{"status":"SUCCEEDED","exception":null,"skipReason":null,"output":"\u001b[0;36mThank you for using runBioSimulations!\u001b[0m\n\n\u001b[0;36m================================================ Loading Singularity ================================================\u001b[0m\n\n\u001b[0;36m=================================================== Set up storage ==================================================\u001b[0m\n\n\u001b[0;36m========================================== Downloading COMBINE/OMEX archive =========================================\u001b[0m\n  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current\n                                 Dload  Upload   Total   Spent    Left  Speed\n\r  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0\r100   139  100   139    0     0    461      0 --:--:-- --:--:-- --:--:--   461\n\r100  650k  100  650k    0     0  1462k      0 --:--:-- --:--:-- --:--:-- 1462k\n\n\u001b[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================\u001b[0m\nINFO:    Using cached SIF image\nTraceback (most recent call last):\n  File \"/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py\", line 247, in <module>\n    if not update_paths(args.path, args.scripts_dir, args.clear_args, args.extra_args):\n  File \"/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py\", line 213, in update_paths\n    update_scripts(scripts_dir, new_path, clear_args, extra_args)\n  File \"/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py\", line 125, in update_scripts\n    update_script(os.path.join(bin_dir, fn), new_path, clear_args, extra_args)\n  File \"/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py\", line 118, in update_script\n    with open(script_filename, 'w') as f:\nOSError: [Errno 30] Read-only file system: '/home/opencor/OpenCOR/bin/../python/bin/biosimulators-utils'\n/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33mCOMBINE/OMEX archive may be invalid.\n  - The manifest does not include its parent COMBINE/OMEX archive. Manifests should include their parent COMBINE/OMEX archives.\u001b[0m\n  warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33mThe SED document is potentially incorrect.\n  - Model `model` may be invalid.\n    - The changes of the model may be invalid.\n      - Change 1 may be invalid.\n        - XPath could not be validated.\n      - Change 2 may be invalid.\n        - XPath could not be validated.\n      - Change 3 may be invalid.\n        - XPath could not be validated.\n      - Change 4 may be invalid.\n        - XPath could not be validated.\n      - Change 5 may be invalid.\n        - XPath could not be validated.\n      - Change 6 may be invalid.\n        - XPath could not be validated.\n      - Change 7 may be invalid.\n        - XPath could not be validated.\n      - Change 8 may be invalid.\n        - XPath could not be validated.\n      - Change 9 may be invalid.\n        - XPath could not be validated.\n      - Change 10 may be invalid.\n        - XPath could not be validated.\n      - Change 11 may be invalid.\n        - XPath could not be validated.\n      - Change 12 may be invalid.\n        - XPath could not be validated.\n      - Change 13 may be invalid.\n        - XPath could not be validated.\n      - Change 14 may be invalid.\n        - XPath could not be validated.\n      - Change 15 may be invalid.\n        - XPath could not be validated.\n      - Change 16 may be invalid.\n        - XPath could not be validated.\n      - Change 17 may be invalid.\n        - XPath could not be validated.\n      - Change 18 may be invalid.\n        - XPath could not be validated.\n      - Change 19 may be invalid.\n        - XPath could not be validated.\n      - Change 20 may be invalid.\n        - XPath could not be validated.\n      - Change 21 may be invalid.\n        - XPath could not be validated.\n      - Change 22 may be invalid.\n        - XPath could not be validated.\n      - Change 23 may be invalid.\n        - XPath could not be validated.\n      - Change 24 may be invalid.\n        - XPath could not be validated.\n      - Change 25 may be invalid.\n        - XPath could not be validated.\n      - Change 26 may be invalid.\n        - XPath could not be validated.\n      - Change 27 may be invalid.\n        - XPath could not be validated.\n      - Change 28 may be invalid.\n        - XPath could not be validated.\n  - Data generator `data_generator_value_component_environment_variable_time` may be invalid.\n    - Variable `value_component_environment_variable_time` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_capillary_dynamics_variable_VEC` may be invalid.\n    - Variable `value_component_capillary_dynamics_variable_VEC` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_capillary_dynamics_variable_PPD` may be invalid.\n    - Variable `value_component_capillary_dynamics_variable_PPD` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_capillary_dynamics_variable_RVS` may be invalid.\n    - Variable `value_component_capillary_dynamics_variable_RVS` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_capillary_dynamics_variable_DFP` may be invalid.\n    - Variable `value_component_capillary_dynamics_variable_DFP` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_capillary_dynamics_variable_VPF` may be invalid.\n    - Variable `value_component_capillary_dynamics_variable_VPF` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_capillary_dynamics_variable_BFN` may be invalid.\n    - Variable `value_component_capillary_dynamics_variable_BFN` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_capillary_dynamics_variable_PVS` may be invalid.\n    - Variable `value_component_capillary_dynamics_variable_PVS` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_capillary_pressure_variable_PC` may be invalid.\n    - Variable `value_component_capillary_pressure_variable_PC` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_rate_of_fluid_out_of_capillaries_variable_VTC` may be invalid.\n    - Variable `value_component_rate_of_fluid_out_of_capillaries_variable_VTC` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_plasma_volume_variable_VP` may be invalid.\n    - Variable `value_component_plasma_volume_variable_VP` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_plasma_volume_variable_VPD` may be invalid.\n    - Variable `value_component_plasma_volume_variable_VPD` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_plasma_protein_concentration_variable_CPP` may be invalid.\n    - Variable `value_component_plasma_protein_concentration_variable_CPP` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_protein_destruction_and_formation_variable_DLP` may be invalid.\n    - Variable `value_component_protein_destruction_and_formation_variable_DLP` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_protein_destruction_and_formation_variable_CPPD` may be invalid.\n    - Variable `value_component_protein_destruction_and_formation_variable_CPPD` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_plasma_leakage_variable_VTCPL` may be invalid.\n    - Variable `value_component_plasma_leakage_variable_VTCPL` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_plasma_leakage_variable_PRCD` may be invalid.\n    - Variable `value_component_plasma_leakage_variable_PRCD` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_protein_influx_into_interstitium_variable_DPC` may be invalid.\n    - Variable `value_component_protein_influx_into_interstitium_variable_DPC` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_total_plasma_protein_variable_PRP` may be invalid.\n    - Variable `value_component_total_plasma_protein_variable_PRP` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_total_plasma_protein_variable_DPP` may be invalid.\n    - Variable `value_component_total_plasma_protein_variable_DPP` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_plasma_colloid_osmotic_pressure_variable_PPC` may be invalid.\n    - Variable `value_component_plasma_colloid_osmotic_pressure_variable_PPC` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_total_systemic_fluid_volume_variable_VTS` may be invalid.\n    - Variable `value_component_total_systemic_fluid_volume_variable_VTS` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_interstitial_fluid_volume_variable_VTS1` may be invalid.\n    - Variable `value_component_interstitial_fluid_volume_variable_VTS1` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_interstitial_fluid_volume_variable_VTS2` may be invalid.\n    - Variable `value_component_interstitial_fluid_volume_variable_VTS2` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_total_interstitial_protein_variable_TSP` may be invalid.\n    - Variable `value_component_total_interstitial_protein_variable_TSP` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_total_interstitial_protein_variable_DPI` may be invalid.\n    - Variable `value_component_total_interstitial_protein_variable_DPI` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_interstitial_protein_concentration_variable_CPI` may be invalid.\n    - Variable `value_component_interstitial_protein_concentration_variable_CPI` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_interstitial_colloid_osmotic_pressure_variable_PTCPR` may be invalid.\n    - Variable `value_component_interstitial_colloid_osmotic_pressure_variable_PTCPR` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_lymph_protein_flow_variable_DPL` may be invalid.\n    - Variable `value_component_lymph_protein_flow_variable_DPL` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_hydrostatic_pressure_of_tissue_gel_variable_CHY` may be invalid.\n    - Variable `value_component_hydrostatic_pressure_of_tissue_gel_variable_CHY` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_hydrostatic_pressure_of_tissue_gel_variable_PGH` may be invalid.\n    - Variable `value_component_hydrostatic_pressure_of_tissue_gel_variable_PGH` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_total_osmotic_pressure_of_tissue_gel_variable_POSHYL` may be invalid.\n    - Variable `value_component_total_osmotic_pressure_of_tissue_gel_variable_POSHYL` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_total_osmotic_pressure_of_tissue_gel_variable_PTC` may be invalid.\n    - Variable `value_component_total_osmotic_pressure_of_tissue_gel_variable_PTC` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_total_tissue_pressure_variable_PTT` may be invalid.\n    - Variable `value_component_total_tissue_pressure_variable_PTT` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_interstial_free_fluid_pressure_variable_PIF` may be invalid.\n    - Variable `value_component_interstial_free_fluid_pressure_variable_PIF` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_interstitial_solid_tissue_pressure_variable_PTS` may be invalid.\n    - Variable `value_component_interstitial_solid_tissue_pressure_variable_PTS` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_lymph_flow_variable_VTL` may be invalid.\n    - Variable `value_component_lymph_flow_variable_VTL` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_lymph_flow_variable_PLD1` may be invalid.\n    - Variable `value_component_lymph_flow_variable_PLD1` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_lymph_flow_variable_PLD` may be invalid.\n    - Variable `value_component_lymph_flow_variable_PLD` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_interstitial_gel_volume_variable_VG` may be invalid.\n    - Variable `value_component_interstitial_gel_volume_variable_VG` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_interstitial_free_fluid_volume_variable_VIF` may be invalid.\n    - Variable `value_component_interstitial_free_fluid_volume_variable_VIF` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameter_values_variable_CFC` may be invalid.\n    - Variable `value_component_parameter_values_variable_CFC` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameter_values_variable_TRPL` may be invalid.\n    - Variable `value_component_parameter_values_variable_TRPL` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameter_values_variable_CPR` may be invalid.\n    - Variable `value_component_parameter_values_variable_CPR` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameter_values_variable_LPDE` may be invalid.\n    - Variable `value_component_parameter_values_variable_LPDE` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameter_values_variable_PCE` may be invalid.\n    - Variable `value_component_parameter_values_variable_PCE` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameter_values_variable_PCR` may be invalid.\n    - Variable `value_component_parameter_values_variable_PCR` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameter_values_variable_LPK` may be invalid.\n    - Variable `value_component_parameter_values_variable_LPK` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameter_values_variable_LPPR` may be invalid.\n    - Variable `value_component_parameter_values_variable_LPPR` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameter_values_variable_CPK` may be invalid.\n    - Variable `value_component_parameter_values_variable_CPK` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameter_values_variable_TSSLML` may be invalid.\n    - Variable `value_component_parameter_values_variable_TSSLML` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameter_values_variable_TSSLTC` may be invalid.\n    - Variable `value_component_parameter_values_variable_TSSLTC` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameter_values_variable_HYL` may be invalid.\n    - Variable `value_component_parameter_values_variable_HYL` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameter_values_variable_CMPTSS` may be invalid.\n    - Variable `value_component_parameter_values_variable_CMPTSS` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameter_values_variable_PGHF` may be invalid.\n    - Variable `value_component_parameter_values_variable_PGHF` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameter_values_variable_GCOPF` may be invalid.\n    - Variable `value_component_parameter_values_variable_GCOPF` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameter_values_variable_VTSF` may be invalid.\n    - Variable `value_component_parameter_values_variable_VTSF` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameter_values_variable_PLDF` may be invalid.\n    - Variable `value_component_parameter_values_variable_PLDF` may be invalid.\n      - XPath could not be validated.\u001b[0m\n  warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33mThe SED document is potentially incorrect.\n  - Model `model` may be invalid.\n    - The model file `cap_dynamics_parent.cellml` may be invalid.\n      - Validation is not available for CellML 1.1 files.\n    - The changes of the model may be invalid.\n      - Change 1 may be invalid.\n        - XPath could not be validated.\n      - Change 2 may be invalid.\n        - XPath could not be validated.\n      - Change 3 may be invalid.\n        - XPath could not be validated.\n      - Change 4 may be invalid.\n        - XPath could not be validated.\n      - Change 5 may be invalid.\n        - XPath could not be validated.\n      - Change 6 may be invalid.\n        - XPath could not be validated.\n      - Change 7 may be invalid.\n        - XPath could not be validated.\n  - Data generator `data_generator_value_component_input_values_variable_VEC` may be invalid.\n    - Variable `value_component_input_values_variable_VEC` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_input_values_variable_PPD` may be invalid.\n    - Variable `value_component_input_values_variable_PPD` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_input_values_variable_RVS` may be invalid.\n    - Variable `value_component_input_values_variable_RVS` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_input_values_variable_DFP` may be invalid.\n    - Variable `value_component_input_values_variable_DFP` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_input_values_variable_VPF` may be invalid.\n    - Variable `value_component_input_values_variable_VPF` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_input_values_variable_BFN` may be invalid.\n    - Variable `value_component_input_values_variable_BFN` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_input_values_variable_PVS` may be invalid.\n    - Variable `value_component_input_values_variable_PVS` may be invalid.\n      - XPath could not be validated.\u001b[0m\n  warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33mThe COMBINE/OMEX archive may be invalid.\n  - The SED-ML file at location `simulation_0.sedml` may be invalid.\n    - Model `model` may be invalid.\n      - The changes of the model may be invalid.\n        - Change 1 may be invalid.\n          - XPath could not be validated.\n        - Change 2 may be invalid.\n          - XPath could not be validated.\n        - Change 3 may be invalid.\n          - XPath could not be validated.\n        - Change 4 may be invalid.\n          - XPath could not be validated.\n        - Change 5 may be invalid.\n          - XPath could not be validated.\n        - Change 6 may be invalid.\n          - XPath could not be validated.\n        - Change 7 may be invalid.\n          - XPath could not be validated.\n        - Change 8 may be invalid.\n          - XPath could not be validated.\n        - Change 9 may be invalid.\n          - XPath could not be validated.\n        - Change 10 may be invalid.\n          - XPath could not be validated.\n        - Change 11 may be invalid.\n          - XPath could not be validated.\n        - Change 12 may be invalid.\n          - XPath could not be validated.\n        - Change 13 may be invalid.\n          - XPath could not be validated.\n        - Change 14 may be invalid.\n          - XPath could not be validated.\n        - Change 15 may be invalid.\n          - XPath could not be validated.\n        - Change 16 may be invalid.\n          - XPath could not be validated.\n        - Change 17 may be invalid.\n          - XPath could not be validated.\n        - Change 18 may be invalid.\n          - XPath could not be validated.\n        - Change 19 may be invalid.\n          - XPath could not be validated.\n        - Change 20 may be invalid.\n          - XPath could not be validated.\n        - Change 21 may be invalid.\n          - XPath could not be validated.\n        - Change 22 may be invalid.\n          - XPath could not be validated.\n        - Change 23 may be invalid.\n          - XPath could not be validated.\n        - Change 24 may be invalid.\n          - XPath could not be validated.\n        - Change 25 may be invalid.\n          - XPath could not be validated.\n        - Change 26 may be invalid.\n          - XPath could not be validated.\n        - Change 27 may be invalid.\n          - XPath could not be validated.\n        - Change 28 may be invalid.\n          - XPath could not be validated.\n    - Data generator `data_generator_value_component_environment_variable_time` may be invalid.\n      - Variable `value_component_environment_variable_time` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_capillary_dynamics_variable_VEC` may be invalid.\n      - Variable `value_component_capillary_dynamics_variable_VEC` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_capillary_dynamics_variable_PPD` may be invalid.\n      - Variable `value_component_capillary_dynamics_variable_PPD` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_capillary_dynamics_variable_RVS` may be invalid.\n      - Variable `value_component_capillary_dynamics_variable_RVS` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_capillary_dynamics_variable_DFP` may be invalid.\n      - Variable `value_component_capillary_dynamics_variable_DFP` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_capillary_dynamics_variable_VPF` may be invalid.\n      - Variable `value_component_capillary_dynamics_variable_VPF` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_capillary_dynamics_variable_BFN` may be invalid.\n      - Variable `value_component_capillary_dynamics_variable_BFN` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_capillary_dynamics_variable_PVS` may be invalid.\n      - Variable `value_component_capillary_dynamics_variable_PVS` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_capillary_pressure_variable_PC` may be invalid.\n      - Variable `value_component_capillary_pressure_variable_PC` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_rate_of_fluid_out_of_capillaries_variable_VTC` may be invalid.\n      - Variable `value_component_rate_of_fluid_out_of_capillaries_variable_VTC` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_plasma_volume_variable_VP` may be invalid.\n      - Variable `value_component_plasma_volume_variable_VP` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_plasma_volume_variable_VPD` may be invalid.\n      - Variable `value_component_plasma_volume_variable_VPD` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_plasma_protein_concentration_variable_CPP` may be invalid.\n      - Variable `value_component_plasma_protein_concentration_variable_CPP` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_protein_destruction_and_formation_variable_DLP` may be invalid.\n      - Variable `value_component_protein_destruction_and_formation_variable_DLP` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_protein_destruction_and_formation_variable_CPPD` may be invalid.\n      - Variable `value_component_protein_destruction_and_formation_variable_CPPD` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_plasma_leakage_variable_VTCPL` may be invalid.\n      - Variable `value_component_plasma_leakage_variable_VTCPL` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_plasma_leakage_variable_PRCD` may be invalid.\n      - Variable `value_component_plasma_leakage_variable_PRCD` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_protein_influx_into_interstitium_variable_DPC` may be invalid.\n      - Variable `value_component_protein_influx_into_interstitium_variable_DPC` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_total_plasma_protein_variable_PRP` may be invalid.\n      - Variable `value_component_total_plasma_protein_variable_PRP` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_total_plasma_protein_variable_DPP` may be invalid.\n      - Variable `value_component_total_plasma_protein_variable_DPP` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_plasma_colloid_osmotic_pressure_variable_PPC` may be invalid.\n      - Variable `value_component_plasma_colloid_osmotic_pressure_variable_PPC` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_total_systemic_fluid_volume_variable_VTS` may be invalid.\n      - Variable `value_component_total_systemic_fluid_volume_variable_VTS` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_interstitial_fluid_volume_variable_VTS1` may be invalid.\n      - Variable `value_component_interstitial_fluid_volume_variable_VTS1` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_interstitial_fluid_volume_variable_VTS2` may be invalid.\n      - Variable `value_component_interstitial_fluid_volume_variable_VTS2` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_total_interstitial_protein_variable_TSP` may be invalid.\n      - Variable `value_component_total_interstitial_protein_variable_TSP` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_total_interstitial_protein_variable_DPI` may be invalid.\n      - Variable `value_component_total_interstitial_protein_variable_DPI` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_interstitial_protein_concentration_variable_CPI` may be invalid.\n      - Variable `value_component_interstitial_protein_concentration_variable_CPI` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_interstitial_colloid_osmotic_pressure_variable_PTCPR` may be invalid.\n      - Variable `value_component_interstitial_colloid_osmotic_pressure_variable_PTCPR` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_lymph_protein_flow_variable_DPL` may be invalid.\n      - Variable `value_component_lymph_protein_flow_variable_DPL` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_hydrostatic_pressure_of_tissue_gel_variable_CHY` may be invalid.\n      - Variable `value_component_hydrostatic_pressure_of_tissue_gel_variable_CHY` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_hydrostatic_pressure_of_tissue_gel_variable_PGH` may be invalid.\n      - Variable `value_component_hydrostatic_pressure_of_tissue_gel_variable_PGH` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_total_osmotic_pressure_of_tissue_gel_variable_POSHYL` may be invalid.\n      - Variable `value_component_total_osmotic_pressure_of_tissue_gel_variable_POSHYL` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_total_osmotic_pressure_of_tissue_gel_variable_PTC` may be invalid.\n      - Variable `value_component_total_osmotic_pressure_of_tissue_gel_variable_PTC` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_total_tissue_pressure_variable_PTT` may be invalid.\n      - Variable `value_component_total_tissue_pressure_variable_PTT` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_interstial_free_fluid_pressure_variable_PIF` may be invalid.\n      - Variable `value_component_interstial_free_fluid_pressure_variable_PIF` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_interstitial_solid_tissue_pressure_variable_PTS` may be invalid.\n      - Variable `value_component_interstitial_solid_tissue_pressure_variable_PTS` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_lymph_flow_variable_VTL` may be invalid.\n      - Variable `value_component_lymph_flow_variable_VTL` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_lymph_flow_variable_PLD1` may be invalid.\n      - Variable `value_component_lymph_flow_variable_PLD1` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_lymph_flow_variable_PLD` may be invalid.\n      - Variable `value_component_lymph_flow_variable_PLD` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_interstitial_gel_volume_variable_VG` may be invalid.\n      - Variable `value_component_interstitial_gel_volume_variable_VG` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_interstitial_free_fluid_volume_variable_VIF` may be invalid.\n      - Variable `value_component_interstitial_free_fluid_volume_variable_VIF` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameter_values_variable_CFC` may be invalid.\n      - Variable `value_component_parameter_values_variable_CFC` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameter_values_variable_TRPL` may be invalid.\n      - Variable `value_component_parameter_values_variable_TRPL` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameter_values_variable_CPR` may be invalid.\n      - Variable `value_component_parameter_values_variable_CPR` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameter_values_variable_LPDE` may be invalid.\n      - Variable `value_component_parameter_values_variable_LPDE` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameter_values_variable_PCE` may be invalid.\n      - Variable `value_component_parameter_values_variable_PCE` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameter_values_variable_PCR` may be invalid.\n      - Variable `value_component_parameter_values_variable_PCR` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameter_values_variable_LPK` may be invalid.\n      - Variable `value_component_parameter_values_variable_LPK` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameter_values_variable_LPPR` may be invalid.\n      - Variable `value_component_parameter_values_variable_LPPR` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameter_values_variable_CPK` may be invalid.\n      - Variable `value_component_parameter_values_variable_CPK` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameter_values_variable_TSSLML` may be invalid.\n      - Variable `value_component_parameter_values_variable_TSSLML` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameter_values_variable_TSSLTC` may be invalid.\n      - Variable `value_component_parameter_values_variable_TSSLTC` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameter_values_variable_HYL` may be invalid.\n      - Variable `value_component_parameter_values_variable_HYL` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameter_values_variable_CMPTSS` may be invalid.\n      - Variable `value_component_parameter_values_variable_CMPTSS` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameter_values_variable_PGHF` may be invalid.\n      - Variable `value_component_parameter_values_variable_PGHF` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameter_values_variable_GCOPF` may be invalid.\n      - Variable `value_component_parameter_values_variable_GCOPF` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameter_values_variable_VTSF` may be invalid.\n      - Variable `value_component_parameter_values_variable_VTSF` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameter_values_variable_PLDF` may be invalid.\n      - Variable `value_component_parameter_values_variable_PLDF` may be invalid.\n        - XPath could not be validated.\n  - The SED-ML file at location `simulation_1.sedml` may be invalid.\n    - Model `model` may be invalid.\n      - The model file `cap_dynamics_parent.cellml` may be invalid.\n        - Validation is not available for CellML 1.1 files.\n      - The changes of the model may be invalid.\n        - Change 1 may be invalid.\n          - XPath could not be validated.\n        - Change 2 may be invalid.\n          - XPath could not be validated.\n        - Change 3 may be invalid.\n          - XPath could not be validated.\n        - Change 4 may be invalid.\n          - XPath could not be validated.\n        - Change 5 may be invalid.\n          - XPath could not be validated.\n        - Change 6 may be invalid.\n          - XPath could not be validated.\n        - Change 7 may be invalid.\n          - XPath could not be validated.\n    - Data generator `data_generator_value_component_input_values_variable_VEC` may be invalid.\n      - Variable `value_component_input_values_variable_VEC` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_input_values_variable_PPD` may be invalid.\n      - Variable `value_component_input_values_variable_PPD` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_input_values_variable_RVS` may be invalid.\n      - Variable `value_component_input_values_variable_RVS` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_input_values_variable_DFP` may be invalid.\n      - Variable `value_component_input_values_variable_DFP` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_input_values_variable_VPF` may be invalid.\n      - Variable `value_component_input_values_variable_VPF` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_input_values_variable_BFN` may be invalid.\n      - Variable `value_component_input_values_variable_BFN` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_input_values_variable_PVS` may be invalid.\n      - Variable `value_component_input_values_variable_PVS` may be invalid.\n        - XPath could not be validated.\u001b[0m\n  warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33mThe SED document is potentially incorrect.\n  - Model `model` may be invalid.\n    - The changes of the model may be invalid.\n      - Change 1 may be invalid.\n        - XPath could not be validated.\n      - Change 2 may be invalid.\n        - XPath could not be validated.\n      - Change 3 may be invalid.\n        - XPath could not be validated.\n      - Change 4 may be invalid.\n        - XPath could not be validated.\n      - Change 5 may be invalid.\n        - XPath could not be validated.\n      - Change 6 may be invalid.\n        - XPath could not be validated.\n      - Change 7 may be invalid.\n        - XPath could not be validated.\n  - Data generator `data_generator_value_component_input_values_variable_VEC` may be invalid.\n    - Variable `value_component_input_values_variable_VEC` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_input_values_variable_PPD` may be invalid.\n    - Variable `value_component_input_values_variable_PPD` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_input_values_variable_RVS` may be invalid.\n    - Variable `value_component_input_values_variable_RVS` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_input_values_variable_DFP` may be invalid.\n    - Variable `value_component_input_values_variable_DFP` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_input_values_variable_VPF` may be invalid.\n    - Variable `value_component_input_values_variable_VPF` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_input_values_variable_BFN` may be invalid.\n    - Variable `value_component_input_values_variable_BFN` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_input_values_variable_PVS` may be invalid.\n    - Variable `value_component_input_values_variable_PVS` may be invalid.\n      - XPath could not be validated.\u001b[0m\n  warnings.warn(termcolor.colored(message, Colors.warning.value), category)\nArchive contains 2 SED-ML documents with 2 models, 2 simulations, 2 tasks, 2 reports, and 0 plots:\n  simulation_0.sedml:\n    Tasks (1):\n      task\n    Reports (1):\n      report: 58 data sets\n  simulation_1.sedml:\n    Tasks (1):\n      task\n    Reports (1):\n      report: 7 data sets\n\nExecuting SED-ML file 1: simulation_0.sedml ...\nExecuting SED-ML file 2: simulation_1.sedml ...\n\nBundling outputs ...\nCleaning up ...\n\n============= SUMMARY =============\nExecuted 2 SED documents:\n  SED documents (2):\n    Succeeded: 2\n    Skipped: 0\n    Failed: 0\n  Tasks (2):\n    Succeeded: 2\n    Skipped: 0\n    Failed: 0\n  Outputs (2):\n    Succeeded: 2\n    Skipped: 0\n    Failed: 0\n\n\n\u001b[0;36m===================================================== Saving log ====================================================\u001b[0m\nCompleted 40.6 KiB/40.6 KiB (408.2 KiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/rawLog.txt\nCompleted 58.1 KiB/58.1 KiB (359.0 KiB/s) with 1 file(s) remaining\rupload: outputs/log.yml to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/outputs/log.yml\n\n\u001b[0;36m================================================== Zipping outputs ==================================================\u001b[0m\n  adding: outputs/ (stored 0%)\n  adding: outputs/log.yml (deflated 93%)\n  adding: outputs/reports.h5 (deflated 84%)\n  adding: rawLog.txt (deflated 93%)\n\n\u001b[0;36m=================================================== Saving outputs ==================================================\u001b[0m\nCompleted 45.5 KiB/45.5 KiB (337.1 KiB/s) with 1 file(s) remaining\rupload: outputs/reports.h5 to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/outputs/reports.h5\nCompleted 14.9 KiB/56.4 KiB (137.5 KiB/s) with 2 file(s) remaining\rupload: ./output.zip to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/output.zip\nCompleted 14.9 KiB/56.4 KiB (137.5 KiB/s) with 1 file(s) remaining\rCompleted 56.4 KiB/56.4 KiB (232.6 KiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/rawLog.txt\n\n\u001b[0;36m====================================== Saving contents of COMBINE/OMEX archive ======================================\u001b[0m\nArchive:  archive.omex\n  inflating: contents/capillary_dynamics.png  \n  inflating: contents/cap_dynamics.cellml  \n  inflating: contents/guyton_capillary_dynamics_2008.cellml  \n  inflating: contents/full_model.png  \n  inflating: contents/environment.cellml  \n  inflating: contents/units.cellml   \n  inflating: contents/parameters.cellml  \n  inflating: contents/cap_dynamics_parent.cellml  \n  inflating: contents/simulation_0.sedml  \n  inflating: contents/simulation_1.sedml  \n  inflating: contents/metadata.rdf   \n  inflating: contents/manifest.xml   \nCompleted 256.0 KiB/1.0 MiB (3.1 MiB/s) with 12 file(s) remaining\rCompleted 512.0 KiB/1.0 MiB (4.5 MiB/s) with 12 file(s) remaining\rCompleted 525.0 KiB/1.0 MiB (4.1 MiB/s) with 12 file(s) remaining\rupload: contents/cap_dynamics_parent.cellml to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/contents/cap_dynamics_parent.cellml\nCompleted 525.0 KiB/1.0 MiB (4.1 MiB/s) with 11 file(s) remaining\rCompleted 525.6 KiB/1.0 MiB (3.6 MiB/s) with 11 file(s) remaining\rupload: contents/environment.cellml to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/contents/environment.cellml\nCompleted 525.6 KiB/1.0 MiB (3.6 MiB/s) with 10 file(s) remaining\rCompleted 575.3 KiB/1.0 MiB (3.6 MiB/s) with 10 file(s) remaining\rupload: contents/capillary_dynamics.png to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/contents/capillary_dynamics.png\nCompleted 575.3 KiB/1.0 MiB (3.6 MiB/s) with 9 file(s) remaining\rCompleted 596.1 KiB/1.0 MiB (3.6 MiB/s) with 9 file(s) remaining\rupload: contents/metadata.rdf to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/contents/metadata.rdf\nCompleted 596.1 KiB/1.0 MiB (3.6 MiB/s) with 8 file(s) remaining\rCompleted 725.2 KiB/1.0 MiB (4.2 MiB/s) with 8 file(s) remaining\rupload: contents/full_model.png to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/contents/full_model.png\nCompleted 725.2 KiB/1.0 MiB (4.2 MiB/s) with 7 file(s) remaining\rCompleted 777.9 KiB/1.0 MiB (4.4 MiB/s) with 7 file(s) remaining\rupload: contents/parameters.cellml to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/contents/parameters.cellml\nCompleted 777.9 KiB/1.0 MiB (4.4 MiB/s) with 6 file(s) remaining\rCompleted 870.8 KiB/1.0 MiB (4.0 MiB/s) with 6 file(s) remaining\rupload: contents/guyton_capillary_dynamics_2008.cellml to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/contents/guyton_capillary_dynamics_2008.cellml\nCompleted 870.8 KiB/1.0 MiB (4.0 MiB/s) with 5 file(s) remaining\rCompleted 872.2 KiB/1.0 MiB (4.0 MiB/s) with 5 file(s) remaining\rupload: contents/manifest.xml to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/contents/manifest.xml\nCompleted 872.2 KiB/1.0 MiB (4.0 MiB/s) with 4 file(s) remaining\rCompleted 935.4 KiB/1.0 MiB (4.2 MiB/s) with 4 file(s) remaining\rupload: contents/simulation_0.sedml to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/contents/simulation_0.sedml\nCompleted 935.4 KiB/1.0 MiB (4.2 MiB/s) with 3 file(s) remaining\rCompleted 940.5 KiB/1.0 MiB (4.0 MiB/s) with 3 file(s) remaining\rupload: contents/units.cellml to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/contents/units.cellml\nCompleted 940.5 KiB/1.0 MiB (4.0 MiB/s) with 2 file(s) remaining\rCompleted 948.8 KiB/1.0 MiB (3.9 MiB/s) with 2 file(s) remaining\rupload: contents/simulation_1.sedml to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/contents/simulation_1.sedml\nCompleted 948.8 KiB/1.0 MiB (3.9 MiB/s) with 1 file(s) remaining\rCompleted 1.0 MiB/1.0 MiB (3.8 MiB/s) with 1 file(s) remaining  \rupload: contents/cap_dynamics.cellml to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/contents/cap_dynamics.cellml\n\n\u001b[0;36m==================================================== Updating log ===================================================\u001b[0m\nCompleted 45.9 KiB/45.9 KiB (307.7 KiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/6261751f90c6a19595578a49/rawLog.txt\n\n\u001b[0;36m=================================================== Saving results ==================================================\u001b[0m\ncreating group /simulation_0.sedml\ncreating dataset /simulation_0.sedml/report, shape: (58, 11), type: float64\ndataset created, uuid: d-ff860035-698ea4bd-33da-583ef3-1e0bea, chunk_size: (58, 11)\ncreating group /simulation_1.sedml\ncreating dataset /simulation_1.sedml/report, shape: (7, 11), type: float64\ndataset created, uuid: d-ff860035-698ea4bd-5504-4a1047-69887b, chunk_size: (7, 11)\ncreating attribute combineArchiveLocation in /simulation_0.sedml\ncreating attribute uri in /simulation_0.sedml\ncreating attribute _type in /simulation_0.sedml/report\ncreating attribute sedmlDataSetDataTypes in /simulation_0.sedml/report\ncreating attribute sedmlDataSetIds in /simulation_0.sedml/report\ncreating attribute sedmlDataSetLabels in /simulation_0.sedml/report\ncreating attribute sedmlDataSetNames in /simulation_0.sedml/report\ncreating attribute sedmlDataSetShapes in /simulation_0.sedml/report\ncreating attribute sedmlId in /simulation_0.sedml/report\ncreating attribute uri in /simulation_0.sedml/report\ncreating attribute combineArchiveLocation in /simulation_1.sedml\ncreating attribute uri in /simulation_1.sedml\ncreating attribute _type in /simulation_1.sedml/report\ncreating attribute sedmlDataSetDataTypes in /simulation_1.sedml/report\ncreating attribute sedmlDataSetIds in /simulation_1.sedml/report\ncreating attribute sedmlDataSetLabels in /simulation_1.sedml/report\ncreating attribute sedmlDataSetNames in /simulation_1.sedml/report\ncreating attribute sedmlDataSetShapes in /simulation_1.sedml/report\ncreating attribute sedmlId in /simulation_1.sedml/report\ncreating attribute uri in /simulation_1.sedml/report\ncreate_links: /\ngot link: simulation_0.sedml\ngot link: simulation_1.sedml\ncreate_links: /simulation_0.sedml\ngot link: report\ncreate_links: /simulation_1.sedml\ngot link: report\nwrite_dataset src: /simulation_0.sedml/report to tgt: /simulation_0.sedml/report, shape: (58, 11), type: float64\niterating over chunks for /simulation_0.sedml/report\nwriting dataset data for slice: (slice(0, 58, 1), slice(0, 11, 1))\ndone with dataload for /simulation_0.sedml/report\nwrite_dataset src: /simulation_1.sedml/report to tgt: /simulation_1.sedml/report, shape: (7, 11), type: float64\niterating over chunks for /simulation_1.sedml/report\nwriting dataset data for slice: (slice(0, 7, 1), slice(0, 11, 1))\ndone with dataload for /simulation_1.sedml/report\nload_file complete\nFile outputs/reports.h5 uploaded to domain: /results/6261751f90c6a19595578a49\n\n\u001b[0;36m================================================== Saving final log =================================================\u001b[0m\n\n\u001b[0;36m=========================================== Post-processing simulation run ==========================================\u001b[0m\n\u001b[0;32mProcess the manifest file in the COMBINE archive ... succeeded.\nRead the manifest and post the files to the API ... succeeded.\nCreate thumbnails from the images specified in the manifest ... succeeded.\nPost thumbnails to the API ... succeeded.\nRetrieve the logs of the simulation run ... succeeded.\nPost the logs to the API ... succeeded.\nProcess the SED-ML file in the COMBINE archive ... succeeded.\nPost the SED-ML file to the API ... succeeded.\nProcess the metadata in the COMBINE archive ... succeeded.\nPost the metadata to the API ... succeeded.\nProcess and upload the outputs of the simulation run ... succeeded.\u001b[0m\n\u001b[0;36m================================ Run complete. Thank you for using runBioSimulations! ===============================\u001b[0m","duration":2.396901,"sedDocuments":[{"location":"simulation_0.sedml","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"  Found 1 tasks and 1 outputs:\n    Tasks:\n      `task`\n    Outputs:\n      `report`\n  Executing task 1: `task`\n    Executing simulation ... \u001b[34msucceeded\u001b[0m\n    Generating 1 outputs ...\n      Generating output 1: `report` ... \u001b[34msucceeded\u001b[0m\n\n  Executed 1 tasks and 1 outputs:\n    Tasks:\n      Succeeded: 1\n      Skipped: 0\n      Failed: 0\n    Outputs:\n      Succeeded: 1\n      Skipped: 0\n      Failed: 0\n","duration":0.929812,"tasks":[{"id":"task","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33m- Variable `value_component_protein_influx_into_interstitium_variable_DPC` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_lymph_flow_variable_PLD` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameter_values_variable_CFC` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_capillary_dynamics_variable_BFN` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_capillary_dynamics_variable_VPF` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_plasma_leakage_variable_VTCPL` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_interstitial_free_fluid_volume_variable_VIF` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_protein_destruction_and_formation_variable_DLP` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_total_systemic_fluid_volume_variable_VTS` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameter_values_variable_CPR` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameter_values_variable_TRPL` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_hydrostatic_pressure_of_tissue_gel_variable_PGH` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameter_values_variable_PCE` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_plasma_leakage_variable_PRCD` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameter_values_variable_CMPTSS` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_protein_destruction_and_formation_variable_CPPD` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_interstitial_solid_tissue_pressure_variable_PTS` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_interstial_free_fluid_pressure_variable_PIF` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_plasma_protein_concentration_variable_CPP` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_total_plasma_protein_variable_PRP` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_hydrostatic_pressure_of_tissue_gel_variable_CHY` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_environment_variable_time` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameter_values_variable_LPPR` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameter_values_variable_PCR` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_interstitial_protein_concentration_variable_CPI` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_total_interstitial_protein_variable_DPI` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_capillary_pressure_variable_PC` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameter_values_variable_PLDF` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_total_interstitial_protein_variable_TSP` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameter_values_variable_LPK` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameter_values_variable_GCOPF` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_capillary_dynamics_variable_RVS` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameter_values_variable_TSSLTC` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_capillary_dynamics_variable_PPD` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_plasma_colloid_osmotic_pressure_variable_PPC` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_rate_of_fluid_out_of_capillaries_variable_VTC` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameter_values_variable_CPK` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_capillary_dynamics_variable_VEC` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_interstitial_gel_volume_variable_VG` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_lymph_flow_variable_VTL` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_lymph_flow_variable_PLD1` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_interstitial_colloid_osmotic_pressure_variable_PTCPR` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_total_tissue_pressure_variable_PTT` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_capillary_dynamics_variable_PVS` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_interstitial_fluid_volume_variable_VTS1` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_total_osmotic_pressure_of_tissue_gel_variable_PTC` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_plasma_volume_variable_VPD` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_total_plasma_protein_variable_DPP` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameter_values_variable_VTSF` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_plasma_volume_variable_VP` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_total_osmotic_pressure_of_tissue_gel_variable_POSHYL` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_lymph_protein_flow_variable_DPL` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_interstitial_fluid_volume_variable_VTS2` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameter_values_variable_HYL` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameter_values_variable_TSSLML` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameter_values_variable_PGHF` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_capillary_dynamics_variable_DFP` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameter_values_variable_LPDE` may be invalid.\n  - XPath could not be validated.\u001b[0m\n  warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33mThe SED document is potentially incorrect.\n  - The following tasks do not contribute to outputs:\n    - `repeatedTask`\n    - `task1`\u001b[0m\n  warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n","duration":0.750061,"algorithm":"KISAO_0000019","simulatorDetails":[{"key":"method","value":"OpenCOR.SimulationSupport.Simulation.run"},{"key":"algorithmParameters","value":[]}]}],"outputs":[{"id":"report","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.028603,"dataSets":[{"id":"data_set_value_component_environment_variable_time","status":"SUCCEEDED"},{"id":"data_set_value_component_capillary_dynamics_variable_VEC","status":"SUCCEEDED"},{"id":"data_set_value_component_capillary_dynamics_variable_PPD","status":"SUCCEEDED"},{"id":"data_set_value_component_capillary_dynamics_variable_RVS","status":"SUCCEEDED"},{"id":"data_set_value_component_capillary_dynamics_variable_DFP","status":"SUCCEEDED"},{"id":"data_set_value_component_capillary_dynamics_variable_VPF","status":"SUCCEEDED"},{"id":"data_set_value_component_capillary_dynamics_variable_BFN","status":"SUCCEEDED"},{"id":"data_set_value_component_capillary_dynamics_variable_PVS","status":"SUCCEEDED"},{"id":"data_set_value_component_capillary_pressure_variable_PC","status":"SUCCEEDED"},{"id":"data_set_value_component_rate_of_fluid_out_of_capillaries_variable_VTC","status":"SUCCEEDED"},{"id":"data_set_value_component_plasma_volume_variable_VP","status":"SUCCEEDED"},{"id":"data_set_value_component_plasma_volume_variable_VPD","status":"SUCCEEDED"},{"id":"data_set_value_component_plasma_protein_concentration_variable_CPP","status":"SUCCEEDED"},{"id":"data_set_value_component_protein_destruction_and_formation_variable_DLP","status":"SUCCEEDED"},{"id":"data_set_value_component_protein_destruction_and_formation_variable_CPPD","status":"SUCCEEDED"},{"id":"data_set_value_component_plasma_leakage_variable_VTCPL","status":"SUCCEEDED"},{"id":"data_set_value_component_plasma_leakage_variable_PRCD","status":"SUCCEEDED"},{"id":"data_set_value_component_protein_influx_into_interstitium_variable_DPC","status":"SUCCEEDED"},{"id":"data_set_value_component_total_plasma_protein_variable_PRP","status":"SUCCEEDED"},{"id":"data_set_value_component_total_plasma_protein_variable_DPP","status":"SUCCEEDED"},{"id":"data_set_value_component_plasma_colloid_osmotic_pressure_variable_PPC","status":"SUCCEEDED"},{"id":"data_set_value_component_total_systemic_fluid_volume_variable_VTS","status":"SUCCEEDED"},{"id":"data_set_value_component_interstitial_fluid_volume_variable_VTS1","status":"SUCCEEDED"},{"id":"data_set_value_component_interstitial_fluid_volume_variable_VTS2","status":"SUCCEEDED"},{"id":"data_set_value_component_total_interstitial_protein_variable_TSP","status":"SUCCEEDED"},{"id":"data_set_value_component_total_interstitial_protein_variable_DPI","status":"SUCCEEDED"},{"id":"data_set_value_component_interstitial_protein_concentration_variable_CPI","status":"SUCCEEDED"},{"id":"data_set_value_component_interstitial_colloid_osmotic_pressure_variable_PTCPR","status":"SUCCEEDED"},{"id":"data_set_value_component_lymph_protein_flow_variable_DPL","status":"SUCCEEDED"},{"id":"data_set_value_component_hydrostatic_pressure_of_tissue_gel_variable_CHY","status":"SUCCEEDED"},{"id":"data_set_value_component_hydrostatic_pressure_of_tissue_gel_variable_PGH","status":"SUCCEEDED"},{"id":"data_set_value_component_total_osmotic_pressure_of_tissue_gel_variable_POSHYL","status":"SUCCEEDED"},{"id":"data_set_value_component_total_osmotic_pressure_of_tissue_gel_variable_PTC","status":"SUCCEEDED"},{"id":"data_set_value_component_total_tissue_pressure_variable_PTT","status":"SUCCEEDED"},{"id":"data_set_value_component_interstial_free_fluid_pressure_variable_PIF","status":"SUCCEEDED"},{"id":"data_set_value_component_interstitial_solid_tissue_pressure_variable_PTS","status":"SUCCEEDED"},{"id":"data_set_value_component_lymph_flow_variable_VTL","status":"SUCCEEDED"},{"id":"data_set_value_component_lymph_flow_variable_PLD1","status":"SUCCEEDED"},{"id":"data_set_value_component_lymph_flow_variable_PLD","status":"SUCCEEDED"},{"id":"data_set_value_component_interstitial_gel_volume_variable_VG","status":"SUCCEEDED"},{"id":"data_set_value_component_interstitial_free_fluid_volume_variable_VIF","status":"SUCCEEDED"},{"id":"data_set_value_component_parameter_values_variable_CFC","status":"SUCCEEDED"},{"id":"data_set_value_component_parameter_values_variable_TRPL","status":"SUCCEEDED"},{"id":"data_set_value_component_parameter_values_variable_CPR","status":"SUCCEEDED"},{"id":"data_set_value_component_parameter_values_variable_LPDE","status":"SUCCEEDED"},{"id":"data_set_value_component_parameter_values_variable_PCE","status":"SUCCEEDED"},{"id":"data_set_value_component_parameter_values_variable_PCR","status":"SUCCEEDED"},{"id":"data_set_value_component_parameter_values_variable_LPK","status":"SUCCEEDED"},{"id":"data_set_value_component_parameter_values_variable_LPPR","status":"SUCCEEDED"},{"id":"data_set_value_component_parameter_values_variable_CPK","status":"SUCCEEDED"},{"id":"data_set_value_component_parameter_values_variable_TSSLML","status":"SUCCEEDED"},{"id":"data_set_value_component_parameter_values_variable_TSSLTC","status":"SUCCEEDED"},{"id":"data_set_value_component_parameter_values_variable_HYL","status":"SUCCEEDED"},{"id":"data_set_value_component_parameter_values_variable_CMPTSS","status":"SUCCEEDED"},{"id":"data_set_value_component_parameter_values_variable_PGHF","status":"SUCCEEDED"},{"id":"data_set_value_component_parameter_values_variable_GCOPF","status":"SUCCEEDED"},{"id":"data_set_value_component_parameter_values_variable_VTSF","status":"SUCCEEDED"},{"id":"data_set_value_component_parameter_values_variable_PLDF","status":"SUCCEEDED"}]}]},{"location":"simulation_1.sedml","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"  Found 1 tasks and 1 outputs:\n    Tasks:\n      `task`\n    Outputs:\n      `report`\n  Executing task 1: `task`\n    Executing simulation ... \u001b[34msucceeded\u001b[0m\n    Generating 1 outputs ...\n      Generating output 1: `report` ... \u001b[34msucceeded\u001b[0m\n\n  Executed 1 tasks and 1 outputs:\n    Tasks:\n      Succeeded: 1\n      Skipped: 0\n      Failed: 0\n    Outputs:\n      Succeeded: 1\n      Skipped: 0\n      Failed: 0\n","duration":0.73208,"tasks":[{"id":"task","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33m- Variable `value_component_input_values_variable_VEC` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_input_values_variable_BFN` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_input_values_variable_PVS` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_input_values_variable_RVS` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_input_values_variable_PPD` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_input_values_variable_DFP` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_input_values_variable_VPF` may be invalid.\n  - XPath could not be validated.\u001b[0m\n  warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n","duration":0.582557,"algorithm":"KISAO_0000019","simulatorDetails":[{"key":"method","value":"OpenCOR.SimulationSupport.Simulation.run"},{"key":"algorithmParameters","value":[]}]}],"outputs":[{"id":"report","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.013027,"dataSets":[{"id":"data_set_value_component_input_values_variable_VEC","status":"SUCCEEDED"},{"id":"data_set_value_component_input_values_variable_PPD","status":"SUCCEEDED"},{"id":"data_set_value_component_input_values_variable_RVS","status":"SUCCEEDED"},{"id":"data_set_value_component_input_values_variable_DFP","status":"SUCCEEDED"},{"id":"data_set_value_component_input_values_variable_VPF","status":"SUCCEEDED"},{"id":"data_set_value_component_input_values_variable_BFN","status":"SUCCEEDED"},{"id":"data_set_value_component_input_values_variable_PVS","status":"SUCCEEDED"}]}]}]}