{"status":"SUCCEEDED","exception":null,"skipReason":null,"output":"\u001b[0;36mThank you for using runBioSimulations!\u001b[0m\n\n\u001b[0;36m================================================ Loading Singularity ================================================\u001b[0m\n\n\u001b[0;36m=================================================== Set up storage ==================================================\u001b[0m\n\n\u001b[0;36m========================================== Downloading COMBINE/OMEX archive =========================================\u001b[0m\n  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current\n                                 Dload  Upload   Total   Spent    Left  Speed\n\r  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0\r100   139  100   139    0     0    444      0 --:--:-- --:--:-- --:--:--   445\n\r100 2853k  100 2853k    0     0  6127k      0 --:--:-- --:--:-- --:--:-- 6127k\n\n\u001b[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================\u001b[0m\nINFO:    Using cached SIF image\n \u001b[34msucceeded\u001b[0m\n\n  Executed 1 tasks and 5 outputs:\n    Tasks:\n      Succeeded: 1\n      Skipped: 0\n      Failed: 0\n    Outputs:\n      Succeeded: 5\n      Skipped: 0\n      Failed: 0\n\nBundling outputs ...\nCleaning up ...\n\n============= SUMMARY =============\nExecuted 1 SED documents:\n  SED documents (1):\n    Succeeded: 1\n    Skipped: 0\n    Failed: 0\n  Tasks (1):\n    Succeeded: 1\n    Skipped: 0\n    Failed: 0\n  Outputs (5):\n    Succeeded: 5\n    Skipped: 0\n    Failed: 0\n\n\n\u001b[0;36m===================================================== Saving log ====================================================\u001b[0m\nCompleted 1.6 KiB/1.6 KiB (24.3 KiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/rawLog.txt\nCompleted 15.4 KiB/15.4 KiB (191.5 KiB/s) with 1 file(s) remaining\rupload: outputs/log.yml to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/outputs/log.yml\n\n\u001b[0;36m================================================== Zipping outputs ==================================================\u001b[0m\n  adding: outputs/ (stored 0%)\n  adding: outputs/log.yml (deflated 89%)\n  adding: outputs/reports.h5 (deflated 11%)\n  adding: outputs/Nishio2008.sedml/ (stored 0%)\n  adding: outputs/Nishio2008.sedml/plot_3_task1.pdf (deflated 34%)\n  adding: outputs/Nishio2008.sedml/plot_2_task1.pdf (deflated 34%)\n  adding: outputs/Nishio2008.sedml/plot_4_task1.pdf (deflated 33%)\n  adding: outputs/Nishio2008.sedml/plot_1_task1.pdf (deflated 37%)\n  adding: rawLog.txt (deflated 72%)\n\n\u001b[0;36m=================================================== Saving outputs ==================================================\u001b[0m\nCompleted 256.0 KiB/849.6 KiB (4.7 MiB/s) with 1 file(s) remaining\rCompleted 512.0 KiB/849.6 KiB (8.9 MiB/s) with 1 file(s) remaining\rCompleted 768.0 KiB/849.6 KiB (12.1 MiB/s) with 1 file(s) remaining\rCompleted 849.6 KiB/849.6 KiB (5.8 MiB/s) with 1 file(s) remaining \rupload: outputs/reports.h5 to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/outputs/reports.h5\nCompleted 256.0 KiB/857.3 KiB (5.1 MiB/s) with 7 file(s) remaining\rCompleted 512.0 KiB/857.3 KiB (9.0 MiB/s) with 7 file(s) remaining\rCompleted 768.0 KiB/857.3 KiB (10.3 MiB/s) with 7 file(s) remaining\rCompleted 778.5 KiB/857.3 KiB (6.2 MiB/s) with 7 file(s) remaining \rupload: outputs/Nishio2008.sedml/plot_3_task1.pdf to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/outputs/Nishio2008.sedml/plot_3_task1.pdf\nCompleted 778.5 KiB/857.3 KiB (6.2 MiB/s) with 6 file(s) remaining\rCompleted 787.6 KiB/857.3 KiB (6.1 MiB/s) with 6 file(s) remaining\rupload: outputs/Nishio2008.sedml/plot_2_task1.pdf to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/outputs/Nishio2008.sedml/plot_2_task1.pdf\nCompleted 787.6 KiB/857.3 KiB (6.1 MiB/s) with 5 file(s) remaining\rCompleted 808.6 KiB/857.3 KiB (6.1 MiB/s) with 5 file(s) remaining\rupload: ./output.zip to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/output.zip\nCompleted 808.6 KiB/857.3 KiB (6.1 MiB/s) with 4 file(s) remaining\rCompleted 833.9 KiB/857.3 KiB (5.6 MiB/s) with 4 file(s) remaining\rupload: outputs/plots.zip to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/outputs/plots.zip\nCompleted 833.9 KiB/857.3 KiB (5.6 MiB/s) with 3 file(s) remaining\rCompleted 845.7 KiB/857.3 KiB (5.4 MiB/s) with 3 file(s) remaining\rupload: outputs/Nishio2008.sedml/plot_4_task1.pdf to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/outputs/Nishio2008.sedml/plot_4_task1.pdf\nCompleted 845.7 KiB/857.3 KiB (5.4 MiB/s) with 2 file(s) remaining\rCompleted 854.3 KiB/857.3 KiB (5.1 MiB/s) with 2 file(s) remaining\rupload: outputs/Nishio2008.sedml/plot_1_task1.pdf to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/outputs/Nishio2008.sedml/plot_1_task1.pdf\nCompleted 854.3 KiB/857.3 KiB (5.1 MiB/s) with 1 file(s) remaining\rCompleted 857.3 KiB/857.3 KiB (5.1 MiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/rawLog.txt\n\n\u001b[0;36m====================================== Saving contents of COMBINE/OMEX archive ======================================\u001b[0m\nArchive:  archive.omex\n  inflating: contents/BIOMD0000000571-biopax2.owl  \n  inflating: contents/BIOMD0000000571-biopax3.owl  \n  inflating: contents/BIOMD0000000571-matlab.m  \n  inflating: contents/BIOMD0000000571-octave.m  \n  inflating: contents/BIOMD0000000571.m  \n  inflating: contents/BIOMD0000000571.ode  \n  inflating: contents/BIOMD0000000571.pdf  \n  inflating: contents/BIOMD0000000571.png  \n  inflating: contents/BIOMD0000000571.svg  \n  inflating: contents/BIOMD0000000571.vcml  \n  inflating: contents/BIOMD0000000571_url.xml  \n  inflating: contents/Nishio2008.cps  \n  inflating: contents/Nishio2008.sedml  \n  inflating: contents/curation_image.png  \n  inflating: contents/curation_notes.txt  \n  inflating: contents/metadata.rdf   \n  inflating: contents/manifest.xml   \nCompleted 231.6 KiB/5.0 MiB (2.4 MiB/s) with 17 file(s) remaining\rupload: contents/BIOMD0000000571-biopax3.owl to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/contents/BIOMD0000000571-biopax3.owl\nCompleted 231.6 KiB/5.0 MiB (2.4 MiB/s) with 16 file(s) remaining\rCompleted 487.6 KiB/5.0 MiB (4.1 MiB/s) with 16 file(s) remaining\rCompleted 743.6 KiB/5.0 MiB (5.9 MiB/s) with 16 file(s) remaining\rCompleted 879.9 KiB/5.0 MiB (6.6 MiB/s) with 16 file(s) remaining\rupload: contents/BIOMD0000000571-biopax2.owl to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/contents/BIOMD0000000571-biopax2.owl\nCompleted 879.9 KiB/5.0 MiB (6.6 MiB/s) with 15 file(s) remaining\rCompleted 1.1 MiB/5.0 MiB (8.0 MiB/s) with 15 file(s) remaining  \rCompleted 1.2 MiB/5.0 MiB (7.7 MiB/s) with 15 file(s) remaining  \rupload: contents/BIOMD0000000571-matlab.m to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/contents/BIOMD0000000571-matlab.m\nCompleted 1.2 MiB/5.0 MiB (7.7 MiB/s) with 14 file(s) remaining\rCompleted 1.4 MiB/5.0 MiB (9.2 MiB/s) with 14 file(s) remaining\rCompleted 1.4 MiB/5.0 MiB (9.0 MiB/s) with 14 file(s) remaining\rupload: contents/curation_notes.txt to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/contents/curation_notes.txt\nCompleted 1.4 MiB/5.0 MiB (9.0 MiB/s) with 13 file(s) remaining\rCompleted 1.7 MiB/5.0 MiB (10.5 MiB/s) with 13 file(s) remaining\rCompleted 1.8 MiB/5.0 MiB (10.4 MiB/s) with 13 file(s) remaining\rupload: contents/BIOMD0000000571.svg to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/contents/BIOMD0000000571.svg\nCompleted 1.8 MiB/5.0 MiB (10.4 MiB/s) with 12 file(s) remaining\rCompleted 2.0 MiB/5.0 MiB (11.6 MiB/s) with 12 file(s) remaining\rCompleted 2.2 MiB/5.0 MiB (12.5 MiB/s) with 12 file(s) remaining\rupload: contents/BIOMD0000000571.vcml to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/contents/BIOMD0000000571.vcml\nCompleted 2.2 MiB/5.0 MiB (12.5 MiB/s) with 11 file(s) remaining\rCompleted 2.5 MiB/5.0 MiB (13.6 MiB/s) with 11 file(s) remaining\rCompleted 2.5 MiB/5.0 MiB (13.6 MiB/s) with 11 file(s) remaining\rupload: contents/manifest.xml to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/contents/manifest.xml\nCompleted 2.5 MiB/5.0 MiB (13.6 MiB/s) with 10 file(s) remaining\rCompleted 2.7 MiB/5.0 MiB (14.7 MiB/s) with 10 file(s) remaining\rCompleted 3.0 MiB/5.0 MiB (15.9 MiB/s) with 10 file(s) remaining\rCompleted 3.2 MiB/5.0 MiB (16.8 MiB/s) with 10 file(s) remaining\rupload: contents/BIOMD0000000571_url.xml to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/contents/BIOMD0000000571_url.xml\nCompleted 3.2 MiB/5.0 MiB (16.8 MiB/s) with 9 file(s) remaining\rCompleted 3.4 MiB/5.0 MiB (17.1 MiB/s) with 9 file(s) remaining\rCompleted 3.5 MiB/5.0 MiB (17.7 MiB/s) with 9 file(s) remaining\rupload: contents/Nishio2008.sedml to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/contents/Nishio2008.sedml\nCompleted 3.5 MiB/5.0 MiB (17.7 MiB/s) with 8 file(s) remaining\rCompleted 3.8 MiB/5.0 MiB (17.8 MiB/s) with 8 file(s) remaining\rCompleted 3.8 MiB/5.0 MiB (17.0 MiB/s) with 8 file(s) remaining\rCompleted 4.1 MiB/5.0 MiB (18.0 MiB/s) with 8 file(s) remaining\rupload: contents/Nishio2008.cps to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/contents/Nishio2008.cps\nCompleted 4.1 MiB/5.0 MiB (18.0 MiB/s) with 7 file(s) remaining\rCompleted 4.1 MiB/5.0 MiB (17.8 MiB/s) with 7 file(s) remaining\rupload: contents/curation_image.png to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/contents/curation_image.png\nCompleted 4.1 MiB/5.0 MiB (17.8 MiB/s) with 6 file(s) remaining\rCompleted 4.1 MiB/5.0 MiB (17.7 MiB/s) with 6 file(s) remaining\rupload: contents/BIOMD0000000571-octave.m to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/contents/BIOMD0000000571-octave.m\nCompleted 4.1 MiB/5.0 MiB (17.7 MiB/s) with 5 file(s) remaining\rCompleted 4.4 MiB/5.0 MiB (18.4 MiB/s) with 5 file(s) remaining\rCompleted 4.4 MiB/5.0 MiB (18.3 MiB/s) with 5 file(s) remaining\rupload: contents/BIOMD0000000571.m to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/contents/BIOMD0000000571.m\nCompleted 4.4 MiB/5.0 MiB (18.3 MiB/s) with 4 file(s) remaining\rCompleted 4.4 MiB/5.0 MiB (18.2 MiB/s) with 4 file(s) remaining\rupload: contents/metadata.rdf to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/contents/metadata.rdf\nCompleted 4.4 MiB/5.0 MiB (18.2 MiB/s) with 3 file(s) remaining\rCompleted 4.7 MiB/5.0 MiB (18.7 MiB/s) with 3 file(s) remaining\rCompleted 4.7 MiB/5.0 MiB (18.3 MiB/s) with 3 file(s) remaining\rupload: contents/BIOMD0000000571.ode to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/contents/BIOMD0000000571.ode\nCompleted 4.7 MiB/5.0 MiB (18.3 MiB/s) with 2 file(s) remaining\rCompleted 4.9 MiB/5.0 MiB (18.9 MiB/s) with 2 file(s) remaining\rupload: contents/BIOMD0000000571.pdf to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/contents/BIOMD0000000571.pdf\nCompleted 4.9 MiB/5.0 MiB (18.9 MiB/s) with 1 file(s) remaining\rCompleted 5.0 MiB/5.0 MiB (15.2 MiB/s) with 1 file(s) remaining\rupload: contents/BIOMD0000000571.png to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/contents/BIOMD0000000571.png\n\n\u001b[0;36m==================================================== Updating log ===================================================\u001b[0m\nCompleted 11.2 KiB/11.2 KiB (185.7 KiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/647111ce0dcacb55678c964f/rawLog.txt\n\n\u001b[0;36m=================================================== Saving results ==================================================\u001b[0m\ncreating group /Nishio2008.sedml\ncreating dataset /Nishio2008.sedml/autogen_report_for_task1, shape: (188, 1001), type: float64\ndataset created, uuid: d-a82101e8-5e87a52c-ccec-d627cd-23ff59, chunk_size: (188, 1001)\ncreating dataset /Nishio2008.sedml/plot_1_task1, shape: (3, 1001), type: float64\ndataset created, uuid: d-a82101e8-5e87a52c-4f41-dab605-a27486, chunk_size: (3, 1001)\ncreating dataset /Nishio2008.sedml/plot_2_task1, shape: (2, 1001), type: float64\ndataset created, uuid: d-a82101e8-5e87a52c-191b-4d6221-da69cc, chunk_size: (2, 1001)\ncreating dataset /Nishio2008.sedml/plot_3_task1, shape: (2, 1001), type: float64\ndataset created, uuid: d-a82101e8-5e87a52c-3e98-e1ce87-b08b18, chunk_size: (2, 1001)\ncreating dataset /Nishio2008.sedml/plot_4_task1, shape: (4, 1001), type: float64\ndataset created, uuid: d-a82101e8-5e87a52c-f0dd-b895fd-e95ba1, chunk_size: (4, 1001)\ncreating attribute combineArchiveLocation in /Nishio2008.sedml\ncreating attribute uri in /Nishio2008.sedml\ncreating attribute _type in /Nishio2008.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetDataTypes in /Nishio2008.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetIds in /Nishio2008.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetLabels in /Nishio2008.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetNames in /Nishio2008.sedml/autogen_report_for_task1\ncreating attribute sedmlDataSetShapes in /Nishio2008.sedml/autogen_report_for_task1\ncreating attribute sedmlId in /Nishio2008.sedml/autogen_report_for_task1\ncreating attribute sedmlName in /Nishio2008.sedml/autogen_report_for_task1\ncreating attribute uri in /Nishio2008.sedml/autogen_report_for_task1\ncreating attribute _type in /Nishio2008.sedml/plot_1_task1\ncreating attribute sedmlDataSetDataTypes in /Nishio2008.sedml/plot_1_task1\ncreating attribute sedmlDataSetIds in /Nishio2008.sedml/plot_1_task1\ncreating attribute sedmlDataSetLabels in /Nishio2008.sedml/plot_1_task1\ncreating attribute sedmlDataSetNames in /Nishio2008.sedml/plot_1_task1\ncreating attribute sedmlDataSetShapes in /Nishio2008.sedml/plot_1_task1\ncreating attribute sedmlId in /Nishio2008.sedml/plot_1_task1\ncreating attribute sedmlName in /Nishio2008.sedml/plot_1_task1\ncreating attribute uri in /Nishio2008.sedml/plot_1_task1\ncreating attribute _type in /Nishio2008.sedml/plot_2_task1\ncreating attribute sedmlDataSetDataTypes in /Nishio2008.sedml/plot_2_task1\ncreating attribute sedmlDataSetIds in /Nishio2008.sedml/plot_2_task1\ncreating attribute sedmlDataSetLabels in /Nishio2008.sedml/plot_2_task1\ncreating attribute sedmlDataSetNames in /Nishio2008.sedml/plot_2_task1\ncreating attribute sedmlDataSetShapes in /Nishio2008.sedml/plot_2_task1\ncreating attribute sedmlId in /Nishio2008.sedml/plot_2_task1\ncreating attribute sedmlName in /Nishio2008.sedml/plot_2_task1\ncreating attribute uri in /Nishio2008.sedml/plot_2_task1\ncreating attribute _type in /Nishio2008.sedml/plot_3_task1\ncreating attribute sedmlDataSetDataTypes in /Nishio2008.sedml/plot_3_task1\ncreating attribute sedmlDataSetIds in /Nishio2008.sedml/plot_3_task1\ncreating attribute sedmlDataSetLabels in /Nishio2008.sedml/plot_3_task1\ncreating attribute sedmlDataSetNames in /Nishio2008.sedml/plot_3_task1\ncreating attribute sedmlDataSetShapes in /Nishio2008.sedml/plot_3_task1\ncreating attribute sedmlId in /Nishio2008.sedml/plot_3_task1\ncreating attribute sedmlName in /Nishio2008.sedml/plot_3_task1\ncreating attribute uri in /Nishio2008.sedml/plot_3_task1\ncreating attribute _type in /Nishio2008.sedml/plot_4_task1\ncreating attribute sedmlDataSetDataTypes in /Nishio2008.sedml/plot_4_task1\ncreating attribute sedmlDataSetIds in /Nishio2008.sedml/plot_4_task1\ncreating attribute sedmlDataSetLabels in /Nishio2008.sedml/plot_4_task1\ncreating attribute sedmlDataSetNames in /Nishio2008.sedml/plot_4_task1\ncreating attribute sedmlDataSetShapes in /Nishio2008.sedml/plot_4_task1\ncreating attribute sedmlId in /Nishio2008.sedml/plot_4_task1\ncreating attribute sedmlName in /Nishio2008.sedml/plot_4_task1\ncreating attribute uri in /Nishio2008.sedml/plot_4_task1\ncreate_links: /\ngot link: Nishio2008.sedml\ncreate_links: /Nishio2008.sedml\ngot link: autogen_report_for_task1\ngot link: plot_1_task1\ngot link: plot_2_task1\ngot link: plot_3_task1\ngot link: plot_4_task1\nwrite_dataset src: /Nishio2008.sedml/autogen_report_for_task1 to tgt: /Nishio2008.sedml/autogen_report_for_task1, shape: (188, 1001), type: float64\niterating over chunks for /Nishio2008.sedml/autogen_report_for_task1\nwriting dataset data for slice: (slice(0, 188, 1), slice(0, 1001, 1))\ndone with dataload for /Nishio2008.sedml/autogen_report_for_task1\nwrite_dataset src: /Nishio2008.sedml/plot_1_task1 to tgt: /Nishio2008.sedml/plot_1_task1, shape: (3, 1001), type: float64\niterating over chunks for /Nishio2008.sedml/plot_1_task1\nwriting dataset data for slice: (slice(0, 3, 1), slice(0, 1001, 1))\ndone with dataload for /Nishio2008.sedml/plot_1_task1\nwrite_dataset src: /Nishio2008.sedml/plot_2_task1 to tgt: /Nishio2008.sedml/plot_2_task1, shape: (2, 1001), type: float64\niterating over chunks for /Nishio2008.sedml/plot_2_task1\nwriting dataset data for slice: (slice(0, 2, 1), slice(0, 1001, 1))\ndone with dataload for /Nishio2008.sedml/plot_2_task1\nwrite_dataset src: /Nishio2008.sedml/plot_3_task1 to tgt: /Nishio2008.sedml/plot_3_task1, shape: (2, 1001), type: float64\niterating over chunks for /Nishio2008.sedml/plot_3_task1\nwriting dataset data for slice: (slice(0, 2, 1), slice(0, 1001, 1))\ndone with dataload for /Nishio2008.sedml/plot_3_task1\nwrite_dataset src: /Nishio2008.sedml/plot_4_task1 to tgt: /Nishio2008.sedml/plot_4_task1, shape: (4, 1001), type: float64\niterating over chunks for /Nishio2008.sedml/plot_4_task1\nwriting dataset data for slice: (slice(0, 4, 1), slice(0, 1001, 1))\ndone with dataload for /Nishio2008.sedml/plot_4_task1\nload_file complete\nFile outputs/reports.h5 uploaded to domain: /results/647111ce0dcacb55678c964f\n\n\u001b[0;36m================================================== Saving final log =================================================\u001b[0m\n\n\u001b[0;36m=========================================== Post-processing simulation run ==========================================\u001b[0m\n\u001b[0;32mProcess the SED-ML file in the COMBINE archive ... succeeded.\nPost the SED-ML file to the API ... succeeded.\nRetrieve the logs of the simulation run ... succeeded.\nPost the logs to the API ... succeeded.\nProcess and upload the outputs of the simulation run ... succeeded.\nProcess the manifest file in the COMBINE archive ... succeeded.\nRead the manifest and post the files to the API ... succeeded.\nCreate thumbnails from the images specified in the manifest ... succeeded.\nPost thumbnails to the API ... succeeded.\nProcess the metadata in the COMBINE archive ... succeeded.\nPost the metadata to the API ... succeeded.\u001b[0m\n\u001b[0;36m================================ Run complete. Thank you for using runBioSimulations! ===============================\u001b[0m","duration":4.637253,"sedDocuments":[{"location":"Nishio2008.sedml","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"Archive contains 1 SED-ML documents with 1 models, 1 simulations, 1 tasks, 1 reports, and 4 plots:\r\n  Nishio2008.sedml:\r\n    Tasks (1):\r\n      task1\r\n    Reports (1):\r\n      autogen_report_for_task1: 188 data sets\r\n    Plots (4):\r\n      plot_1_task1: 2 curves\r\n      plot_2_task1: 1 curves\r\n      plot_3_task1: 1 curves\r\n      plot_4_task1: 3 curves\r\n\r\nExecuting SED-ML file 1: Nishio2008.sedml ...\r\n  Found 1 tasks and 5 outputs:\r\n    Tasks:\r\n      `task1`\r\n    Outputs:\r\n      `autogen_report_for_task1`\r\n      `plot_1_task1`\r\n      `plot_2_task1`\r\n      `plot_3_task1`\r\n      `plot_4_task1`\r\n  Executing task 1: `task1`\r\n    Executing simulation ... \u001b[34msucceeded\u001b[0m\r\n    Generating 5 outputs ...\r\n      Generating output 1: `plot_1_task1` ... \u001b[34msucceeded\u001b[0m\r\n      Generating output 2: `plot_2_task1` ... \u001b[34msucceeded\u001b[0m\r\n      Generating output 3: `plot_3_task1` ... \u001b[34msucceeded\u001b[0m\r\n      Generating output 4: `plot_4_task1` ... \u001b[34msucceeded\u001b[0m\r\n      Generating output 5: `autogen_report_for_task1` ...","duration":3.820991,"tasks":[{"id":"task1","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.627748,"algorithm":"KISAO_0000560","simulatorDetails":[{"key":"methodName","value":"deterministic"},{"key":"methodCode","value":22},{"key":"parameters","value":{"Absolute Tolerance":1e-12,"Integrate Reduced Model":false,"Max Internal Steps":10000,"Relative Tolerance":0.000001}}]}],"outputs":[{"id":"plot_1_task1","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.406832,"curves":[{"id":"p1_curve_1_task1","status":"SUCCEEDED"},{"id":"p1_curve_2_task1","status":"SUCCEEDED"}]},{"id":"plot_2_task1","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.357616,"curves":[{"id":"p2_curve_1_task1","status":"SUCCEEDED"}]},{"id":"plot_3_task1","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.182066,"curves":[{"id":"p3_curve_1_task1","status":"SUCCEEDED"}]},{"id":"plot_4_task1","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.217375,"curves":[{"id":"p4_curve_1_task1","status":"SUCCEEDED"},{"id":"p4_curve_2_task1","status":"SUCCEEDED"},{"id":"p4_curve_3_task1","status":"SUCCEEDED"}]},{"id":"autogen_report_for_task1","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":1.441322,"dataSets":[{"id":"autogen_time_for_task1","status":"SUCCEEDED"},{"id":"autogen_task1_IIA","status":"SUCCEEDED"},{"id":"autogen_task1_IIA_P","status":"SUCCEEDED"},{"id":"autogen_task1_cAMP","status":"SUCCEEDED"},{"id":"autogen_task1_Mlc_Mlcsite_ptsGp1","status":"SUCCEEDED"},{"id":"autogen_task1_mRNA_ptsG","status":"SUCCEEDED"},{"id":"autogen_task1_mRNA_ptsH","status":"SUCCEEDED"},{"id":"autogen_task1_mRNA_ptsI","status":"SUCCEEDED"},{"id":"autogen_task1_CRP","status":"SUCCEEDED"},{"id":"autogen_task1_CRPsiteI_crp","status":"SUCCEEDED"},{"id":"autogen_task1_CRPsiteII_crp","status":"SUCCEEDED"},{"id":"autogen_task1_CRPsite_cyaA","status":"SUCCEEDED"},{"id":"autogen_task1_CRPsite_genome","status":"SUCCEEDED"},{"id":"autogen_task1_CRPsite_ptsGp1","status":"SUCCEEDED"},{"id":"autogen_task1_CRPsite_ptsGp2","status":"SUCCEEDED"},{"id":"autogen_task1_CRPsite_ptsHp0","status":"SUCCEEDED"},{"id":"autogen_task1_CRPsite_ptsHp1","status":"SUCCEEDED"},{"id":"autogen_task1_CRPsite_ptsIp0","status":"SUCCEEDED"},{"id":"autogen_task1_CRPsite_ptsIp1","status":"SUCCEEDED"},{"id":"autogen_task1_CRPsite_mlcp1","status":"SUCCEEDED"},{"id":"autogen_task1_CRPsite_mlcp2","status":"SUCCEEDED"},{"id":"autogen_task1_Mlc","status":"SUCCEEDED"},{"id":"autogen_task1_Mlcsite_mlcp1","status":"SUCCEEDED"},{"id":"autogen_task1_Mlcsite_mlcp2","status":"SUCCEEDED"},{"id":"autogen_task1_Mlcsite_ptsGp1","status":"SUCCEEDED"},{"id":"autogen_task1_Mlcsite_ptsGp2","status":"SUCCEEDED"},{"id":"autogen_task1_Mlcsite_ptsHp0","status":"SUCCEEDED"},{"id":"autogen_task1_Mlcsite_ptsIp0","status":"SUCCEEDED"},{"id":"autogen_task1_CRP_cAMP","status":"SUCCEEDED"},{"id":"autogen_task1_CRP_cAMP_CRPsiteI_crp","status":"SUCCEEDED"},{"id":"autogen_task1_CRP_cAMP_CRPsiteII_crp","status":"SUCCEEDED"},{"id":"autogen_task1_CRP_cAMP_CRPsite_cyaA","status":"SUCCEEDED"},{"id":"autogen_task1_CRP_cAMP_CRPsite_genome","status":"SUCCEEDED"},{"id":"autogen_task1_CRP_cAMP_CRPsite_ptsGp1","status":"SUCCEEDED"},{"id":"autogen_task1_CRP_cAMP_CRPsite_ptsGp2","status":"SUCCEEDED"},{"id":"autogen_task1_CRP_cAMP_CRPsite_ptsHp0","status":"SUCCEEDED"},{"id":"autogen_task1_CRP_cAMP_CRPsite_ptsHp1","status":"SUCCEEDED"},{"id":"autogen_task1_CRP_cAMP_CRPsite_ptsIp0","status":"SUCCEEDED"},{"id":"autogen_task1_CRP_cAMP_CRPsite_ptsIp1","status":"SUCCEEDED"},{"id":"autogen_task1_CRP_cAMP_CRPsite_mlcp1","status":"SUCCEEDED"},{"id":"autogen_task1_CRP_cAMP_CRPsite_mlcp2","status":"SUCCEEDED"},{"id":"autogen_task1_Mlc_Mlcsite_ptsGp2","status":"SUCCEEDED"},{"id":"autogen_task1_Mlc_Mlcsite_ptsIp0","status":"SUCCEEDED"},{"id":"autogen_task1_Mlc_Mlcsite_ptsHp0","status":"SUCCEEDED"},{"id":"autogen_task1_Mlc_Mlcsite_mlcp1","status":"SUCCEEDED"},{"id":"autogen_task1_Mlc_Mlcsite_mlcp2","status":"SUCCEEDED"},{"id":"autogen_task1_IICB","status":"SUCCEEDED"},{"id":"autogen_task1_IICB_Mlc","status":"SUCCEEDED"},{"id":"autogen_task1_CYA","status":"SUCCEEDED"},{"id":"autogen_task1_IIA_P_CYA","status":"SUCCEEDED"},{"id":"autogen_task1_mRNA_cyaA","status":"SUCCEEDED"},{"id":"autogen_task1_mRNA_crp","status":"SUCCEEDED"},{"id":"autogen_task1_mRNA_crr","status":"SUCCEEDED"},{"id":"autogen_task1_mRNA_mlc","status":"SUCCEEDED"},{"id":"autogen_task1_IICB_P","status":"SUCCEEDED"},{"id":"autogen_task1_HPr_P","status":"SUCCEEDED"},{"id":"autogen_task1_HPr","status":"SUCCEEDED"},{"id":"autogen_task1_EI_P","status":"SUCCEEDED"},{"id":"autogen_task1_EI","status":"SUCCEEDED"},{"id":"autogen_task1_cyaA","status":"SUCCEEDED"},{"id":"autogen_task1_cyaA_basal","status":"SUCCEEDED"},{"id":"autogen_task1_crp","status":"SUCCEEDED"},{"id":"autogen_task1_crp_basal","status":"SUCCEEDED"},{"id":"autogen_task1_ptsGp1","status":"SUCCEEDED"},{"id":"autogen_task1_ptsGp2","status":"SUCCEEDED"},{"id":"autogen_task1_ptsHp0","status":"SUCCEEDED"},{"id":"autogen_task1_ptsHp1","status":"SUCCEEDED"},{"id":"autogen_task1_ptsIp0","status":"SUCCEEDED"},{"id":"autogen_task1_ptsIp1","status":"SUCCEEDED"},{"id":"autogen_task1_crr","status":"SUCCEEDED"},{"id":"autogen_task1_mlcp1","status":"SUCCEEDED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