{"status":"SUCCEEDED","exception":null,"skipReason":null,"output":"\u001b[0;36mThank you for using runBioSimulations!\u001b[0m\n\n\u001b[0;36m================================================ Loading Singularity ================================================\u001b[0m\n\n\u001b[0;36m=================================================== Set up storage ==================================================\u001b[0m\n\n\u001b[0;36m========================================== Downloading COMBINE/OMEX archive =========================================\u001b[0m\n  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current\n                                 Dload  Upload   Total   Spent    Left  Speed\n\r  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0\r100   139  100   139    0     0    445      0 --:--:-- --:--:-- --:--:--   446\n\r100 71861  100 71861    0     0   167k      0 --:--:-- --:--:-- --:--:--  167k\n\n\u001b[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================\u001b[0m\nINFO:    Using cached SIF image\n \u001b[34msucceeded\u001b[0m\n\n  Executed 1 tasks and 2 outputs:\n    Tasks:\n      Succeeded: 1\n      Skipped: 0\n      Failed: 0\n    Outputs:\n      Succeeded: 2\n      Skipped: 0\n      Failed: 0\n\nBundling outputs ...\nCleaning up ...\n\n============= SUMMARY =============\nExecuted 2 SED documents:\n  SED documents (2):\n    Succeeded: 2\n    Skipped: 0\n    Failed: 0\n  Tasks (2):\n    Succeeded: 2\n    Skipped: 0\n    Failed: 0\n  Outputs (4):\n    Succeeded: 4\n    Skipped: 0\n    Failed: 0\n\n\n\u001b[0;36m===================================================== Saving log ====================================================\u001b[0m\nCompleted 1.6 KiB/1.6 KiB (24.2 KiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/rawLog.txt\nCompleted 7.4 KiB/7.4 KiB (113.6 KiB/s) with 1 file(s) remaining\rupload: outputs/log.yml to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/outputs/log.yml\n\n\u001b[0;36m================================================== Zipping outputs ==================================================\u001b[0m\n  adding: outputs/ (stored 0%)\n  adding: outputs/log.yml (deflated 87%)\n  adding: outputs/4C_Reactions.sedml/ (stored 0%)\n  adding: outputs/4C_Reactions.sedml/plot_1_task1.pdf (deflated 29%)\n  adding: outputs/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/ (stored 0%)\n  adding: outputs/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/plot_1_task1.pdf (deflated 29%)\n  adding: outputs/reports.h5 (deflated 14%)\n  adding: rawLog.txt (deflated 70%)\n\n\u001b[0;36m=================================================== Saving outputs ==================================================\u001b[0m\nCompleted 256.0 KiB/359.8 KiB (5.9 MiB/s) with 1 file(s) remaining\rCompleted 359.8 KiB/359.8 KiB (3.1 MiB/s) with 1 file(s) remaining\rupload: outputs/reports.h5 to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/outputs/reports.h5\nCompleted 256.0 KiB/370.4 KiB (6.5 MiB/s) with 5 file(s) remaining\rCompleted 328.1 KiB/370.4 KiB (3.1 MiB/s) with 5 file(s) remaining\rupload: ./output.zip to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/output.zip\nCompleted 328.1 KiB/370.4 KiB (3.1 MiB/s) with 4 file(s) remaining\rCompleted 339.8 KiB/370.4 KiB (3.1 MiB/s) with 4 file(s) remaining\rupload: outputs/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/plot_1_task1.pdf to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/outputs/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/plot_1_task1.pdf\nCompleted 339.8 KiB/370.4 KiB (3.1 MiB/s) with 3 file(s) remaining\rCompleted 351.4 KiB/370.4 KiB (2.9 MiB/s) with 3 file(s) remaining\rupload: outputs/4C_Reactions.sedml/plot_1_task1.pdf to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/outputs/4C_Reactions.sedml/plot_1_task1.pdf\nCompleted 351.4 KiB/370.4 KiB (2.9 MiB/s) with 2 file(s) remaining\rCompleted 367.5 KiB/370.4 KiB (2.8 MiB/s) with 2 file(s) remaining\rupload: outputs/plots.zip to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/outputs/plots.zip\nCompleted 367.5 KiB/370.4 KiB (2.8 MiB/s) with 1 file(s) remaining\rCompleted 370.4 KiB/370.4 KiB (2.8 MiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/rawLog.txt\n\n\u001b[0;36m====================================== Saving contents of COMBINE/OMEX archive ======================================\u001b[0m\nArchive:  archive.omex\n  inflating: contents/4C_Reactions.cps  \n  inflating: contents/4C_Reactions.sedml  \n  inflating: contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect-biopax2.owl  \n  inflating: contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect-biopax3.owl  \n  inflating: contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect-matlab.m  \n  inflating: contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect-octave.m  \n  inflating: contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.cps  \n  inflating: contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.ode  \n  inflating: contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml  \n  inflating: contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.xml  \n  inflating: contents/curation_image.png  \n  inflating: contents/curation_notes.txt  \n  inflating: contents/metadata.rdf   \n  inflating: contents/manifest.xml   \nCompleted 17.8 KiB/308.8 KiB (242.1 KiB/s) with 14 file(s) remaining\rupload: contents/4C_Reactions.sedml to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/contents/4C_Reactions.sedml\nCompleted 17.8 KiB/308.8 KiB (242.1 KiB/s) with 13 file(s) remaining\rCompleted 37.1 KiB/308.8 KiB (271.8 KiB/s) with 13 file(s) remaining\rupload: contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect-biopax3.owl to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect-biopax3.owl\nCompleted 37.1 KiB/308.8 KiB (271.8 KiB/s) with 12 file(s) remaining\rCompleted 99.9 KiB/308.8 KiB (698.4 KiB/s) with 12 file(s) remaining\rupload: contents/4C_Reactions.cps to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/contents/4C_Reactions.cps\nCompleted 99.9 KiB/308.8 KiB (698.4 KiB/s) with 11 file(s) remaining\rCompleted 175.0 KiB/308.8 KiB (1.2 MiB/s) with 11 file(s) remaining \rupload: contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.cps to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.cps\nCompleted 175.0 KiB/308.8 KiB (1.2 MiB/s) with 10 file(s) remaining\rCompleted 193.0 KiB/308.8 KiB (1.3 MiB/s) with 10 file(s) remaining\rupload: contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml\nCompleted 193.0 KiB/308.8 KiB (1.3 MiB/s) with 9 file(s) remaining\rCompleted 234.0 KiB/308.8 KiB (1.5 MiB/s) with 9 file(s) remaining\rupload: contents/curation_image.png to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/contents/curation_image.png\nCompleted 234.0 KiB/308.8 KiB (1.5 MiB/s) with 8 file(s) remaining\rCompleted 276.8 KiB/308.8 KiB (1.7 MiB/s) with 8 file(s) remaining\rupload: contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.xml to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.xml\nCompleted 276.8 KiB/308.8 KiB (1.7 MiB/s) with 7 file(s) remaining\rCompleted 278.8 KiB/308.8 KiB (1.6 MiB/s) with 7 file(s) remaining\rupload: contents/manifest.xml to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/contents/manifest.xml\nCompleted 278.8 KiB/308.8 KiB (1.6 MiB/s) with 6 file(s) remaining\rCompleted 280.1 KiB/308.8 KiB (1.6 MiB/s) with 6 file(s) remaining\rupload: contents/metadata.rdf to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/contents/metadata.rdf\nCompleted 280.1 KiB/308.8 KiB (1.6 MiB/s) with 5 file(s) remaining\rCompleted 280.6 KiB/308.8 KiB (1.5 MiB/s) with 5 file(s) remaining\rupload: contents/curation_notes.txt to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/contents/curation_notes.txt\nCompleted 280.6 KiB/308.8 KiB (1.5 MiB/s) with 4 file(s) remaining\rCompleted 286.4 KiB/308.8 KiB (1.3 MiB/s) with 4 file(s) remaining\rupload: contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect-octave.m to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect-octave.m\nCompleted 286.4 KiB/308.8 KiB (1.3 MiB/s) with 3 file(s) remaining\rCompleted 299.0 KiB/308.8 KiB (1.4 MiB/s) with 3 file(s) remaining\rupload: contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect-biopax2.owl to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect-biopax2.owl\nCompleted 299.0 KiB/308.8 KiB (1.4 MiB/s) with 2 file(s) remaining\rCompleted 304.8 KiB/308.8 KiB (1.4 MiB/s) with 2 file(s) remaining\rupload: contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect-matlab.m to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect-matlab.m\nCompleted 304.8 KiB/308.8 KiB (1.4 MiB/s) with 1 file(s) remaining\rCompleted 308.8 KiB/308.8 KiB (1.3 MiB/s) with 1 file(s) remaining\rupload: contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.ode to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/contents/Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.ode\n\n\u001b[0;36m==================================================== Updating log ===================================================\u001b[0m\nCompleted 9.9 KiB/9.9 KiB (146.0 KiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/6488f168da4ff2037f59c03c/rawLog.txt\n\n\u001b[0;36m=================================================== Saving results ==================================================\u001b[0m\ncreating group /4C_Reactions.sedml\ncreating dataset /4C_Reactions.sedml/autogen_report_for_task1, shape: (31, 1001), type: float64\ndataset created, uuid: d-8f22aa87-28d2197e-df55-1e3064-26c4c6, chunk_size: (31, 1001)\ncreating dataset /4C_Reactions.sedml/plot_1_task1, shape: (6, 1001), type: float64\ndataset created, uuid: d-8f22aa87-28d2197e-fe2e-1c8dda-78ebcd, chunk_size: (6, 1001)\ncreating group /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml\ncreating dataset /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/autogen_report_for_task1, shape: (31, 1001), type: float64\ndataset created, uuid: d-8f22aa87-28d2197e-88e3-20dbbc-5bb4fd, chunk_size: (31, 1001)\ncreating dataset /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/plot_1_task1, shape: (6, 1001), type: float64\ndataset created, uuid: d-8f22aa87-28d2197e-d4ea-40e285-cce2f0, chunk_size: (6, 1001)\ncreating attribute combineArchiveLocation in /4C_Reactions.sedml\ncreating attribute uri in /4C_Reactions.sedml\ncreating attribute _type in /4C_Reactions.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetDataTypes in /4C_Reactions.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetIds in /4C_Reactions.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetLabels in /4C_Reactions.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetNames in /4C_Reactions.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetShapes in /4C_Reactions.sedml/autogen_report_for_task1\ncreating attribute sedmlId in /4C_Reactions.sedml/autogen_report_for_task1\ncreating attribute sedmlName in /4C_Reactions.sedml/autogen_report_for_task1\ncreating attribute uri in /4C_Reactions.sedml/autogen_report_for_task1\ncreating attribute _type in /4C_Reactions.sedml/plot_1_task1\ncreating attribute sedmlDataSetDataTypes in /4C_Reactions.sedml/plot_1_task1\ncreating attribute sedmlDataSetIds in /4C_Reactions.sedml/plot_1_task1\ncreating attribute sedmlDataSetLabels in /4C_Reactions.sedml/plot_1_task1\ncreating attribute sedmlDataSetNames in /4C_Reactions.sedml/plot_1_task1\ncreating attribute sedmlDataSetShapes in /4C_Reactions.sedml/plot_1_task1\ncreating attribute sedmlId in /4C_Reactions.sedml/plot_1_task1\ncreating attribute sedmlName in /4C_Reactions.sedml/plot_1_task1\ncreating attribute uri in /4C_Reactions.sedml/plot_1_task1\ncreating attribute combineArchiveLocation in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml\ncreating attribute uri in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml\ncreating attribute _type in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetDataTypes in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetIds in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetLabels in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetNames in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetShapes in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/autogen_report_for_task1\ncreating attribute sedmlId in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/autogen_report_for_task1\ncreating attribute sedmlName in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/autogen_report_for_task1\ncreating attribute uri in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/autogen_report_for_task1\ncreating attribute _type in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/plot_1_task1\ncreating attribute sedmlDataSetDataTypes in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/plot_1_task1\ncreating attribute sedmlDataSetIds in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/plot_1_task1\ncreating attribute sedmlDataSetLabels in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/plot_1_task1\ncreating attribute sedmlDataSetNames in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/plot_1_task1\ncreating attribute sedmlDataSetShapes in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/plot_1_task1\ncreating attribute sedmlId in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/plot_1_task1\ncreating attribute sedmlName in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/plot_1_task1\ncreating attribute uri in /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/plot_1_task1\ncreate_links: /\ngot link: 4C_Reactions.sedml\ngot link: Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml\ncreate_links: /4C_Reactions.sedml\ngot link: autogen_report_for_task1\ngot link: plot_1_task1\ncreate_links: /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml\ngot link: autogen_report_for_task1\ngot link: plot_1_task1\nwrite_dataset src: /4C_Reactions.sedml/autogen_report_for_task1 to tgt: /4C_Reactions.sedml/autogen_report_for_task1, shape: (31, 1001), type: float64\niterating over chunks for /4C_Reactions.sedml/autogen_report_for_task1\nwriting dataset data for slice: (slice(0, 31, 1), slice(0, 1001, 1))\ndone with dataload for /4C_Reactions.sedml/autogen_report_for_task1\nwrite_dataset src: /4C_Reactions.sedml/plot_1_task1 to tgt: /4C_Reactions.sedml/plot_1_task1, shape: (6, 1001), type: float64\niterating over chunks for /4C_Reactions.sedml/plot_1_task1\nwriting dataset data for slice: (slice(0, 6, 1), slice(0, 1001, 1))\ndone with dataload for /4C_Reactions.sedml/plot_1_task1\nwrite_dataset src: /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/autogen_report_for_task1 to tgt: /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/autogen_report_for_task1, shape: (31, 1001), type: float64\niterating over chunks for /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/autogen_report_for_task1\nwriting dataset data for slice: (slice(0, 31, 1), slice(0, 1001, 1))\ndone with dataload for /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/autogen_report_for_task1\nwrite_dataset src: /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/plot_1_task1 to tgt: /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/plot_1_task1, shape: (6, 1001), type: float64\niterating over chunks for /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/plot_1_task1\nwriting dataset data for slice: (slice(0, 6, 1), slice(0, 1001, 1))\ndone with dataload for /Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml/plot_1_task1\nload_file complete\nFile outputs/reports.h5 uploaded to domain: /results/6488f168da4ff2037f59c03c\n\n\u001b[0;36m================================================== Saving final log =================================================\u001b[0m\n\n\u001b[0;36m=========================================== Post-processing simulation run ==========================================\u001b[0m\n\u001b[0;32mRetrieve the logs of the simulation run ... succeeded.\nPost the logs to the API ... succeeded.\nProcess and upload the outputs of the simulation run ... succeeded.\nProcess the metadata in the COMBINE archive ... succeeded.\nPost the metadata to the API ... succeeded.\nProcess the SED-ML file in the COMBINE archive ... succeeded.\nPost the SED-ML file to the API ... succeeded.\nProcess the manifest file in the COMBINE archive ... succeeded.\nRead the manifest and post the files to the API ... succeeded.\nCreate thumbnails from the images specified in the manifest ... succeeded.\nPost thumbnails to the API ... succeeded.\u001b[0m\n\u001b[0;36m================================ Run complete. Thank you for using runBioSimulations! ===============================\u001b[0m","duration":2.241888,"sedDocuments":[{"location":"4C_Reactions.sedml","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"Archive contains 2 SED-ML documents with 2 models, 2 simulations, 2 tasks, 2 reports, and 2 plots:\r\n  4C_Reactions.sedml:\r\n    Tasks (1):\r\n      task1\r\n    Reports (1):\r\n      autogen_report_for_task1: 31 data sets\r\n    Plots (1):\r\n      plot_1_task1: 5 curves\r\n  Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml:\r\n    Tasks (1):\r\n      task1\r\n    Reports (1):\r\n      autogen_report_for_task1: 31 data sets\r\n    Plots (1):\r\n      plot_1_task1: 5 curves\r\n\r\nExecuting SED-ML file 1: 4C_Reactions.sedml ...\r\n  Found 1 tasks and 2 outputs:\r\n    Tasks:\r\n      `task1`\r\n    Outputs:\r\n      `autogen_report_for_task1`\r\n      `plot_1_task1`\r\n  Executing task 1: `task1`\r\n    Executing simulation ... \u001b[34msucceeded\u001b[0m\r\n    Generating 2 outputs ...\r\n      Generating output 1: `plot_1_task1` ... \u001b[34msucceeded\u001b[0m\r\n      Generating output 2: `autogen_report_for_task1` ...","duration":0.973644,"tasks":[{"id":"task1","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.137048,"algorithm":"KISAO_0000560","simulatorDetails":[{"key":"methodName","value":"deterministic"},{"key":"methodCode","value":22},{"key":"parameters","value":{"Absolute Tolerance":1e-12,"Integrate Reduced Model":false,"Max Internal Steps":10000,"Relative Tolerance":0.000001}}]}],"outputs":[{"id":"plot_1_task1","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.412619,"curves":[{"id":"p1_curve_1_task1","status":"SUCCEEDED"},{"id":"p1_curve_2_task1","status":"SUCCEEDED"},{"id":"p1_curve_3_task1","status":"SUCCEEDED"},{"id":"p1_curve_4_task1","status":"SUCCEEDED"},{"id":"p1_curve_5_task1","status":"SUCCEEDED"}]},{"id":"autogen_report_for_task1","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.259105,"dataSets":[{"id":"autogen_time_for_task1","status":"SUCCEEDED"},{"id":"autogen_task1_S_a","status":"SUCCEEDED"},{"id":"autogen_task1_I_a","status":"SUCCEEDED"},{"id":"autogen_task1_S_h","status":"SUCCEEDED"},{"id":"autogen_task1_I_h","status":"SUCCEEDED"},{"id":"autogen_task1_R_h","status":"SUCCEEDED"},{"id":"autogen_task1_r_a","status":"SUCCEEDED"},{"id":"autogen_task1_K_a","status":"SUCCEEDED"},{"id":"autogen_task1_beta_a","status":"SUCCEEDED"},{"id":"autogen_task1_mu_a","status":"SUCCEEDED"},{"id":"autogen_task1_delta_a","status":"SUCCEEDED"},{"id":"autogen_task1_pi_h","status":"SUCCEEDED"},{"id":"autogen_task1_beta_h","status":"SUCCEEDED"},{"id":"autogen_task1_mu_h","status":"SUCCEEDED"},{"id":"autogen_task1_gamma","status":"SUCCEEDED"},{"id":"autogen_task1_delta_h","status":"SUCCEEDED"},{"id":"autogen_task1_M_a","status":"SUCCEEDED"},{"id":"autogen_task1_m_a","status":"SUCCEEDED"},{"id":"autogen_task1_compartment","status":"SUCCEEDED"},{"id":"autogen_task1_Avian_population","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_1","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_2","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_3","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_4","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_5","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_6","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_7","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_8","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_9","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_10","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_11","status":"SUCCEEDED"}]}]},{"location":"Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml","status":"SUCCEEDED","exception":null,"skipReason":null,"output":" \u001b[34msucceeded\u001b[0m\r\n\r\n  Executed 1 tasks and 2 outputs:\r\n    Tasks:\r\n      Succeeded: 1\r\n      Skipped: 0\r\n      Failed: 0\r\n    Outputs:\r\n      Succeeded: 2\r\n      Skipped: 0\r\n      Failed: 0\r\nExecuting SED-ML file 2: Liu2017 - Dynamics of Avian Influenza with Allee Growth Effect.sedml ...\r\n  Found 1 tasks and 2 outputs:\r\n    Tasks:\r\n      `task1`\r\n    Outputs:\r\n      `autogen_report_for_task1`\r\n      `plot_1_task1`\r\n  Executing task 1: `task1`\r\n    Executing simulation ... \u001b[34msucceeded\u001b[0m\r\n    Generating 2 outputs ...\r\n      Generating output 1: `plot_1_task1` ... \u001b[34msucceeded\u001b[0m\r\n      Generating output 2: `autogen_report_for_task1` ...","duration":0.749714,"tasks":[{"id":"task1","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.093382,"algorithm":"KISAO_0000560","simulatorDetails":[{"key":"methodName","value":"deterministic"},{"key":"methodCode","value":22},{"key":"parameters","value":{"Absolute Tolerance":1e-12,"Integrate Reduced Model":false,"Max Internal Steps":10000,"Relative Tolerance":0.000001}}]}],"outputs":[{"id":"plot_1_task1","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.226946,"curves":[{"id":"p1_curve_1_task1","status":"SUCCEEDED"},{"id":"p1_curve_2_task1","status":"SUCCEEDED"},{"id":"p1_curve_3_task1","status":"SUCCEEDED"},{"id":"p1_curve_4_task1","status":"SUCCEEDED"},{"id":"p1_curve_5_task1","status":"SUCCEEDED"}]},{"id":"autogen_report_for_task1","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.265405,"dataSets":[{"id":"autogen_time_for_task1","status":"SUCCEEDED"},{"id":"autogen_task1_S_a","status":"SUCCEEDED"},{"id":"autogen_task1_I_a","status":"SUCCEEDED"},{"id":"autogen_task1_S_h","status":"SUCCEEDED"},{"id":"autogen_task1_I_h","status":"SUCCEEDED"},{"id":"autogen_task1_R_h","status":"SUCCEEDED"},{"id":"autogen_task1_r_a","status":"SUCCEEDED"},{"id":"autogen_task1_K_a","status":"SUCCEEDED"},{"id":"autogen_task1_beta_a","status":"SUCCEEDED"},{"id":"autogen_task1_mu_a","status":"SUCCEEDED"},{"id":"autogen_task1_delta_a","status":"SUCCEEDED"},{"id":"autogen_task1_pi_h","status":"SUCCEEDED"},{"id":"autogen_task1_beta_h","status":"SUCCEEDED"},{"id":"autogen_task1_mu_h","status":"SUCCEEDED"},{"id":"autogen_task1_gamma","status":"SUCCEEDED"},{"id":"autogen_task1_delta_h","status":"SUCCEEDED"},{"id":"autogen_task1_M_a","status":"SUCCEEDED"},{"id":"autogen_task1_m_a","status":"SUCCEEDED"},{"id":"autogen_task1_compartment","status":"SUCCEEDED"},{"id":"autogen_task1_Avian_population","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_1","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_2","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_3","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_4","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_5","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_6","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_7","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_8","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_9","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_10","status":"SUCCEEDED"},{"id":"autogen_task1_reaction_11","status":"SUCCEEDED"}]}]}]}