{"status":"SUCCEEDED","exception":null,"skipReason":null,"output":"\u001b[0;36mThank you for using runBioSimulations!\u001b[0m\n\n\u001b[0;36m================================================ Loading Singularity ================================================\u001b[0m\n\n\u001b[0;36m=================================================== Set up storage ==================================================\u001b[0m\n\n\u001b[0;36m========================================== Downloading COMBINE/OMEX archive =========================================\u001b[0m\n  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current\n                                 Dload  Upload   Total   Spent    Left  Speed\n\r  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0\r100   139  100   139    0     0    498      0 --:--:-- --:--:-- --:--:--   500\n\r100 13790  100 13790    0     0  34462      0 --:--:-- --:--:-- --:--:-- 34462\n\n\u001b[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================\u001b[0m\nINFO:    Using cached SIF image\ndocker: Command recieved::<-i /root/archive.omex -o /root/outputs>\n<-i>\nDefault case selected\nVCell shall execute <biosimulations -i /root/archive.omex -o /root/outputs>\nWARN StatusConsoleListener The use of package scanning to locate plugins is deprecated and will be removed in a future release\nWARN StatusConsoleListener The use of package scanning to locate plugins is deprecated and will be removed in a future release\nWARN StatusConsoleListener The use of package scanning to locate plugins is deprecated and will be removed in a future release\nWARN StatusConsoleListener The use of package scanning to locate plugins is deprecated and will be removed in a future release\n INFO (CLIStandalone:36) - Starting Vcell... []{}\n INFO (BiosimulationsCommand:94) - Beginning execution []{}\n INFO (CLIPythonManager:125) - Initializing Python... []{}\n INFO (CLIPythonManager:150) - Python initialization success! []{}\n INFO (ExecuteImpl:134) - Preparing output directory... []{}\n INFO (ExecutionJob:83) - Executing OMEX archive `archive.omex` []{}\n INFO (ExecutionJob:84) - Archive location: /root/archive.omex []{}\n-----------------------------------------------------------------------------------------------------\n INFO (RunUtils:476) - TempPath Created: /tmp/vcell_temp_20399181-7eba-4f71-9887-dd498cdd474115548959752555286363 []{}\n INFO (RunUtils:476) - TempPath Created: /tmp/vcell_temp_2299fa15-2254-4402-a511-b8e4e4d8706610947406094402543596 []{}\n INFO (SedmlJob:110) - Initializing SED-ML document... []{}\nSED-ML version level not supported, import may fail\nSED-ML version level not supported, import may fail\n INFO (SedmlJob:125) - Processing SED-ML: Theinmozhi_2018.sedml []{}\n INFO (SedmlJob:161) - Found one SED-ML document with 1 model(s), 1 simulation(s), 2 task(s), 1  report(s),  5 plot2D(s), and 0 plot3D(s)\n []{}\n INFO (SedmlJob:166) - Successful translation of SED-ML file : Theinmozhi_2018.sedml []{}\n-----------------------------------------------------------------------------------------------------\n INFO (SedmlJob:170) - Creating pseudo SED-ML for HDF5 conversion... []{}\n INFO (SedmlJob:186) - Creating Biomodel from pseudo SED-ML []{}\nSED-ML version level not supported, import may fail\nSED-ML version level not supported, import may fail\n INFO (SedmlJob:261) - Building solvers and starting simulation of all tasks...  []{}\nSED-ML version level not supported, import may fail\nSED-ML version level not supported, import may fail\nERROR (SBMLImporter:1362) - unexpected assignment rule target 'SpeciesContext@5df778c3(id=null, name='SLP76t', species='SLP76t', structure='Cell', sbmlName='SLP76t')', adding as assignment rule - minimal support provided []{}\nERROR (SBMLImporter:1363) - need to create a VCLogger event []{}\nERROR (SBMLImporter:1362) - unexpected assignment rule target 'SpeciesContext@3c5dbdf8(id=null, name='ZAP70t', species='ZAP70t', structure='Cell', sbmlName='ZAP70t')', adding as assignment rule - minimal support provided []{}\nERROR (SBMLImporter:1363) - need to create a VCLogger event []{}\nERROR (SBMLImporter:1362) - unexpected assignment rule target 'SpeciesContext@2849434b(id=null, name='CD28t', species='CD28t', structure='Cell', sbmlName='CD28t')', adding as assignment rule - minimal support provided []{}\nERROR (SBMLImporter:1363) - need to create a VCLogger event []{}\nERROR (SBMLImporter:1362) - unexpected assignment rule target 'SpeciesContext@767a014e(id=null, name='LCKactive', species='LCKactive', structure='Cell', sbmlName='LCKactive')', adding as assignment rule - minimal support provided []{}\nERROR (SBMLImporter:1363) - need to create a VCLogger event []{}\nERROR (SBMLImporter:1362) - unexpected assignment rule target 'SpeciesContext@a66e580(id=null, name='LATt', species='LATt', structure='Cell', sbmlName='LATt')', adding as assignment rule - minimal support provided []{}\nERROR (SBMLImporter:1363) - need to create a VCLogger event []{}\nERROR (SBMLImporter:1362) - unexpected assignment rule target 'SpeciesContext@6edcad64(id=null, name='LCKinactive', species='LCKinactive', structure='Cell', sbmlName='LCKinactive')', adding as assignment rule - minimal support provided []{}\nERROR (SBMLImporter:1363) - need to create a VCLogger event []{}\nERROR (SBMLImporter:1362) - unexpected assignment rule target 'SpeciesContext@43e9089(id=null, name='PI3Kt', species='PI3Kt', structure='Cell', sbmlName='PI3Kt')', adding as assignment rule - minimal support provided []{}\nERROR (SBMLImporter:1363) - need to create a VCLogger event []{}\nERROR (SBMLImporter:1362) - unexpected assignment rule target 'SpeciesContext@895416d(id=null, name='CD3t', species='CD3t', structure='Cell', sbmlName='CD3t')', adding as assignment rule - minimal support provided []{}\nERROR (SBMLImporter:1363) - need to create a VCLogger event []{}\nERROR (SBMLImporter:1362) - unexpected assignment rule target 'SpeciesContext@4eba373c(id=null, name='LCKt', species='LCKt', structure='Cell', sbmlName='LCKt')', adding as assignment rule - minimal support provided []{}\nERROR (SBMLImporter:1363) - need to create a VCLogger event []{}\nERROR (SBMLImporter:1362) - unexpected assignment rule target 'SpeciesContext@2f5ac102(id=null, name='GADSt', species='GADSt', structure='Cell', sbmlName='GADSt')', adding as assignment rule - minimal support provided []{}\nERROR (SBMLImporter:1363) - need to create a VCLogger event []{}\nERROR (SBMLImporter:1362) - unexpected assignment rule target 'SpeciesContext@70228253(id=null, name='CPactive', species='CPactive', structure='Cell', sbmlName='CPactive')', adding as assignment rule - minimal support provided []{}\nERROR (SBMLImporter:1363) - need to create a VCLogger event []{}\n INFO (SimulationContext:3289) - mathMapping: message = transforming the Rate Rules... []{}\nERROR (SEDMLImporter:187) - Task (id='task1)' is not compatible, no equivalent solver found in ontology for requested algorithm 'KISAO:0000694'; trying with deterministic default solver CombinedSundials []{}\nERROR (SEDMLImporter:1074) - Algorithm parameter with kisao id 'KISAO:0000571' not supported at this time, skipping. []{}\nERROR (SEDMLImporter:1074) - Algorithm parameter with kisao id 'KISAO:0000216' not supported at this time, skipping. []{}\nERROR (SEDMLImporter:1074) - Algorithm parameter with kisao id 'KISAO:0000415' not supported at this time, skipping. []{}\ntaskToSimulationMap: 1\ntaskToListOfSubTasksMap: 1\ntaskToVariableMap: 1\ntopTaskToBaseTask: 1\n INFO (SolverHandler:430) - Solver: cbit.vcell.solvers.CombinedSundialsSolver@46de118b []{}\n INFO (SolverHandler:431) - Status: Finished: SOLVER_FINISHED:completed []{}\n INFO (SolverHandler:477) - Succesful execution: Model 'archive_Theinmozhi_2018.sedml_model' Task 'task1'. []{}\n INFO (SolverHandler:489) - Running simulation task1_task1, 323 ms []{}\n-----------------------------------------------------------------------------------------------------\n INFO (SolverHandler:613) - Ran 1 simulation jobs for 1 biomodels. []{}\n INFO (SedmlJob:302) - Generating outputs...  []{}\n INFO (SedmlJob:357) - Generating CSV file...  []{}\n INFO (RunUtils:196) - Ignoring unsupported output `plot_6_task2` while CSV generation. []{}\n INFO (RunUtils:196) - Ignoring unsupported output `plot_7_task2` while CSV generation. []{}\n INFO (RunUtils:196) - Ignoring unsupported output `plot_8_task2` while CSV generation. []{}\n INFO (RunUtils:196) - Ignoring unsupported output `plot_9_task2` while CSV generation. []{}\n INFO (RunUtils:196) - Ignoring unsupported output `plot_10_task2` while CSV generation. []{}\n INFO (RunUtils:202) - Generating report `autogen_report_for_task2`. []{}\n INFO (RunUtils:381) - created csv file for report autogen_report_for_task2: /tmp/VCell_CLI_19387cf84a79511354615857351477/Theinmozhi_2018.sedml/autogen_report_for_task2.csv []{}\n INFO (RunUtils:202) - Generating report `__plot__plot_6_task2`. []{}\n INFO (RunUtils:381) - created csv file for report __plot__plot_6_task2: /tmp/VCell_CLI_19387cf84a79511354615857351477/Theinmozhi_2018.sedml/__plot__plot_6_task2.csv []{}\n INFO (RunUtils:202) - Generating report `__plot__plot_7_task2`. []{}\n INFO (RunUtils:381) - created csv file for report __plot__plot_7_task2: /tmp/VCell_CLI_19387cf84a79511354615857351477/Theinmozhi_2018.sedml/__plot__plot_7_task2.csv []{}\n INFO (RunUtils:202) - Generating report `__plot__plot_8_task2`. []{}\n INFO (RunUtils:381) - created csv file for report __plot__plot_8_task2: /tmp/VCell_CLI_19387cf84a79511354615857351477/Theinmozhi_2018.sedml/__plot__plot_8_task2.csv []{}\n INFO (RunUtils:202) - Generating report `__plot__plot_9_task2`. []{}\n INFO (RunUtils:381) - created csv file for report __plot__plot_9_task2: /tmp/VCell_CLI_19387cf84a79511354615857351477/Theinmozhi_2018.sedml/__plot__plot_9_task2.csv []{}\n INFO (RunUtils:202) - Generating report `__plot__plot_10_task2`. []{}\n INFO (RunUtils:381) - created csv file for report __plot__plot_10_task2: /tmp/VCell_CLI_19387cf84a79511354615857351477/Theinmozhi_2018.sedml/__plot__plot_10_task2.csv []{}\n INFO (SedmlJob:380) - Generating Plots...  []{}\n INFO (SedmlJob:391) - Generating HDF5 file...  []{}\n INFO (NonspatialResultsConverter:204) - Ignoring unsupported output `plot_6_task2` while CSV generation. []{}\n INFO (NonspatialResultsConverter:204) - Ignoring unsupported output `plot_7_task2` while CSV generation. []{}\n INFO (NonspatialResultsConverter:204) - Ignoring unsupported output `plot_8_task2` while CSV generation. []{}\n INFO (NonspatialResultsConverter:204) - Ignoring unsupported output `plot_9_task2` while CSV generation. []{}\n INFO (NonspatialResultsConverter:204) - Ignoring unsupported output `plot_10_task2` while CSV generation. []{}\n INFO (SedmlJob:343) - Archiving result files []{}\n INFO (RunUtils:450) - Archiving resultant PDF files to `plots.zip`. []{}\n INFO (RunUtils:450) - Archiving resultant CSV files to `reports.zip`. []{}\n INFO (SedmlJob:350) - SED-ML : Theinmozhi_2018.sedml successfully completed []{}\n INFO (ExecutionJob:144) - Processing of SedML succeeded.\n\t> 1 model\n\t> 1 simulation\n\t> 2 tasks\n\t> 6 outputs\n\t\t>> 1 report\n\t\t>> 5 2D plots\n\t\t>> 0 3D plots\n\t> Does not have Math Overrides\n\t> Does not have Parameter Scans []{}\n INFO (BiosimulationsHdf5Writer:39) - Creating hdf5 file `reports.h5` in/tmp/VCell_CLI_19387cf84a79511354615857351477 []{}\n WARN (WritableHdfFile:50) - Writing files is in alpha. Check files carefully! []{}\n INFO (BiosimulationsHdf5Writer:122) - HDF5 file successfully written to. []{}\n INFO (ExecutionJob:174) - Omex archive.omex processing completed (15s) []{}\n\n\u001b[0;36m===================================================== Saving log ====================================================\u001b[0m\nCompleted 11.4 KiB/11.4 KiB (133.4 KiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/rawLog.txt\n\n\u001b[0;36m===================================================== Saving Structured log ==========================================\u001b[0m\nCompleted 8.7 KiB/8.7 KiB (81.9 KiB/s) with 1 file(s) remaining\rupload: outputs/log.yml to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/outputs/log.yml\n\n\u001b[0;36m================================================== Zipping outputs ==================================================\u001b[0m\n  adding: outputs/ (stored 0%)\n  adding: outputs/log.yml (deflated 88%)\n  adding: outputs/reports.zip (stored 0%)\n  adding: outputs/log.json (deflated 95%)\n  adding: outputs/Theinmozhi_2018.sedml/ (stored 0%)\n  adding: outputs/Theinmozhi_2018.sedml/plot_9_task2.pdf (deflated 32%)\n  adding: outputs/Theinmozhi_2018.sedml/autogen_report_for_task2.csv (deflated 64%)\n  adding: outputs/Theinmozhi_2018.sedml/plot_10_task2.csv (deflated 51%)\n  adding: outputs/Theinmozhi_2018.sedml/plot_10_task2.pdf (deflated 32%)\n  adding: outputs/Theinmozhi_2018.sedml/plot_6_task2.pdf (deflated 32%)\n  adding: outputs/Theinmozhi_2018.sedml/plot_8_task2.csv (deflated 57%)\n  adding: outputs/Theinmozhi_2018.sedml/plot_7_task2.csv (deflated 54%)\n  adding: outputs/Theinmozhi_2018.sedml/plot_8_task2.pdf (deflated 30%)\n  adding: outputs/Theinmozhi_2018.sedml/plot_6_task2.csv (deflated 53%)\n  adding: outputs/Theinmozhi_2018.sedml/plot_7_task2.pdf (deflated 31%)\n  adding: outputs/Theinmozhi_2018.sedml/plot_9_task2.csv (deflated 50%)\n  adding: outputs/reports.h5 (deflated 55%)\n  adding: rawLog.txt (deflated 79%)\n\n\u001b[0;36m=================================================== Saving HDF5 outputs ==================================================\u001b[0m\nCompleted 117.0 KiB/117.0 KiB (1.1 MiB/s) with 1 file(s) remaining\rupload: outputs/reports.h5 to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/outputs/reports.h5\n\n\u001b[0;36m=================================================== Saving non-HDF5 outputs ==================================================\u001b[0m\nCompleted 9.5 KiB/623.3 KiB (71.0 KiB/s) with 16 file(s) remaining\rupload: outputs/Theinmozhi_2018.sedml/plot_10_task2.pdf to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/outputs/Theinmozhi_2018.sedml/plot_10_task2.pdf\nCompleted 9.5 KiB/623.3 KiB (71.0 KiB/s) with 15 file(s) remaining\rCompleted 13.8 KiB/623.3 KiB (93.2 KiB/s) with 15 file(s) remaining\rupload: outputs/Theinmozhi_2018.sedml/plot_8_task2.csv to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/outputs/Theinmozhi_2018.sedml/plot_8_task2.csv\nCompleted 13.8 KiB/623.3 KiB (93.2 KiB/s) with 14 file(s) remaining\rCompleted 16.4 KiB/623.3 KiB (106.6 KiB/s) with 14 file(s) remaining\rupload: outputs/Theinmozhi_2018.sedml/plot_9_task2.csv to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/outputs/Theinmozhi_2018.sedml/plot_9_task2.csv\nCompleted 16.4 KiB/623.3 KiB (106.6 KiB/s) with 13 file(s) remaining\rCompleted 30.7 KiB/623.3 KiB (195.9 KiB/s) with 13 file(s) remaining\rupload: outputs/Theinmozhi_2018.sedml/plot_8_task2.pdf to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/outputs/Theinmozhi_2018.sedml/plot_8_task2.pdf\nCompleted 30.7 KiB/623.3 KiB (195.9 KiB/s) with 12 file(s) remaining\rCompleted 54.2 KiB/623.3 KiB (310.4 KiB/s) with 12 file(s) remaining\rupload: outputs/log.json to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/outputs/log.json\nCompleted 54.2 KiB/623.3 KiB (310.4 KiB/s) with 11 file(s) remaining\rCompleted 63.6 KiB/623.3 KiB (339.6 KiB/s) with 11 file(s) remaining\rupload: outputs/Theinmozhi_2018.sedml/plot_9_task2.pdf to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/outputs/Theinmozhi_2018.sedml/plot_9_task2.pdf\nCompleted 63.6 KiB/623.3 KiB (339.6 KiB/s) with 10 file(s) remaining\rCompleted 230.0 KiB/623.3 KiB (1.1 MiB/s) with 10 file(s) remaining \rupload: outputs/Theinmozhi_2018.sedml/autogen_report_for_task2.csv to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/outputs/Theinmozhi_2018.sedml/autogen_report_for_task2.csv\nCompleted 230.0 KiB/623.3 KiB (1.1 MiB/s) with 9 file(s) remaining\rCompleted 242.8 KiB/623.3 KiB (1.0 MiB/s) with 9 file(s) remaining\rupload: outputs/Theinmozhi_2018.sedml/plot_7_task2.pdf to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/outputs/Theinmozhi_2018.sedml/plot_7_task2.pdf\nCompleted 242.8 KiB/623.3 KiB (1.0 MiB/s) with 8 file(s) remaining\rCompleted 245.3 KiB/623.3 KiB (1.0 MiB/s) with 8 file(s) remaining\rupload: outputs/Theinmozhi_2018.sedml/plot_10_task2.csv to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/outputs/Theinmozhi_2018.sedml/plot_10_task2.csv\nCompleted 245.3 KiB/623.3 KiB (1.0 MiB/s) with 7 file(s) remaining\rCompleted 258.8 KiB/623.3 KiB (1.0 MiB/s) with 7 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/rawLog.txt\nCompleted 258.8 KiB/623.3 KiB (1.0 MiB/s) with 6 file(s) remaining\rCompleted 261.3 KiB/623.3 KiB (1.0 MiB/s) with 6 file(s) remaining\rupload: outputs/Theinmozhi_2018.sedml/plot_6_task2.csv to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/outputs/Theinmozhi_2018.sedml/plot_6_task2.csv\nCompleted 261.3 KiB/623.3 KiB (1.0 MiB/s) with 5 file(s) remaining\rCompleted 329.6 KiB/623.3 KiB (1.2 MiB/s) with 5 file(s) remaining\rupload: outputs/reports.zip to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/outputs/reports.zip\nCompleted 329.6 KiB/623.3 KiB (1.2 MiB/s) with 4 file(s) remaining\rCompleted 566.8 KiB/623.3 KiB (2.1 MiB/s) with 4 file(s) remaining\rupload: ./output.zip to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/output.zip\nCompleted 566.8 KiB/623.3 KiB (2.1 MiB/s) with 3 file(s) remaining\rCompleted 579.5 KiB/623.3 KiB (2.1 MiB/s) with 3 file(s) remaining\rupload: outputs/Theinmozhi_2018.sedml/plot_6_task2.pdf to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/outputs/Theinmozhi_2018.sedml/plot_6_task2.pdf\nCompleted 579.5 KiB/623.3 KiB (2.1 MiB/s) with 2 file(s) remaining\rCompleted 620.8 KiB/623.3 KiB (1.5 MiB/s) with 2 file(s) remaining\rupload: outputs/plots.zip to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/outputs/plots.zip\nCompleted 620.8 KiB/623.3 KiB (1.5 MiB/s) with 1 file(s) remaining\rCompleted 623.3 KiB/623.3 KiB (1.3 MiB/s) with 1 file(s) remaining\rupload: outputs/Theinmozhi_2018.sedml/plot_7_task2.csv to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/outputs/Theinmozhi_2018.sedml/plot_7_task2.csv\n\n\u001b[0;36m====================================== Unzip contents of COMBINE/OMEX archive ======================================\u001b[0m\nArchive:  archive.omex\n  inflating: contents/manifest.xml   \n  inflating: contents/Theinmozhi_2018.sedml  \n  inflating: contents/Theinmozhi_2018.xml  \n\n\u001b[0;36m====================================== Save contents of COMBINE/OMEX archive ======================================\u001b[0m\nCompleted 185.5 KiB/252.4 KiB (1.7 MiB/s) with 3 file(s) remaining\rupload: contents/Theinmozhi_2018.xml to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/contents/Theinmozhi_2018.xml\nCompleted 185.5 KiB/252.4 KiB (1.7 MiB/s) with 2 file(s) remaining\rCompleted 186.1 KiB/252.4 KiB (1.7 MiB/s) with 2 file(s) remaining\rupload: contents/manifest.xml to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/contents/manifest.xml\nCompleted 186.1 KiB/252.4 KiB (1.7 MiB/s) with 1 file(s) remaining\rCompleted 252.4 KiB/252.4 KiB (1.6 MiB/s) with 1 file(s) remaining\rupload: contents/Theinmozhi_2018.sedml to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/contents/Theinmozhi_2018.sedml\n\n\u001b[0;36m==================================================== Updating log (2) ===============================================\u001b[0m\nCompleted 19.2 KiB/19.2 KiB (62.3 KiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/674dc674261553b9bc253ed9/rawLog.txt\n\n\u001b[0;36m================================================== Saving final log =================================================\u001b[0m\n\n\u001b[0;36m=========================================== Post-processing simulation run ==========================================\u001b[0m\n\u001b[0;32mProcess the manifest file in the COMBINE archive ... succeeded.\nRead the manifest and post the files to the API ... succeeded.\nCreate thumbnails from the images specified in the manifest ... succeeded.\nPost thumbnails to the API ... succeeded.\nProcess and upload the outputs of the simulation run ... succeeded.\nProcess the SED-ML file in the COMBINE archive ... succeeded.\nRetrieve the logs of the simulation run ... succeeded.\nPost the logs to the API ... succeeded.\u001b[0m\n\u001b[1;33mProcess the metadata in the COMBINE archive ... failed due to: The metadata of the file could not be found:\nThere was an error in processing the metadata file. More information is available at https://docs.biosimulations.org/concepts/conventions/simulation-project-metadata/. A validation tool is available at https://run.biosimulations.org/utils/validate-metadata.\nPost the metadata to the API ... failed due to: Metadata not found due to a dependent step failing.\u001b[0m\n\u001b[0;31mPost the SED-ML file to the API ... failed due to: Failed to post SED-ML specs:\nThere was an error uploading the SED-ML specifications to the API.\u001b[0m\n\u001b[0;36m================================ Run complete. Thank you for using runBioSimulations! ===============================\u001b[0m","duration":15,"sedDocuments":[{"location":"Theinmozhi_2018.sedml","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"Initializing SED-ML document... done. Successful translation of SED-ML file. Building solvers and starting simulation of all tasks... Generating outputs... Generating CSV file... Done. Generating HDF5 file...","duration":null,"tasks":[{"id":"task1","status":"SUCCEEDED","exception":null,"skipReason":null,"output":null,"duration":1,"algorithm":"KISAO_0000019","simulatorDetails":null},{"id":"task2","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"Initializing simulation job 0 ... done. Starting simulation... 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