_MEN` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Cdc14` may be invalid.
    - Variable `del_Cln2_var_Cdc14` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Swi5` may be invalid.
    - Variable `del_Cln2_var_Swi5` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_CKI` may be invalid.
    - Variable `del_Cln2_var_CKI` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Cdh1` may be invalid.
    - Variable `del_Cln2_var_Cdh1` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_S` may be invalid.
    - Variable `del_Cln2_var_S` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_B` may be invalid.
    - Variable `del_Cln2_var_B` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_M` may be invalid.
    - Variable `del_Cln2_var_M` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_CD` may be invalid.
    - Variable `del_Cln2_var_CD` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Cln3` may be invalid.
    - Variable `del_Cln3_var_Cln3` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_SMBF` may be invalid.
    - Variable `del_Cln3_var_SMBF` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Cln2` may be invalid.
    - Variable `del_Cln3_var_Cln2` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Clb5` may be invalid.
    - Variable `del_Cln3_var_Clb5` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Yhp1` may be invalid.
    - Variable `del_Cln3_var_Yhp1` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Clb2` may be invalid.
    - Variable `del_Cln3_var_Clb2` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_SFF` may be invalid.
    - Variable `del_Cln3_var_SFF` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Cdc20` may be invalid.
    - Variable `del_Cln3_var_Cdc20` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_FEAR` may be invalid.
    - Variable `del_Cln3_var_FEAR` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_MEN` may be invalid.
    - Variable `del_Cln3_var_MEN` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Cdc14` may be invalid.
    - Variable `del_Cln3_var_Cdc14` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Swi5` may be invalid.
    - Variable `del_Cln3_var_Swi5` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_CKI` may be invalid.
    - Variable `del_Cln3_var_CKI` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Cdh1` may be invalid.
    - Variable `del_Cln3_var_Cdh1` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_S` may be invalid.
    - Variable `del_Cln3_var_S` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_B` may be invalid.
    - Variable `del_Cln3_var_B` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_M` may be invalid.
    - Variable `del_Cln3_var_M` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_CD` may be invalid.
    - Variable `del_Cln3_var_CD` may be invalid.
      - XPath could not be validated.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/usr/local/lib/python3.9/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe COMBINE/OMEX archive may be invalid.
  - The SED-ML file at location `simulation.sedml` may be invalid.
    - Model `model_wt` may be invalid.
      - The model file `model.xml` may be invalid.
        - In situations where a mathematical expression refers to a compartment, species or parameter, it is necessary to know the units of the object to establish unit consistency. In models where the units of an object have not been declared, libSBML does not yet have the functionality to accurately verify the consistency of the units in mathematical expressions referring to that object. 
           The units of the <compartment> 'comp1' cannot be fully checked. Unit consistency reported as either no errors or further unit errors related to this object may not be accurate.
          
        - If neither the attribute 'units' nor the attribute 'spatialDimensions' on a Compartment object is set, the unit associated with that compartment's size is undefined.
          Reference: L3V1 Section 4.5
           The <compartment> 'comp1' has no discernable units.
          
    - Model `model_del_Cln2` may be invalid.
      - The changes of the model may be invalid.
        - Change 1 may be invalid.
          - XPath could not be validated.
        - Change 2 may be invalid.
          - XPath could not be validated.
    - Model `model_del_Cln3` may be invalid.
      - The changes of the model may be invalid.
        - Change 1 may be invalid.
          - XPath could not be validated.
        - Change 2 may be invalid.
          - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_Cln3` may be invalid.
      - Variable `del_Cln2_var_Cln3` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_SMBF` may be invalid.
      - Variable `del_Cln2_var_SMBF` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_Cln2` may be invalid.
      - Variable `del_Cln2_var_Cln2` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_Clb5` may be invalid.
      - Variable `del_Cln2_var_Clb5` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_Yhp1` may be invalid.
      - Variable `del_Cln2_var_Yhp1` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_Clb2` may be invalid.
      - Variable `del_Cln2_var_Clb2` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_SFF` may be invalid.
      - Variable `del_Cln2_var_SFF` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_Cdc20` may be invalid.
      - Variable `del_Cln2_var_Cdc20` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_FEAR` may be invalid.
      - Variable `del_Cln2_var_FEAR` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_MEN` may be invalid.
      - Variable `del_Cln2_var_MEN` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_Cdc14` may be invalid.
      - Variable `del_Cln2_var_Cdc14` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_Swi5` may be invalid.
      - Variable `del_Cln2_var_Swi5` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_CKI` may be invalid.
      - Variable `del_Cln2_var_CKI` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_Cdh1` may be invalid.
      - Variable `del_Cln2_var_Cdh1` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_S` may be invalid.
      - Variable `del_Cln2_var_S` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_B` may be invalid.
      - Variable `del_Cln2_var_B` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_M` may be invalid.
      - Variable `del_Cln2_var_M` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln2_data_generator_CD` may be invalid.
      - Variable `del_Cln2_var_CD` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_Cln3` may be invalid.
      - Variable `del_Cln3_var_Cln3` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_SMBF` may be invalid.
      - Variable `del_Cln3_var_SMBF` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_Cln2` may be invalid.
      - Variable `del_Cln3_var_Cln2` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_Clb5` may be invalid.
      - Variable `del_Cln3_var_Clb5` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_Yhp1` may be invalid.
      - Variable `del_Cln3_var_Yhp1` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_Clb2` may be invalid.
      - Variable `del_Cln3_var_Clb2` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_SFF` may be invalid.
      - Variable `del_Cln3_var_SFF` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_Cdc20` may be invalid.
      - Variable `del_Cln3_var_Cdc20` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_FEAR` may be invalid.
      - Variable `del_Cln3_var_FEAR` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_MEN` may be invalid.
      - Variable `del_Cln3_var_MEN` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_Cdc14` may be invalid.
      - Variable `del_Cln3_var_Cdc14` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_Swi5` may be invalid.
      - Variable `del_Cln3_var_Swi5` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_CKI` may be invalid.
      - Variable `del_Cln3_var_CKI` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_Cdh1` may be invalid.
      - Variable `del_Cln3_var_Cdh1` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_S` may be invalid.
      - Variable `del_Cln3_var_S` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_B` may be invalid.
      - Variable `del_Cln3_var_B` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_M` may be invalid.
      - Variable `del_Cln3_var_M` may be invalid.
        - XPath could not be validated.
    - Data generator `del_Cln3_data_generator_CD` may be invalid.
      - Variable `del_Cln3_var_CD` may be invalid.
        - XPath could not be validated.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
/usr/local/lib/python3.9/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: [33mThe SED document is potentially incorrect.
  - Model `model_del_Cln2` may be invalid.
    - The changes of the model may be invalid.
      - Change 1 may be invalid.
        - XPath could not be validated.
      - Change 2 may be invalid.
        - XPath could not be validated.
  - Model `model_del_Cln3` may be invalid.
    - The changes of the model may be invalid.
      - Change 1 may be invalid.
        - XPath could not be validated.
      - Change 2 may be invalid.
        - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Cln3` may be invalid.
    - Variable `del_Cln2_var_Cln3` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_SMBF` may be invalid.
    - Variable `del_Cln2_var_SMBF` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Cln2` may be invalid.
    - Variable `del_Cln2_var_Cln2` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Clb5` may be invalid.
    - Variable `del_Cln2_var_Clb5` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Yhp1` may be invalid.
    - Variable `del_Cln2_var_Yhp1` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Clb2` may be invalid.
    - Variable `del_Cln2_var_Clb2` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_SFF` may be invalid.
    - Variable `del_Cln2_var_SFF` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Cdc20` may be invalid.
    - Variable `del_Cln2_var_Cdc20` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_FEAR` may be invalid.
    - Variable `del_Cln2_var_FEAR` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_MEN` may be invalid.
    - Variable `del_Cln2_var_MEN` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Cdc14` may be invalid.
    - Variable `del_Cln2_var_Cdc14` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Swi5` may be invalid.
    - Variable `del_Cln2_var_Swi5` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_CKI` may be invalid.
    - Variable `del_Cln2_var_CKI` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_Cdh1` may be invalid.
    - Variable `del_Cln2_var_Cdh1` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_S` may be invalid.
    - Variable `del_Cln2_var_S` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_B` may be invalid.
    - Variable `del_Cln2_var_B` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_M` may be invalid.
    - Variable `del_Cln2_var_M` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln2_data_generator_CD` may be invalid.
    - Variable `del_Cln2_var_CD` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Cln3` may be invalid.
    - Variable `del_Cln3_var_Cln3` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_SMBF` may be invalid.
    - Variable `del_Cln3_var_SMBF` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Cln2` may be invalid.
    - Variable `del_Cln3_var_Cln2` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Clb5` may be invalid.
    - Variable `del_Cln3_var_Clb5` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Yhp1` may be invalid.
    - Variable `del_Cln3_var_Yhp1` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Clb2` may be invalid.
    - Variable `del_Cln3_var_Clb2` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_SFF` may be invalid.
    - Variable `del_Cln3_var_SFF` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Cdc20` may be invalid.
    - Variable `del_Cln3_var_Cdc20` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_FEAR` may be invalid.
    - Variable `del_Cln3_var_FEAR` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_MEN` may be invalid.
    - Variable `del_Cln3_var_MEN` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Cdc14` may be invalid.
    - Variable `del_Cln3_var_Cdc14` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Swi5` may be invalid.
    - Variable `del_Cln3_var_Swi5` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_CKI` may be invalid.
    - Variable `del_Cln3_var_CKI` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_Cdh1` may be invalid.
    - Variable `del_Cln3_var_Cdh1` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_S` may be invalid.
    - Variable `del_Cln3_var_S` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_B` may be invalid.
    - Variable `del_Cln3_var_B` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_M` may be invalid.
    - Variable `del_Cln3_var_M` may be invalid.
      - XPath could not be validated.
  - Data generator `del_Cln3_data_generator_CD` may be invalid.
    - Variable `del_Cln3_var_CD` may be invalid.
      - XPath could not be validated.[0m
  warnings.warn(termcolor.colored(message, Colors.warning.value), category)
 [34msucceeded[0m

  Executed 3 tasks and 3 outputs:
    Tasks:
      Succeeded: 3
      Skipped: 0
      Failed: 0
    Outputs:
      Succeeded: 3
      Skipped: 0
      Failed: 0

Bundling outputs ...
Cleaning up ...

============= SUMMARY =============
Executed 1 SED documents:
  SED documents (1):
    Succeeded: 1
    Skipped: 0
    Failed: 0
  Tasks (3):
    Succeeded: 3
    Skipped: 0
    Failed: 0
  Outputs (3):
    Succeeded: 3
    Skipped: 0
    Failed: 0

R[write to console]: Warning messages:

R[write to console]: 1: 
R[write to console]: In (function (package, help, pos = 2, lib.loc = NULL, character.only = FALSE,  :
R[write to console]: 
 
R[write to console]:  library ‘/usr/lib/R/site-library’ contains no packages

R[write to console]: 2: 
R[write to console]: In (function (package, help, pos = 2, lib.loc = NULL, character.only = FALSE,  :
R[write to console]: 
 
R[write to console]:  library ‘/usr/lib/R/site-library’ contains no packages

R[write to console]: 3: 
R[write to console]: In (function (package, help, pos = 2, lib.loc = NULL, character.only = FALSE,  :
R[write to console]: 
 
R[write to console]:  library ‘/usr/lib/R/site-library’ contains no packages

R[write to console]: 4: There is no transition for the non-constant gene "Cln2"! Setting it to a constant 0! 

R[write to console]: 5: 
R[write to console]: In (function (package, help, pos = 2, lib.loc = NULL, character.only = FALSE,  :
R[write to console]: 
 
R[write to console]:  library ‘/usr/lib/R/site-library’ contains no packages

R[write to console]: 6: There is no transition for the non-constant gene "Cln3"! Setting it to a constant 0! 


[0;36m=================================================== Saving results ==================================================[0m
creating group /simulation.sedml
creating dataset /simulation.sedml/report_del_Cln2, shape: (19, 101), type: float64
dataset created, uuid: d-ca0a1cba-99949f39-bbb2-dd2669-007bb7, chunk_size: (19, 101)
creating dataset /simulation.sedml/report_del_Cln3, shape: (19, 101), type: float64
dataset created, uuid: d-ca0a1cba-99949f39-cac6-ac495d-a8507f, chunk_size: (19, 101)
creating dataset /simulation.sedml/report_wt, shape: (19, 101), type: float64
dataset created, uuid: d-ca0a1cba-99949f39-863c-ae4b4f-7fdee1, chunk_size: (19, 101)
creating attribute combineArchiveLocation in /simulation.sedml
creating attribute uri in /simulation.sedml
creating attribute _type in /simulation.sedml/report_del_Cln2
creating attribute sedmlDataSetDataTypes in /simulation.sedml/report_del_Cln2
creating attribute sedmlDataSetIds in /simulation.sedml/report_del_Cln2
creating attribute sedmlDataSetLabels in /simulation.sedml/report_del_Cln2
creating attribute sedmlDataSetNames in /simulation.sedml/report_del_Cln2
creating attribute sedmlDataSetShapes in /simulation.sedml/report_del_Cln2
creating attribute sedmlId in /simulation.sedml/report_del_Cln2
creating attribute sedmlName in /simulation.sedml/report_del_Cln2
creating attribute uri in /simulation.sedml/report_del_Cln2
creating attribute _type in /simulation.sedml/report_del_Cln3
creating attribute sedmlDataSetDataTypes in /simulation.sedml/report_del_Cln3
creating attribute sedmlDataSetIds in /simulation.sedml/report_del_Cln3
creating attribute sedmlDataSetLabels in /simulation.sedml/report_del_Cln3
creating attribute sedmlDataSetNames in /simulation.sedml/report_del_Cln3
creating attribute sedmlDataSetShapes in /simulation.sedml/report_del_Cln3
creating attribute sedmlId in /simulation.sedml/report_del_Cln3
creating attribute sedmlName in /simulation.sedml/report_del_Cln3
creating attribute uri in /simulation.sedml/report_del_Cln3
creating attribute _type in /simulation.sedml/report_wt
creating attribute sedmlDataSetDataTypes in /simulation.sedml/report_wt
creating attribute sedmlDataSetIds in /simulation.sedml/report_wt
creating attribute sedmlDataSetLabels in /simulation.sedml/report_wt
creating attribute sedmlDataSetNames in /simulation.sedml/report_wt
creating attribute sedmlDataSetShapes in /simulation.sedml/report_wt
creating attribute sedmlId in /simulation.sedml/report_wt
creating attribute sedmlName in /simulation.sedml/report_wt
creating attribute uri in /simulation.sedml/report_wt
create_links: /
got link: simulation.sedml
create_links: /simulation.sedml
got link: report_del_Cln2
got link: report_del_Cln3
got link: report_wt
write_dataset src: /simulation.sedml/report_del_Cln2 to tgt: /simulation.sedml/report_del_Cln2, shape: (19, 101), type: float64
iterating over chunks for /simulation.sedml/report_del_Cln2
writing dataset data for slice: (slice(0, 19, 1), slice(0, 101, 1))
done with dataload for /simulation.sedml/report_del_Cln2
write_dataset src: /simulation.sedml/report_del_Cln3 to tgt: /simulation.sedml/report_del_Cln3, shape: (19, 101), type: float64
iterating over chunks for /simulation.sedml/report_del_Cln3
writing dataset data for slice: (slice(0, 19, 1), slice(0, 101, 1))
done with dataload for /simulation.sedml/report_del_Cln3
write_dataset src: /simulation.sedml/report_wt to tgt: /simulation.sedml/report_wt, shape: (19, 101), type: float64
iterating over chunks for /simulation.sedml/report_wt
writing dataset data for slice: (slice(0, 19, 1), slice(0, 101, 1))
done with dataload for /simulation.sedml/report_wt
load_file complete
File outputs/reports.h5 uploaded to domain: /results/61fea483f499ccf25faafc4d

[0;36m================================================== Zipping outputs ==================================================[0m
  adding: outputs/ (stored 0%)
