{"status":"SUCCEEDED","exception":null,"skipReason":null,"output":"\u001b[0;36mThank you for using runBioSimulations!\u001b[0m\n\n\u001b[0;36m================================================ Loading Singularity ================================================\u001b[0m\n\n\u001b[0;36m=================================================== Set up storage ==================================================\u001b[0m\n\n\u001b[0;36m========================================== Downloading COMBINE/OMEX archive =========================================\u001b[0m\n  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current\n                                 Dload  Upload   Total   Spent    Left  Speed\n\r  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0\r  0     0    0     0    0     0      0      0 --:--:--  0:00:01 --:--:--     0\r100   139  100   139    0     0     72      0  0:00:01  0:00:01 --:--:--    72\r100   139  100   139    0     0     72      0  0:00:01  0:00:01 --:--:--    72\n\r100 1080k  100 1080k    0     0   521k      0  0:00:02  0:00:02 --:--:--  521k\n\n\u001b[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================\u001b[0m\nINFO:    Using cached SIF image\nCould not find GLIMDA.\nlibtk8.6.so: cannot open shared object file: No such file or directory\r\n\r\nPySCeS defaults to matplotlib's TKagg backend if not specified                          in the user configuration file, set \"matplotlib_backend = <backend>\" \r\nMatplotlib interface loaded (pysces.plt.m)\r\nPitcon routines available\r\nNLEQ2 routines available\r\nSBML support available\r\nYou are using NumPy (1.21.4) with SciPy (1.7.3)\r\nAssimulo CVode available\r\nRateChar is available\r\nParallel scanner is available\r\n\r\nPySCeS environment\r\n******************\r\npysces.model_dir = /home/FCAM/crbmapi/Pysces/psc\r\npysces.output_dir = /home/FCAM/crbmapi/Pysces\r\n\r\n\r\n***********************************************************************\r\n* Welcome to PySCeS (1.0.0) - Python Simulator for Cellular Systems   *\r\n*                http://pysces.sourceforge.net                        *\r\n* Copyright(C) B.G. Olivier, J.M. Rohwer, J.-H.S. Hofmeyr, 2004-2022  *\r\n* Triple-J Group for Molecular Cell Physiology                        *\r\n* Stellenbosch University, ZA and VU University Amsterdam, NL         *\r\n* PySCeS is distributed under the PySCeS (BSD style) licence, see     *\r\n* LICENCE.txt (supplied with this release) for details                *\r\n* Please cite PySCeS with: doi:10.1093/bioinformatics/bti046          *\r\n***********************************************************************\r\n \u001b[34msucceeded\u001b[0m\n\n  Executed 1 tasks and 2 outputs:\n    Tasks:\n      Succeeded: 1\n      Skipped: 0\n      Failed: 0\n    Outputs:\n      Succeeded: 2\n      Skipped: 0\n      Failed: 0\n\nBundling outputs ...\nCleaning up ...\n\n============= SUMMARY =============\nExecuted 1 SED documents:\n  SED documents (1):\n    Succeeded: 1\n    Skipped: 0\n    Failed: 0\n  Tasks (1):\n    Succeeded: 1\n    Skipped: 0\n    Failed: 0\n  Outputs (2):\n    Succeeded: 2\n    Skipped: 0\n    Failed: 0\n\n\n\u001b[0;36m===================================================== Saving log ====================================================\u001b[0m\nCompleted 3.1 KiB/3.1 KiB (52.1 KiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/rawLog.txt\nCompleted 11.2 KiB/11.2 KiB (150.0 KiB/s) with 1 file(s) remaining\rupload: outputs/log.yml to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/outputs/log.yml\n\n\u001b[0;36m================================================== Zipping outputs ==================================================\u001b[0m\n  adding: outputs/ (stored 0%)\n  adding: outputs/log.yml (deflated 81%)\n  adding: outputs/BIOMD0000000513_url.sedml/ (stored 0%)\n  adding: outputs/BIOMD0000000513_url.sedml/autogen_plot_for_task1.pdf (deflated 23%)\n  adding: outputs/reports.h5 (deflated 6%)\n  adding: rawLog.txt (deflated 65%)\n\n\u001b[0;36m=================================================== Saving outputs ==================================================\u001b[0m\nCompleted 256.0 KiB/485.5 KiB (5.6 MiB/s) with 1 file(s) remaining\rCompleted 485.5 KiB/485.5 KiB (3.6 MiB/s) with 1 file(s) remaining\rupload: outputs/reports.h5 to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/outputs/reports.h5\nCompleted 22.6 KiB/532.4 KiB (310.8 KiB/s) with 5 file(s) remaining\rupload: ./_pystmptmpznoqdndv_parsetab.py to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/_pystmptmpznoqdndv_parsetab.py\nCompleted 22.6 KiB/532.4 KiB (310.8 KiB/s) with 4 file(s) remaining\rCompleted 278.6 KiB/532.4 KiB (3.2 MiB/s) with 4 file(s) remaining \rCompleted 296.8 KiB/532.4 KiB (2.4 MiB/s) with 4 file(s) remaining \rupload: outputs/BIOMD0000000513_url.sedml/autogen_plot_for_task1.pdf to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/outputs/BIOMD0000000513_url.sedml/autogen_plot_for_task1.pdf\nCompleted 296.8 KiB/532.4 KiB (2.4 MiB/s) with 3 file(s) remaining\rCompleted 310.5 KiB/532.4 KiB (2.4 MiB/s) with 3 file(s) remaining\rupload: outputs/plots.zip to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/outputs/plots.zip\nCompleted 310.5 KiB/532.4 KiB (2.4 MiB/s) with 2 file(s) remaining\rCompleted 314.7 KiB/532.4 KiB (2.4 MiB/s) with 2 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/rawLog.txt\nCompleted 314.7 KiB/532.4 KiB (2.4 MiB/s) with 1 file(s) remaining\rCompleted 532.4 KiB/532.4 KiB (3.5 MiB/s) with 1 file(s) remaining\rupload: ./output.zip to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/output.zip\n\n\u001b[0;36m====================================== Saving contents of COMBINE/OMEX archive ======================================\u001b[0m\nArchive:  archive.omex\n  inflating: contents/BIOMD0000000513-biopax2.owl  \n  inflating: contents/BIOMD0000000513-biopax3.owl  \n  inflating: contents/BIOMD0000000513-matlab.m  \n  inflating: contents/BIOMD0000000513-octave.m  \n  inflating: contents/BIOMD0000000513.m  \n  inflating: contents/BIOMD0000000513.ode  \n  inflating: contents/BIOMD0000000513.pdf  \n  inflating: contents/BIOMD0000000513.png  \n  inflating: contents/BIOMD0000000513.svg  \n  inflating: contents/BIOMD0000000513_url.sedml  \n  inflating: contents/BIOMD0000000513_url.xml  \n  inflating: contents/curation_image.png  \n  inflating: contents/curation_notes.txt  \n  inflating: contents/metadata.rdf   \n  inflating: contents/manifest.xml   \nCompleted 75.4 KiB/1.7 MiB (838.3 KiB/s) with 15 file(s) remaining\rupload: contents/BIOMD0000000513-biopax3.owl to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/contents/BIOMD0000000513-biopax3.owl\nCompleted 75.4 KiB/1.7 MiB (838.3 KiB/s) with 14 file(s) remaining\rCompleted 96.7 KiB/1.7 MiB (705.5 KiB/s) with 14 file(s) remaining\rupload: contents/BIOMD0000000513-octave.m to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/contents/BIOMD0000000513-octave.m\nCompleted 96.7 KiB/1.7 MiB (705.5 KiB/s) with 13 file(s) remaining\rCompleted 146.7 KiB/1.7 MiB (1.0 MiB/s) with 13 file(s) remaining \rupload: contents/BIOMD0000000513-biopax2.owl to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/contents/BIOMD0000000513-biopax2.owl\nCompleted 146.7 KiB/1.7 MiB (1.0 MiB/s) with 12 file(s) remaining\rCompleted 168.0 KiB/1.7 MiB (1.2 MiB/s) with 12 file(s) remaining\rupload: contents/BIOMD0000000513-matlab.m to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/contents/BIOMD0000000513-matlab.m\nCompleted 168.0 KiB/1.7 MiB (1.2 MiB/s) with 11 file(s) remaining\rCompleted 201.5 KiB/1.7 MiB (1.3 MiB/s) with 11 file(s) remaining\rupload: contents/BIOMD0000000513_url.sedml to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/contents/BIOMD0000000513_url.sedml\nCompleted 201.5 KiB/1.7 MiB (1.3 MiB/s) with 10 file(s) remaining\rCompleted 301.4 KiB/1.7 MiB (1.9 MiB/s) with 10 file(s) remaining\rupload: contents/BIOMD0000000513.svg to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/contents/BIOMD0000000513.svg\nCompleted 301.4 KiB/1.7 MiB (1.9 MiB/s) with 9 file(s) remaining\rCompleted 308.5 KiB/1.7 MiB (1.9 MiB/s) with 9 file(s) remaining\rupload: contents/metadata.rdf to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/contents/metadata.rdf\nCompleted 308.5 KiB/1.7 MiB (1.9 MiB/s) with 8 file(s) remaining\rCompleted 409.6 KiB/1.7 MiB (2.4 MiB/s) with 8 file(s) remaining\rupload: contents/BIOMD0000000513_url.xml to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/contents/BIOMD0000000513_url.xml\nCompleted 409.6 KiB/1.7 MiB (2.4 MiB/s) with 7 file(s) remaining\rCompleted 665.6 KiB/1.7 MiB (3.7 MiB/s) with 7 file(s) remaining\rCompleted 921.6 KiB/1.7 MiB (5.0 MiB/s) with 7 file(s) remaining\rCompleted 1.2 MiB/1.7 MiB (6.2 MiB/s) with 7 file(s) remaining  \rCompleted 1.2 MiB/1.7 MiB (6.0 MiB/s) with 7 file(s) remaining  \rupload: contents/curation_image.png to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/contents/curation_image.png\nCompleted 1.2 MiB/1.7 MiB (6.0 MiB/s) with 6 file(s) remaining\rCompleted 1.4 MiB/1.7 MiB (7.2 MiB/s) with 6 file(s) remaining\rCompleted 1.4 MiB/1.7 MiB (6.8 MiB/s) with 6 file(s) remaining\rupload: contents/manifest.xml to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/contents/manifest.xml\nCompleted 1.4 MiB/1.7 MiB (6.8 MiB/s) with 5 file(s) remaining\rCompleted 1.4 MiB/1.7 MiB (6.7 MiB/s) with 5 file(s) remaining\rupload: contents/BIOMD0000000513.m to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/contents/BIOMD0000000513.m\nCompleted 1.4 MiB/1.7 MiB (6.7 MiB/s) with 4 file(s) remaining\rCompleted 1.4 MiB/1.7 MiB (6.7 MiB/s) with 4 file(s) remaining\rupload: contents/BIOMD0000000513.ode to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/contents/BIOMD0000000513.ode\nCompleted 1.4 MiB/1.7 MiB (6.7 MiB/s) with 3 file(s) remaining\rCompleted 1.5 MiB/1.7 MiB (6.6 MiB/s) with 3 file(s) remaining\rupload: contents/BIOMD0000000513.pdf to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/contents/BIOMD0000000513.pdf\nCompleted 1.5 MiB/1.7 MiB (6.6 MiB/s) with 2 file(s) remaining\rCompleted 1.7 MiB/1.7 MiB (6.3 MiB/s) with 2 file(s) remaining\rupload: contents/BIOMD0000000513.png to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/contents/BIOMD0000000513.png\nCompleted 1.7 MiB/1.7 MiB (6.3 MiB/s) with 1 file(s) remaining\rCompleted 1.7 MiB/1.7 MiB (6.0 MiB/s) with 1 file(s) remaining\rupload: contents/curation_notes.txt to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/contents/curation_notes.txt\n\n\u001b[0;36m==================================================== Updating log ===================================================\u001b[0m\nCompleted 10.5 KiB/10.5 KiB (144.1 KiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/6488bb066262268786a27b98/rawLog.txt\n\n\u001b[0;36m=================================================== Saving results ==================================================\u001b[0m\ncreating group /BIOMD0000000513_url.sedml\ncreating dataset /BIOMD0000000513_url.sedml/autogen_plot_for_task1, shape: (32, 1001), type: float64\ndataset created, uuid: d-b3df2dbc-1733201f-777d-030b5b-f8799c, chunk_size: (32, 1001)\ncreating dataset /BIOMD0000000513_url.sedml/autogen_report_for_task1, shape: (56, 1001), type: float64\ndataset created, uuid: d-b3df2dbc-1733201f-32a2-1a3d9c-1d9796, chunk_size: (56, 1001)\ncreating attribute combineArchiveLocation in /BIOMD0000000513_url.sedml\ncreating attribute uri in /BIOMD0000000513_url.sedml\ncreating attribute _type in /BIOMD0000000513_url.sedml/autogen_plot_for_task1\ncreating attribute sedmlDataSetDataTypes in /BIOMD0000000513_url.sedml/autogen_plot_for_task1\ncreating attribute sedmlDataSetIds in /BIOMD0000000513_url.sedml/autogen_plot_for_task1\ncreating attribute sedmlDataSetLabels in /BIOMD0000000513_url.sedml/autogen_plot_for_task1\ncreating attribute sedmlDataSetNames in /BIOMD0000000513_url.sedml/autogen_plot_for_task1\ncreating attribute sedmlDataSetShapes in /BIOMD0000000513_url.sedml/autogen_plot_for_task1\ncreating attribute sedmlId in /BIOMD0000000513_url.sedml/autogen_plot_for_task1\ncreating attribute sedmlName in /BIOMD0000000513_url.sedml/autogen_plot_for_task1\ncreating attribute uri in /BIOMD0000000513_url.sedml/autogen_plot_for_task1\ncreating attribute _type in /BIOMD0000000513_url.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetDataTypes in /BIOMD0000000513_url.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetIds in /BIOMD0000000513_url.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetLabels in /BIOMD0000000513_url.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetNames in /BIOMD0000000513_url.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetShapes in /BIOMD0000000513_url.sedml/autogen_report_for_task1\ncreating attribute sedmlId in /BIOMD0000000513_url.sedml/autogen_report_for_task1\ncreating attribute sedmlName in /BIOMD0000000513_url.sedml/autogen_report_for_task1\ncreating attribute uri in /BIOMD0000000513_url.sedml/autogen_report_for_task1\ncreate_links: /\ngot link: BIOMD0000000513_url.sedml\ncreate_links: /BIOMD0000000513_url.sedml\ngot link: autogen_plot_for_task1\ngot link: autogen_report_for_task1\nwrite_dataset src: /BIOMD0000000513_url.sedml/autogen_plot_for_task1 to tgt: /BIOMD0000000513_url.sedml/autogen_plot_for_task1, shape: (32, 1001), type: float64\niterating over chunks for /BIOMD0000000513_url.sedml/autogen_plot_for_task1\nwriting dataset data for slice: (slice(0, 32, 1), slice(0, 1001, 1))\ndone with dataload for /BIOMD0000000513_url.sedml/autogen_plot_for_task1\nwrite_dataset src: /BIOMD0000000513_url.sedml/autogen_report_for_task1 to tgt: /BIOMD0000000513_url.sedml/autogen_report_for_task1, shape: (56, 1001), type: float64\niterating over chunks for /BIOMD0000000513_url.sedml/autogen_report_for_task1\nwriting dataset data for slice: (slice(0, 56, 1), slice(0, 1001, 1))\ndone with dataload for /BIOMD0000000513_url.sedml/autogen_report_for_task1\nload_file complete\nFile outputs/reports.h5 uploaded to domain: /results/6488bb066262268786a27b98\n\n\u001b[0;36m================================================== Saving final log =================================================\u001b[0m\n\n\u001b[0;36m=========================================== Post-processing simulation run ==========================================\u001b[0m\n\u001b[0;32mProcess the SED-ML file in the COMBINE archive ... succeeded.\nPost the SED-ML file to the API ... succeeded.\nProcess the metadata in the COMBINE archive ... succeeded.\nPost the metadata to the API ... succeeded.\nRetrieve the logs of the simulation run ... succeeded.\nPost the logs to the API ... succeeded.\nProcess and upload the outputs of the simulation run ... succeeded.\nProcess the manifest file in the COMBINE archive ... succeeded.\nRead the manifest and post the files to the API ... succeeded.\nCreate thumbnails from the images specified in the manifest ... succeeded.\nPost thumbnails to the API ... succeeded.\u001b[0m\n\u001b[0;36m================================ Run complete. Thank you for using runBioSimulations! ===============================\u001b[0m","duration":2.910809,"sedDocuments":[{"location":"BIOMD0000000513_url.sedml","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"Archive contains 1 SED-ML documents with 1 models, 1 simulations, 1 tasks, 1 reports, and 1 plots:\r\n  BIOMD0000000513_url.sedml:\r\n    Tasks (1):\r\n      task1\r\n    Reports (1):\r\n      autogen_report_for_task1: 56 data sets\r\n    Plots (1):\r\n      autogen_plot_for_task1: 31 curves\r\n\r\nExecuting SED-ML file 1: BIOMD0000000513_url.sedml ...\r\n  Found 1 tasks and 2 outputs:\r\n    Tasks:\r\n      `task1`\r\n    Outputs:\r\n      `autogen_plot_for_task1`\r\n      `autogen_report_for_task1`\r\n  Executing task 1: `task1`\r\n    Executing simulation ...Check SBML support is at action level 2\r\nSBML file is L2V4\r\nInfo: multiple compartments defined but reaction TPI_g is not located in any of them.\r\nInfo: multiple compartments defined but reaction PYK_c is not located in any of them.\r\nInfo: multiple compartments defined but reaction PFK_g is not located in any of them.\r\nInfo: multiple compartments defined but reaction GlcT_g is not located in any of them.\r\nInfo: multiple compartments defined but reaction PGAM_c is not located in any of them.\r\nInfo: multiple compartments defined but reaction PyrT_c is not located in any of them.\r\nInfo: multiple compartments defined but reaction GlcT_c is not located in any of them.\r\nInfo: multiple compartments defined but reaction ALD_g is not located in any of them.\r\nInfo: multiple compartments defined but reaction ENO_c is not located in any of them.\r\nInfo: multiple compartments defined but reaction HXK_g is not located in any of them.\r\nInfo: multiple compartments defined but reaction _3PGAT_g is not located in any of them.\r\nInfo: multiple compartments defined but reaction PGK_g is not located in any of them.\r\nInfo: multiple compartments defined but reaction G3PDH_g is not located in any of them.\r\nInfo: multiple compartments defined but reaction GPO_c is not located in any of them.\r\nInfo: multiple compartments defined but reaction ATPu_c is not located in any of them.\r\nInfo: multiple compartments defined but reaction GK_g is not located in any of them.\r\nInfo: multiple compartments defined but reaction AK_c is not located in any of them.\r\nInfo: multiple compartments defined but reaction PGI_g is not located in any of them.\r\nInfo: multiple compartments defined but reaction GAPDH_g is not located in any of them.\r\nInfo: multiple compartments defined but reaction AK_g is not located in any of them.\r\nInfo: multiple compartments defined but reaction GDA_g is not located in any of them.\r\nWriting file: /tmp/tmpznoqdndv.psc\r\n\r\nSBML2PSC\r\nin : /tmp/tmp42pz3v94/BIOMD0000000513_url.xml\r\nout: /tmp/tmpznoqdndv.psc\r\nUsing model directory: /home/FCAM/crbmapi/Pysces/psc\r\n/tmp/tmpznoqdndv.psc loading ..... \r\nParsing file: /tmp/tmpznoqdndv.psc\r\nWarning: species \"CO2_g\" (fixed) does not occur in any reaction\r\nWarning: species \"CO2_c\" (fixed) does not occur in any reaction\r\nWarning: species \"O2_c\" (fixed) does not occur in any reaction\r\nInfo: \"Pi_g\" has been initialised but does not occur in a rate equation\r\nInfo: \"O2_c\" has been initialised but does not occur in a rate equation\r\nInfo: \"Pyr_e\" has been initialised but does not occur in a rate equation\r\nInfo: \"CO2_c\" has been initialised but does not occur in a rate equation\r\nInfo: \"CO2_g\" has been initialised but does not occur in a rate equation\r\n \r\nCalculating L matrix . . . . . . . . .  done.\r\nCalculating K matrix . . . . . . . . .  done.\r\n \r\nCVODE time for 1001 points: 0.8111188411712646\r\n \u001b[34msucceeded\u001b[0m\r\n    Generating 2 outputs ...\r\n      Generating output 1: `autogen_report_for_task1` ... \u001b[34msucceeded\u001b[0m\r\n      Generating output 2: `autogen_plot_for_task1` ...","duration":2.486606,"tasks":[{"id":"task1","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":1.142534,"algorithm":"KISAO_0000019","simulatorDetails":[{"key":"method","value":"pysces.PyscesModel.Simulate"},{"key":"arguments","value":{"cvode_abstol":1e-15,"cvode_mxstep":1000,"cvode_reltol":1e-9,"cvode_return_event_timepoints":false,"cvode_stats":false}}]}],"outputs":[{"id":"autogen_report_for_task1","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.420927,"dataSets":[{"id":"autogen_time_for_task1","status":"SUCCEEDED"},{"id":"autogen_task1__2PGA_c","status":"SUCCEEDED"},{"id":"autogen_task1_DHAP_c","status":"SUCCEEDED"},{"id":"autogen_task1_ATP_g","status":"SUCCEEDED"},{"id":"autogen_task1_DHAP_g","status":"SUCCEEDED"},{"id":"autogen_task1_ADP_g","status":"SUCCEEDED"},{"id":"autogen_task1_Glc6P_g","status":"SUCCEEDED"},{"id":"autogen_task1_ADP_c","status":"SUCCEEDED"},{"id":"autogen_task1__3PGA_c","status":"SUCCEEDED"},{"id":"autogen_task1_Fru6P_g","status":"SUCCEEDED"},{"id":"autogen_task1_Pi_g","status":"SUCCEEDED"},{"id":"autogen_task1_O2_c","status":"SUCCEEDED"},{"id":"autogen_task1_Gly_e","status":"SUCCEEDED"},{"id":"autogen_task1_ATP_c","status":"SUCCEEDED"},{"id":"autogen_task1__13BPGA_g","status":"SUCCEEDED"},{"id":"autogen_task1_Glc_c","status":"SUCCEEDED"},{"id":"autogen_task1_Glc_e","status":"SUCCEEDED"},{"id":"autogen_task1_Glc_g","status":"SUCCEEDED"},{"id":"autogen_task1_Pyr_c","status":"SUCCEEDED"},{"id":"autogen_task1_Pyr_e","status":"SUCCEEDED"},{"id":"autogen_task1_NAD_g","status":"SUCCEEDED"},{"id":"autogen_task1_Fru16BP_g","status":"SUCCEEDED"},{"id":"autogen_task1_GA3P_g","status":"SUCCEEDED"},{"id":"autogen_task1_CO2_c","status":"SUCCEEDED"},{"id":"autogen_task1_CO2_g","status":"SUCCEEDED"},{"id":"autogen_task1_Gly3P_c","status":"SUCCEEDED"},{"id":"autogen_task1_Gly3P_g","status":"SUCCEEDED"},{"id":"autogen_task1_PEP_c","status":"SUCCEEDED"},{"id":"autogen_task1_AMP_g","status":"SUCCEEDED"},{"id":"autogen_task1__3PGA_g","status":"SUCCEEDED"},{"id":"autogen_task1_AMP_c","status":"SUCCEEDED"},{"id":"autogen_task1_NADH_g","status":"SUCCEEDED"},{"id":"autogen_task1_cytosol","status":"SUCCEEDED"},{"id":"autogen_task1_glycosome","status":"SUCCEEDED"},{"id":"autogen_task1_default","status":"SUCCEEDED"},{"id":"autogen_task1_TPI_g","status":"SUCCEEDED"},{"id":"autogen_task1_PYK_c","status":"SUCCEEDED"},{"id":"autogen_task1_PFK_g","status":"SUCCEEDED"},{"id":"autogen_task1_GlcT_g","status":"SUCCEEDED"},{"id":"autogen_task1_PGAM_c","status":"SUCCEEDED"},{"id":"autogen_task1_PyrT_c","status":"SUCCEEDED"},{"id":"autogen_task1_GlcT_c","status":"SUCCEEDED"},{"id":"autogen_task1_ALD_g","status":"SUCCEEDED"},{"id":"autogen_task1_ENO_c","status":"SUCCEEDED"},{"id":"autogen_task1_HXK_g","status":"SUCCEEDED"},{"id":"autogen_task1__3PGAT_g","status":"SUCCEEDED"},{"id":"autogen_task1_PGK_g","status":"SUCCEEDED"},{"id":"autogen_task1_G3PDH_g","status":"SUCCEEDED"},{"id":"autogen_task1_GPO_c","status":"SUCCEEDED"},{"id":"autogen_task1_ATPu_c","status":"SUCCEEDED"},{"id":"autogen_task1_GK_g","status":"SUCCEEDED"},{"id":"autogen_task1_AK_c","status":"SUCCEEDED"},{"id":"autogen_task1_PGI_g","status":"SUCCEEDED"},{"id":"autogen_task1_GAPDH_g","status":"SUCCEEDED"},{"id":"autogen_task1_AK_g","status":"SUCCEEDED"},{"id":"autogen_task1_GDA_g","status":"SUCCEEDED"}]},{"id":"autogen_plot_for_task1","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.714274,"curves":[{"id":"autogen_curve_task1__2PGA_c","status":"SUCCEEDED"},{"id":"autogen_curve_task1_DHAP_c","status":"SUCCEEDED"},{"id":"autogen_curve_task1_ATP_g","status":"SUCCEEDED"},{"id":"autogen_curve_task1_DHAP_g","status":"SUCCEEDED"},{"id":"autogen_curve_task1_ADP_g","status":"SUCCEEDED"},{"id":"autogen_curve_task1_Glc6P_g","status":"SUCCEEDED"},{"id":"autogen_curve_task1_ADP_c","status":"SUCCEEDED"},{"id":"autogen_curve_task1__3PGA_c","status":"SUCCEEDED"},{"id":"autogen_curve_task1_Fru6P_g","status":"SUCCEEDED"},{"id":"autogen_curve_task1_Pi_g","status":"SUCCEEDED"},{"id":"autogen_curve_task1_O2_c","status":"SUCCEEDED"},{"id":"autogen_curve_task1_Gly_e","status":"SUCCEEDED"},{"id":"autogen_curve_task1_ATP_c","status":"SUCCEEDED"},{"id":"autogen_curve_task1__13BPGA_g","status":"SUCCEEDED"},{"id":"autogen_curve_task1_Glc_c","status":"SUCCEEDED"},{"id":"autogen_curve_task1_Glc_e","status":"SUCCEEDED"},{"id":"autogen_curve_task1_Glc_g","status":"SUCCEEDED"},{"id":"autogen_curve_task1_Pyr_c","status":"SUCCEEDED"},{"id":"autogen_curve_task1_Pyr_e","status":"SUCCEEDED"},{"id":"autogen_curve_task1_NAD_g","status":"SUCCEEDED"},{"id":"autogen_curve_task1_Fru16BP_g","status":"SUCCEEDED"},{"id":"autogen_curve_task1_GA3P_g","status":"SUCCEEDED"},{"id":"autogen_curve_task1_CO2_c","status":"SUCCEEDED"},{"id":"autogen_curve_task1_CO2_g","status":"SUCCEEDED"},{"id":"autogen_curve_task1_Gly3P_c","status":"SUCCEEDED"},{"id":"autogen_curve_task1_Gly3P_g","status":"SUCCEEDED"},{"id":"autogen_curve_task1_PEP_c","status":"SUCCEEDED"},{"id":"autogen_curve_task1_AMP_g","status":"SUCCEEDED"},{"id":"autogen_curve_task1__3PGA_g","status":"SUCCEEDED"},{"id":"autogen_curve_task1_AMP_c","status":"SUCCEEDED"},{"id":"autogen_curve_task1_NADH_g","status":"SUCCEEDED"}]}]}]}