{"status":"SUCCEEDED","exception":null,"skipReason":null,"output":"\u001b[0;36mThank you for using runBioSimulations!\u001b[0m\n\n\u001b[0;36m================================================ Loading Singularity ================================================\u001b[0m\n\n\u001b[0;36m=================================================== Set up storage ==================================================\u001b[0m\n\n\u001b[0;36m========================================== Downloading COMBINE/OMEX archive =========================================\u001b[0m\n % Total % Received % Xferd Average Speed Time Time Time Current\n Dload Upload Total Spent Left Speed\n\r 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0\r100 139 100 139 0 0 437 0 --:--:-- --:--:-- --:--:-- 438\n\r100 2017k 100 2017k 0 0 4287k 0 --:--:-- --:--:-- --:--:-- 4287k\n\n\u001b[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================\u001b[0m\nINFO: Using cached SIF image\nTraceback (most recent call last):\n File \"/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py\", line 247, in \n if not update_paths(args.path, args.scripts_dir, args.clear_args, args.extra_args):\n File \"/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py\", line 213, in update_paths\n update_scripts(scripts_dir, new_path, clear_args, extra_args)\n File \"/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py\", line 125, in update_scripts\n update_script(os.path.join(bin_dir, fn), new_path, clear_args, extra_args)\n File \"/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py\", line 118, in update_script\n with open(script_filename, 'w') as f:\nOSError: [Errno 30] Read-only file system: '/home/opencor/OpenCOR/bin/../python/bin/biosimulators-utils'\n/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33mCOMBINE/OMEX archive may be invalid.\n - The manifest does not include its parent COMBINE/OMEX archive. Manifests should include their parent COMBINE/OMEX archives.\u001b[0m\n warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33mThe SED document is potentially incorrect.\n - Model `model` may be invalid.\n - The changes of the model may be invalid.\n - Change 1 may be invalid.\n - XPath could not be validated.\n - Change 2 may be invalid.\n - XPath could not be validated.\n - Change 3 may be invalid.\n - XPath could not be validated.\n - Change 4 may be invalid.\n - XPath could not be validated.\n - Change 5 may be invalid.\n - XPath could not be validated.\n - Change 6 may be invalid.\n - XPath could not be validated.\n - Change 7 may be invalid.\n - XPath could not be validated.\n - Change 8 may be invalid.\n - XPath could not be validated.\n - Change 9 may be invalid.\n - XPath could not be validated.\n - Change 10 may be invalid.\n - XPath could not be validated.\n - Change 11 may be invalid.\n - XPath could not be validated.\n - Change 12 may be invalid.\n - XPath could not be validated.\n - Change 13 may be invalid.\n - XPath could not be validated.\n - Change 14 may be invalid.\n - XPath could not be validated.\n - Change 15 may be invalid.\n - XPath could not be validated.\n - Change 16 may be invalid.\n - XPath could not be validated.\n - Change 17 may be invalid.\n - XPath could not be validated.\n - Change 18 may be invalid.\n - XPath could not be validated.\n - Change 19 may be invalid.\n - XPath could not be validated.\n - Change 20 may be invalid.\n - XPath could not be validated.\n - Change 21 may be invalid.\n - XPath could not be validated.\n - Change 22 may be invalid.\n - XPath could not be validated.\n - Change 23 may be invalid.\n - XPath could not be validated.\n - Change 24 may be invalid.\n - XPath could not be validated.\n - Change 25 may be invalid.\n - XPath could not be validated.\n - Change 26 may be invalid.\n - XPath could not be validated.\n - Change 27 may be invalid.\n - XPath could not be validated.\n - Change 28 may be invalid.\n - XPath could not be validated.\n - Change 29 may be invalid.\n - XPath could not be validated.\n - Change 30 may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_environment_variable_time` may be invalid.\n - Variable `value_component_environment_variable_time` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_F_c_dopa` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_c_dopa` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_A_dopa_c` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_A_dopa_c` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_ka_c_dopa` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_ka_c_dopa` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_F_G` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_G` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_F_H` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_H` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_CL_H` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_CL_H` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_Q` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_Q` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_f_H` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_f_H` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_L_dopa_variable_C_dopa_c` may be invalid.\n - Variable `value_component_body_compartment_L_dopa_variable_C_dopa_c` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_L_dopa_variable_V_dopa` may be invalid.\n - Variable `value_component_body_compartment_L_dopa_variable_V_dopa` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_3_OMD_variable_C_OMD_c` may be invalid.\n - Variable `value_component_body_compartment_3_OMD_variable_C_OMD_c` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_3_OMD_variable_CL_OMD_c` may be invalid.\n - Variable `value_component_body_compartment_3_OMD_variable_CL_OMD_c` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_3_OMD_variable_V_OMD_c` may be invalid.\n - Variable `value_component_body_compartment_3_OMD_variable_V_OMD_c` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_dopa` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_dopa` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_dopa_0` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_dopa_0` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_COMT` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_COMT` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_AADC` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_AADC` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_AADC0` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_AADC0` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_REST` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_REST` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_ki` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_ki` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_benserazide_variable_A_bens` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_benserazide_variable_A_bens` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_benserazide_variable_ka_B` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_benserazide_variable_ka_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_benserazide_variable_F_B` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_benserazide_variable_F_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_benserazide_variable_C_bens_central` may be invalid.\n - Variable `value_component_central_compartment_benserazide_variable_C_bens_central` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_benserazide_variable_V1_B` may be invalid.\n - Variable `value_component_central_compartment_benserazide_variable_V1_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_benserazide_variable_CLd_B` may be invalid.\n - Variable `value_component_central_compartment_benserazide_variable_CLd_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_peripheral_compartment_benserazide_variable_C_bens_peripheral` may be invalid.\n - Variable `value_component_peripheral_compartment_benserazide_variable_C_bens_peripheral` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_peripheral_compartment_benserazide_variable_V2_B` may be invalid.\n - Variable `value_component_peripheral_compartment_benserazide_variable_V2_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_benserazide_clearance_variable_CL_bens_total` may be invalid.\n - Variable `value_component_benserazide_clearance_variable_CL_bens_total` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_benserazide_clearance_variable_CL_Ro` may be invalid.\n - Variable `value_component_benserazide_clearance_variable_CL_Ro` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_benserazide_clearance_variable_CL_B` may be invalid.\n - Variable `value_component_benserazide_clearance_variable_CL_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_benserazide_clearance_variable_fm` may be invalid.\n - Variable `value_component_benserazide_clearance_variable_fm` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_Ro_variable_A_Ro` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_Ro_variable_A_Ro` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_Ro_variable_ka_M` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_Ro_variable_ka_M` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_Ro_variable_F_Ro` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_Ro_variable_F_Ro` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_Ro_variable_C_Ro_central` may be invalid.\n - Variable `value_component_central_compartment_Ro_variable_C_Ro_central` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_Ro_variable_V1_M` may be invalid.\n - Variable `value_component_central_compartment_Ro_variable_V1_M` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_Ro_variable_CLd_M` may be invalid.\n - Variable `value_component_central_compartment_Ro_variable_CLd_M` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_Ro_variable_CL_M` may be invalid.\n - Variable `value_component_central_compartment_Ro_variable_CL_M` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_peripheral_compartment_Ro_variable_C_Ro_peripheral` may be invalid.\n - Variable `value_component_peripheral_compartment_Ro_variable_C_Ro_peripheral` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_peripheral_compartment_Ro_variable_V2_M` may be invalid.\n - Variable `value_component_peripheral_compartment_Ro_variable_V2_M` may be invalid.\n - XPath could not be validated.\u001b[0m\n warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33mThe SED document is potentially incorrect.\n - Model `model` may be invalid.\n - The changes of the model may be invalid.\n - Change 1 may be invalid.\n - XPath could not be validated.\n - Change 2 may be invalid.\n - XPath could not be validated.\n - Change 3 may be invalid.\n - XPath could not be validated.\n - Change 4 may be invalid.\n - XPath could not be validated.\n - Change 5 may be invalid.\n - XPath could not be validated.\n - Change 6 may be invalid.\n - XPath could not be validated.\n - Change 7 may be invalid.\n - XPath could not be validated.\n - Change 8 may be invalid.\n - XPath could not be validated.\n - Change 9 may be invalid.\n - XPath could not be validated.\n - Change 10 may be invalid.\n - XPath could not be validated.\n - Change 11 may be invalid.\n - XPath could not be validated.\n - Change 12 may be invalid.\n - XPath could not be validated.\n - Change 13 may be invalid.\n - XPath could not be validated.\n - Change 14 may be invalid.\n - XPath could not be validated.\n - Change 15 may be invalid.\n - XPath could not be validated.\n - Change 16 may be invalid.\n - XPath could not be validated.\n - Change 17 may be invalid.\n - XPath could not be validated.\n - Change 18 may be invalid.\n - XPath could not be validated.\n - Change 19 may be invalid.\n - XPath could not be validated.\n - Change 20 may be invalid.\n - XPath could not be validated.\n - Change 21 may be invalid.\n - XPath could not be validated.\n - Change 22 may be invalid.\n - XPath could not be validated.\n - Change 23 may be invalid.\n - XPath could not be validated.\n - Change 24 may be invalid.\n - XPath could not be validated.\n - Change 25 may be invalid.\n - XPath could not be validated.\n - Change 26 may be invalid.\n - XPath could not be validated.\n - Change 27 may be invalid.\n - XPath could not be validated.\n - Change 28 may be invalid.\n - XPath could not be validated.\n - Change 29 may be invalid.\n - XPath could not be validated.\n - Change 30 may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_environment_variable_time` may be invalid.\n - Variable `value_component_environment_variable_time` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_F_b_dopa` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_b_dopa` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_A_dopa_b` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_A_dopa_b` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_ka_b_dopa` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_ka_b_dopa` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_F_G` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_G` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_F_H` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_H` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_CL_H` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_CL_H` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_Q` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_Q` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_f_H` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_f_H` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_L_dopa_variable_C_dopa_b` may be invalid.\n - Variable `value_component_body_compartment_L_dopa_variable_C_dopa_b` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_L_dopa_variable_V_dopa` may be invalid.\n - Variable `value_component_body_compartment_L_dopa_variable_V_dopa` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_3_OMD_variable_C_OMD_b` may be invalid.\n - Variable `value_component_body_compartment_3_OMD_variable_C_OMD_b` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_3_OMD_variable_CL_OMD_b` may be invalid.\n - Variable `value_component_body_compartment_3_OMD_variable_CL_OMD_b` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_3_OMD_variable_V_OMD_b` may be invalid.\n - Variable `value_component_body_compartment_3_OMD_variable_V_OMD_b` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_dopa` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_dopa` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_dopa_0` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_dopa_0` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_COMT` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_COMT` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_AADC` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_AADC` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_AADC0` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_AADC0` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_REST` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_REST` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_ki` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_ki` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_benserazide_variable_A_bens` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_benserazide_variable_A_bens` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_benserazide_variable_ka_Bens` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_benserazide_variable_ka_Bens` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_benserazide_variable_F_Bens` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_benserazide_variable_F_Bens` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_benserazide_variable_C_bens_central` may be invalid.\n - Variable `value_component_central_compartment_benserazide_variable_C_bens_central` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_benserazide_variable_V1_B` may be invalid.\n - Variable `value_component_central_compartment_benserazide_variable_V1_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_benserazide_variable_CLd_B` may be invalid.\n - Variable `value_component_central_compartment_benserazide_variable_CLd_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_peripheral_compartment_benserazide_variable_C_bens_peripheral` may be invalid.\n - Variable `value_component_peripheral_compartment_benserazide_variable_C_bens_peripheral` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_peripheral_compartment_benserazide_variable_V2_B` may be invalid.\n - Variable `value_component_peripheral_compartment_benserazide_variable_V2_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_benserazide_clearance_variable_CL_bens_total` may be invalid.\n - Variable `value_component_benserazide_clearance_variable_CL_bens_total` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_benserazide_clearance_variable_CL_Ro` may be invalid.\n - Variable `value_component_benserazide_clearance_variable_CL_Ro` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_benserazide_clearance_variable_CL_B` may be invalid.\n - Variable `value_component_benserazide_clearance_variable_CL_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_benserazide_clearance_variable_fm` may be invalid.\n - Variable `value_component_benserazide_clearance_variable_fm` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_Ro_variable_A_Ro` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_Ro_variable_A_Ro` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_Ro_variable_ka_M` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_Ro_variable_ka_M` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_Ro_variable_F_Ro` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_Ro_variable_F_Ro` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_Ro_variable_C_Ro_central` may be invalid.\n - Variable `value_component_central_compartment_Ro_variable_C_Ro_central` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_Ro_variable_V1_M` may be invalid.\n - Variable `value_component_central_compartment_Ro_variable_V1_M` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_Ro_variable_CLd_M` may be invalid.\n - Variable `value_component_central_compartment_Ro_variable_CLd_M` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_Ro_variable_CL_M` may be invalid.\n - Variable `value_component_central_compartment_Ro_variable_CL_M` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_peripheral_compartment_Ro_variable_C_Ro_peripheral` may be invalid.\n - Variable `value_component_peripheral_compartment_Ro_variable_C_Ro_peripheral` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_peripheral_compartment_Ro_variable_V2_M` may be invalid.\n - Variable `value_component_peripheral_compartment_Ro_variable_V2_M` may be invalid.\n - XPath could not be validated.\u001b[0m\n warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33mThe COMBINE/OMEX archive may be invalid.\n - The SED-ML file at location `simulation_0.sedml` may be invalid.\n - Model `model` may be invalid.\n - The changes of the model may be invalid.\n - Change 1 may be invalid.\n - XPath could not be validated.\n - Change 2 may be invalid.\n - XPath could not be validated.\n - Change 3 may be invalid.\n - XPath could not be validated.\n - Change 4 may be invalid.\n - XPath could not be validated.\n - Change 5 may be invalid.\n - XPath could not be validated.\n - Change 6 may be invalid.\n - XPath could not be validated.\n - Change 7 may be invalid.\n - XPath could not be validated.\n - Change 8 may be invalid.\n - XPath could not be validated.\n - Change 9 may be invalid.\n - XPath could not be validated.\n - Change 10 may be invalid.\n - XPath could not be validated.\n - Change 11 may be invalid.\n - XPath could not be validated.\n - Change 12 may be invalid.\n - XPath could not be validated.\n - Change 13 may be invalid.\n - XPath could not be validated.\n - Change 14 may be invalid.\n - XPath could not be validated.\n - Change 15 may be invalid.\n - XPath could not be validated.\n - Change 16 may be invalid.\n - XPath could not be validated.\n - Change 17 may be invalid.\n - XPath could not be validated.\n - Change 18 may be invalid.\n - XPath could not be validated.\n - Change 19 may be invalid.\n - XPath could not be validated.\n - Change 20 may be invalid.\n - XPath could not be validated.\n - Change 21 may be invalid.\n - XPath could not be validated.\n - Change 22 may be invalid.\n - XPath could not be validated.\n - Change 23 may be invalid.\n - XPath could not be validated.\n - Change 24 may be invalid.\n - XPath could not be validated.\n - Change 25 may be invalid.\n - XPath could not be validated.\n - Change 26 may be invalid.\n - XPath could not be validated.\n - Change 27 may be invalid.\n - XPath could not be validated.\n - Change 28 may be invalid.\n - XPath could not be validated.\n - Change 29 may be invalid.\n - XPath could not be validated.\n - Change 30 may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_environment_variable_time` may be invalid.\n - Variable `value_component_environment_variable_time` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_F_c_dopa` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_c_dopa` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_A_dopa_c` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_A_dopa_c` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_ka_c_dopa` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_ka_c_dopa` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_F_G` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_G` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_F_H` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_H` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_CL_H` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_CL_H` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_Q` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_Q` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_f_H` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_f_H` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_L_dopa_variable_C_dopa_c` may be invalid.\n - Variable `value_component_body_compartment_L_dopa_variable_C_dopa_c` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_L_dopa_variable_V_dopa` may be invalid.\n - Variable `value_component_body_compartment_L_dopa_variable_V_dopa` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_3_OMD_variable_C_OMD_c` may be invalid.\n - Variable `value_component_body_compartment_3_OMD_variable_C_OMD_c` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_3_OMD_variable_CL_OMD_c` may be invalid.\n - Variable `value_component_body_compartment_3_OMD_variable_CL_OMD_c` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_3_OMD_variable_V_OMD_c` may be invalid.\n - Variable `value_component_body_compartment_3_OMD_variable_V_OMD_c` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_dopa` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_dopa` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_dopa_0` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_dopa_0` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_COMT` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_COMT` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_AADC` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_AADC` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_AADC0` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_AADC0` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_REST` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_REST` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_ki` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_ki` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_benserazide_variable_A_bens` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_benserazide_variable_A_bens` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_benserazide_variable_ka_B` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_benserazide_variable_ka_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_benserazide_variable_F_B` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_benserazide_variable_F_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_benserazide_variable_C_bens_central` may be invalid.\n - Variable `value_component_central_compartment_benserazide_variable_C_bens_central` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_benserazide_variable_V1_B` may be invalid.\n - Variable `value_component_central_compartment_benserazide_variable_V1_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_benserazide_variable_CLd_B` may be invalid.\n - Variable `value_component_central_compartment_benserazide_variable_CLd_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_peripheral_compartment_benserazide_variable_C_bens_peripheral` may be invalid.\n - Variable `value_component_peripheral_compartment_benserazide_variable_C_bens_peripheral` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_peripheral_compartment_benserazide_variable_V2_B` may be invalid.\n - Variable `value_component_peripheral_compartment_benserazide_variable_V2_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_benserazide_clearance_variable_CL_bens_total` may be invalid.\n - Variable `value_component_benserazide_clearance_variable_CL_bens_total` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_benserazide_clearance_variable_CL_Ro` may be invalid.\n - Variable `value_component_benserazide_clearance_variable_CL_Ro` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_benserazide_clearance_variable_CL_B` may be invalid.\n - Variable `value_component_benserazide_clearance_variable_CL_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_benserazide_clearance_variable_fm` may be invalid.\n - Variable `value_component_benserazide_clearance_variable_fm` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_Ro_variable_A_Ro` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_Ro_variable_A_Ro` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_Ro_variable_ka_M` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_Ro_variable_ka_M` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_Ro_variable_F_Ro` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_Ro_variable_F_Ro` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_Ro_variable_C_Ro_central` may be invalid.\n - Variable `value_component_central_compartment_Ro_variable_C_Ro_central` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_Ro_variable_V1_M` may be invalid.\n - Variable `value_component_central_compartment_Ro_variable_V1_M` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_Ro_variable_CLd_M` may be invalid.\n - Variable `value_component_central_compartment_Ro_variable_CLd_M` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_Ro_variable_CL_M` may be invalid.\n - Variable `value_component_central_compartment_Ro_variable_CL_M` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_peripheral_compartment_Ro_variable_C_Ro_peripheral` may be invalid.\n - Variable `value_component_peripheral_compartment_Ro_variable_C_Ro_peripheral` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_peripheral_compartment_Ro_variable_V2_M` may be invalid.\n - Variable `value_component_peripheral_compartment_Ro_variable_V2_M` may be invalid.\n - XPath could not be validated.\n - The SED-ML file at location `simulation_1.sedml` may be invalid.\n - Model `model` may be invalid.\n - The changes of the model may be invalid.\n - Change 1 may be invalid.\n - XPath could not be validated.\n - Change 2 may be invalid.\n - XPath could not be validated.\n - Change 3 may be invalid.\n - XPath could not be validated.\n - Change 4 may be invalid.\n - XPath could not be validated.\n - Change 5 may be invalid.\n - XPath could not be validated.\n - Change 6 may be invalid.\n - XPath could not be validated.\n - Change 7 may be invalid.\n - XPath could not be validated.\n - Change 8 may be invalid.\n - XPath could not be validated.\n - Change 9 may be invalid.\n - XPath could not be validated.\n - Change 10 may be invalid.\n - XPath could not be validated.\n - Change 11 may be invalid.\n - XPath could not be validated.\n - Change 12 may be invalid.\n - XPath could not be validated.\n - Change 13 may be invalid.\n - XPath could not be validated.\n - Change 14 may be invalid.\n - XPath could not be validated.\n - Change 15 may be invalid.\n - XPath could not be validated.\n - Change 16 may be invalid.\n - XPath could not be validated.\n - Change 17 may be invalid.\n - XPath could not be validated.\n - Change 18 may be invalid.\n - XPath could not be validated.\n - Change 19 may be invalid.\n - XPath could not be validated.\n - Change 20 may be invalid.\n - XPath could not be validated.\n - Change 21 may be invalid.\n - XPath could not be validated.\n - Change 22 may be invalid.\n - XPath could not be validated.\n - Change 23 may be invalid.\n - XPath could not be validated.\n - Change 24 may be invalid.\n - XPath could not be validated.\n - Change 25 may be invalid.\n - XPath could not be validated.\n - Change 26 may be invalid.\n - XPath could not be validated.\n - Change 27 may be invalid.\n - XPath could not be validated.\n - Change 28 may be invalid.\n - XPath could not be validated.\n - Change 29 may be invalid.\n - XPath could not be validated.\n - Change 30 may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_environment_variable_time` may be invalid.\n - Variable `value_component_environment_variable_time` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_F_b_dopa` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_b_dopa` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_A_dopa_b` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_A_dopa_b` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_ka_b_dopa` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_ka_b_dopa` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_F_G` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_G` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_F_H` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_H` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_CL_H` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_CL_H` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_Q` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_Q` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_L_dopa_variable_f_H` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_L_dopa_variable_f_H` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_L_dopa_variable_C_dopa_b` may be invalid.\n - Variable `value_component_body_compartment_L_dopa_variable_C_dopa_b` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_L_dopa_variable_V_dopa` may be invalid.\n - Variable `value_component_body_compartment_L_dopa_variable_V_dopa` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_3_OMD_variable_C_OMD_b` may be invalid.\n - Variable `value_component_body_compartment_3_OMD_variable_C_OMD_b` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_3_OMD_variable_CL_OMD_b` may be invalid.\n - Variable `value_component_body_compartment_3_OMD_variable_CL_OMD_b` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_body_compartment_3_OMD_variable_V_OMD_b` may be invalid.\n - Variable `value_component_body_compartment_3_OMD_variable_V_OMD_b` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_dopa` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_dopa` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_dopa_0` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_dopa_0` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_COMT` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_COMT` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_AADC` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_AADC` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_AADC0` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_AADC0` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_CL_REST` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_CL_REST` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_L_dopa_clearance_variable_ki` may be invalid.\n - Variable `value_component_L_dopa_clearance_variable_ki` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_benserazide_variable_A_bens` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_benserazide_variable_A_bens` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_benserazide_variable_ka_Bens` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_benserazide_variable_ka_Bens` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_benserazide_variable_F_Bens` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_benserazide_variable_F_Bens` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_benserazide_variable_C_bens_central` may be invalid.\n - Variable `value_component_central_compartment_benserazide_variable_C_bens_central` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_benserazide_variable_V1_B` may be invalid.\n - Variable `value_component_central_compartment_benserazide_variable_V1_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_benserazide_variable_CLd_B` may be invalid.\n - Variable `value_component_central_compartment_benserazide_variable_CLd_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_peripheral_compartment_benserazide_variable_C_bens_peripheral` may be invalid.\n - Variable `value_component_peripheral_compartment_benserazide_variable_C_bens_peripheral` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_peripheral_compartment_benserazide_variable_V2_B` may be invalid.\n - Variable `value_component_peripheral_compartment_benserazide_variable_V2_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_benserazide_clearance_variable_CL_bens_total` may be invalid.\n - Variable `value_component_benserazide_clearance_variable_CL_bens_total` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_benserazide_clearance_variable_CL_Ro` may be invalid.\n - Variable `value_component_benserazide_clearance_variable_CL_Ro` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_benserazide_clearance_variable_CL_B` may be invalid.\n - Variable `value_component_benserazide_clearance_variable_CL_B` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_benserazide_clearance_variable_fm` may be invalid.\n - Variable `value_component_benserazide_clearance_variable_fm` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_Ro_variable_A_Ro` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_Ro_variable_A_Ro` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_Ro_variable_ka_M` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_Ro_variable_ka_M` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_gastrointestinal_compartment_Ro_variable_F_Ro` may be invalid.\n - Variable `value_component_gastrointestinal_compartment_Ro_variable_F_Ro` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_Ro_variable_C_Ro_central` may be invalid.\n - Variable `value_component_central_compartment_Ro_variable_C_Ro_central` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_Ro_variable_V1_M` may be invalid.\n - Variable `value_component_central_compartment_Ro_variable_V1_M` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_Ro_variable_CLd_M` may be invalid.\n - Variable `value_component_central_compartment_Ro_variable_CLd_M` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_central_compartment_Ro_variable_CL_M` may be invalid.\n - Variable `value_component_central_compartment_Ro_variable_CL_M` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_peripheral_compartment_Ro_variable_C_Ro_peripheral` may be invalid.\n - Variable `value_component_peripheral_compartment_Ro_variable_C_Ro_peripheral` may be invalid.\n - XPath could not be validated.\n - Data generator `data_generator_value_component_peripheral_compartment_Ro_variable_V2_M` may be invalid.\n - Variable `value_component_peripheral_compartment_Ro_variable_V2_M` may be invalid.\n - XPath could not be validated.\u001b[0m\n warnings.warn(termcolor.colored(message, Colors.warning.value), category)\nArchive contains 2 SED-ML documents with 2 models, 2 simulations, 2 tasks, 2 reports, and 0 plots:\n simulation_0.sedml:\n Tasks (1):\n task\n Reports (1):\n report: 42 data sets\n simulation_1.sedml:\n Tasks (1):\n task\n Reports (1):\n report: 42 data sets\n\nExecuting SED-ML file 1: simulation_0.sedml ...\nExecuting SED-ML file 2: simulation_1.sedml ...\n\nBundling outputs ...\nCleaning up ...\n\n============= SUMMARY =============\nExecuted 2 SED documents:\n SED documents (2):\n Succeeded: 2\n Skipped: 0\n Failed: 0\n Tasks (2):\n Succeeded: 2\n Skipped: 0\n Failed: 0\n Outputs (2):\n Succeeded: 2\n Skipped: 0\n Failed: 0\n\n\n\u001b[0;36m===================================================== Saving log ====================================================\u001b[0m\nCompleted 53.2 KiB/53.2 KiB (601.4 KiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/rawLog.txt\nCompleted 77.1 KiB/77.1 KiB (676.7 KiB/s) with 1 file(s) remaining\rupload: outputs/log.yml to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/outputs/log.yml\n\n\u001b[0;36m================================================== Zipping outputs ==================================================\u001b[0m\n adding: outputs/ (stored 0%)\n adding: outputs/log.yml (deflated 95%)\n adding: outputs/reports.h5 (deflated 89%)\n adding: rawLog.txt (deflated 95%)\n\n\u001b[0;36m=================================================== Saving outputs ==================================================\u001b[0m\nCompleted 63.4 KiB/63.4 KiB (514.7 KiB/s) with 1 file(s) remaining\rupload: outputs/reports.h5 to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/outputs/reports.h5\nCompleted 14.2 KiB/68.4 KiB (146.2 KiB/s) with 2 file(s) remaining\rupload: ./output.zip to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/output.zip\nCompleted 14.2 KiB/68.4 KiB (146.2 KiB/s) with 1 file(s) remaining\rCompleted 68.4 KiB/68.4 KiB (436.6 KiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/rawLog.txt\n\n\u001b[0;36m====================================== Saving contents of COMBINE/OMEX archive ======================================\u001b[0m\nArchive: archive.omex\n inflating: contents/grange_2001a.png \n inflating: contents/grange_2001.session.xml \n inflating: contents/grange_2001_bens.cellml \n inflating: contents/grange_2001b.png \n inflating: contents/grange_2001.cellml \n inflating: contents/grange_2001b.ai \n inflating: contents/grange_2001_bens.session.xml \n inflating: contents/grange_2001a.svg \n inflating: contents/grange_2001_bens.xul \n inflating: contents/grange_2001a.ai \n inflating: contents/grange_2001.xul \n inflating: contents/grange_2001b.svg \n inflating: contents/simulation_0.sedml \n inflating: contents/simulation_1.sedml \n inflating: contents/metadata.rdf \n inflating: contents/manifest.xml \nCompleted 256.0 KiB/2.5 MiB (2.2 MiB/s) with 16 file(s) remaining\rCompleted 512.0 KiB/2.5 MiB (4.1 MiB/s) with 16 file(s) remaining\rCompleted 768.0 KiB/2.5 MiB (5.3 MiB/s) with 16 file(s) remaining\rCompleted 786.0 KiB/2.5 MiB (5.0 MiB/s) with 16 file(s) remaining\rupload: contents/grange_2001_bens.session.xml to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/contents/grange_2001_bens.session.xml\nCompleted 786.0 KiB/2.5 MiB (5.0 MiB/s) with 15 file(s) remaining\rCompleted 817.0 KiB/2.5 MiB (5.1 MiB/s) with 15 file(s) remaining\rupload: contents/grange_2001.cellml to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/contents/grange_2001.cellml\nCompleted 817.0 KiB/2.5 MiB (5.1 MiB/s) with 14 file(s) remaining\rCompleted 829.6 KiB/2.5 MiB (4.7 MiB/s) with 14 file(s) remaining\rupload: contents/grange_2001b.png to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/contents/grange_2001b.png\nCompleted 829.6 KiB/2.5 MiB (4.7 MiB/s) with 13 file(s) remaining\rCompleted 846.0 KiB/2.5 MiB (4.7 MiB/s) with 13 file(s) remaining\rupload: contents/grange_2001.session.xml to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/contents/grange_2001.session.xml\nCompleted 846.0 KiB/2.5 MiB (4.7 MiB/s) with 12 file(s) remaining\rCompleted 901.9 KiB/2.5 MiB (4.9 MiB/s) with 12 file(s) remaining\rupload: contents/grange_2001a.svg to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/contents/grange_2001a.svg\nCompleted 901.9 KiB/2.5 MiB (4.9 MiB/s) with 11 file(s) remaining\rCompleted 912.6 KiB/2.5 MiB (4.9 MiB/s) with 11 file(s) remaining\rupload: contents/grange_2001a.png to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/contents/grange_2001a.png\nCompleted 912.6 KiB/2.5 MiB (4.9 MiB/s) with 10 file(s) remaining\rCompleted 914.4 KiB/2.5 MiB (4.6 MiB/s) with 10 file(s) remaining\rupload: contents/manifest.xml to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/contents/manifest.xml\nCompleted 914.4 KiB/2.5 MiB (4.6 MiB/s) with 9 file(s) remaining\rCompleted 995.6 KiB/2.5 MiB (5.0 MiB/s) with 9 file(s) remaining\rupload: contents/grange_2001b.svg to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/contents/grange_2001b.svg\nCompleted 995.6 KiB/2.5 MiB (5.0 MiB/s) with 8 file(s) remaining\rCompleted 1013.8 KiB/2.5 MiB (4.4 MiB/s) with 8 file(s) remaining\rupload: contents/metadata.rdf to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/contents/metadata.rdf\nCompleted 1013.8 KiB/2.5 MiB (4.4 MiB/s) with 7 file(s) remaining\rCompleted 1.2 MiB/2.5 MiB (5.4 MiB/s) with 7 file(s) remaining \rCompleted 1.5 MiB/2.5 MiB (6.3 MiB/s) with 7 file(s) remaining \rCompleted 1.7 MiB/2.5 MiB (7.3 MiB/s) with 7 file(s) remaining \rCompleted 2.0 MiB/2.5 MiB (8.1 MiB/s) with 7 file(s) remaining \rupload: contents/grange_2001b.ai to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/contents/grange_2001b.ai\nCompleted 2.0 MiB/2.5 MiB (8.1 MiB/s) with 6 file(s) remaining\rCompleted 2.1 MiB/2.5 MiB (7.3 MiB/s) with 6 file(s) remaining\rupload: contents/grange_2001_bens.xul to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/contents/grange_2001_bens.xul\nCompleted 2.1 MiB/2.5 MiB (7.3 MiB/s) with 5 file(s) remaining\rCompleted 2.1 MiB/2.5 MiB (7.5 MiB/s) with 5 file(s) remaining\rupload: contents/grange_2001.xul to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/contents/grange_2001.xul\nCompleted 2.1 MiB/2.5 MiB (7.5 MiB/s) with 4 file(s) remaining\rCompleted 2.2 MiB/2.5 MiB (7.5 MiB/s) with 4 file(s) remaining\rupload: contents/grange_2001_bens.cellml to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/contents/grange_2001_bens.cellml\nCompleted 2.2 MiB/2.5 MiB (7.5 MiB/s) with 3 file(s) remaining\rCompleted 2.2 MiB/2.5 MiB (7.6 MiB/s) with 3 file(s) remaining\rupload: contents/simulation_1.sedml to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/contents/simulation_1.sedml\nCompleted 2.2 MiB/2.5 MiB (7.6 MiB/s) with 2 file(s) remaining\rCompleted 2.3 MiB/2.5 MiB (7.3 MiB/s) with 2 file(s) remaining\rupload: contents/simulation_0.sedml to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/contents/simulation_0.sedml\nCompleted 2.3 MiB/2.5 MiB (7.3 MiB/s) with 1 file(s) remaining\rCompleted 2.5 MiB/2.5 MiB (7.7 MiB/s) with 1 file(s) remaining\rupload: contents/grange_2001a.ai to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/contents/grange_2001a.ai\n\n\u001b[0;36m==================================================== Updating log ===================================================\u001b[0m\nCompleted 59.9 KiB/59.9 KiB (753.4 KiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/6261751d4679625b3246e893/rawLog.txt\n\n\u001b[0;36m=================================================== Saving results ==================================================\u001b[0m\ncreating group /simulation_0.sedml\ncreating dataset /simulation_0.sedml/report, shape: (42, 11), type: float64\ndataset created, uuid: d-174e52ca-89c1153f-17ca-58232f-13aad2, chunk_size: (42, 11)\ncreating group /simulation_1.sedml\ncreating dataset /simulation_1.sedml/report, shape: (42, 11), type: float64\ndataset created, uuid: d-174e52ca-89c1153f-0ee9-a4598d-57fe8a, chunk_size: (42, 11)\ncreating attribute combineArchiveLocation in /simulation_0.sedml\ncreating attribute uri in /simulation_0.sedml\ncreating attribute _type in /simulation_0.sedml/report\ncreating attribute sedmlDataSetDataTypes in /simulation_0.sedml/report\ncreating attribute sedmlDataSetIds in /simulation_0.sedml/report\ncreating attribute sedmlDataSetLabels in /simulation_0.sedml/report\ncreating attribute sedmlDataSetNames in /simulation_0.sedml/report\ncreating attribute sedmlDataSetShapes in /simulation_0.sedml/report\ncreating attribute sedmlId in /simulation_0.sedml/report\ncreating attribute uri in /simulation_0.sedml/report\ncreating attribute combineArchiveLocation in /simulation_1.sedml\ncreating attribute uri in /simulation_1.sedml\ncreating attribute _type in /simulation_1.sedml/report\ncreating attribute sedmlDataSetDataTypes in /simulation_1.sedml/report\ncreating attribute sedmlDataSetIds in /simulation_1.sedml/report\ncreating attribute sedmlDataSetLabels in /simulation_1.sedml/report\ncreating attribute sedmlDataSetNames in /simulation_1.sedml/report\ncreating attribute sedmlDataSetShapes in /simulation_1.sedml/report\ncreating attribute sedmlId in /simulation_1.sedml/report\ncreating attribute uri in /simulation_1.sedml/report\ncreate_links: /\ngot link: simulation_0.sedml\ngot link: simulation_1.sedml\ncreate_links: /simulation_0.sedml\ngot link: report\ncreate_links: /simulation_1.sedml\ngot link: report\nwrite_dataset src: /simulation_0.sedml/report to tgt: /simulation_0.sedml/report, shape: (42, 11), type: float64\niterating over chunks for /simulation_0.sedml/report\nwriting dataset data for slice: (slice(0, 42, 1), slice(0, 11, 1))\ndone with dataload for /simulation_0.sedml/report\nwrite_dataset src: /simulation_1.sedml/report to tgt: /simulation_1.sedml/report, shape: (42, 11), type: float64\niterating over chunks for /simulation_1.sedml/report\nwriting dataset data for slice: (slice(0, 42, 1), slice(0, 11, 1))\ndone with dataload for /simulation_1.sedml/report\nload_file complete\nFile outputs/reports.h5 uploaded to domain: /results/6261751d4679625b3246e893\n\n\u001b[0;36m================================================== Saving final log =================================================\u001b[0m\n\n\u001b[0;36m=========================================== Post-processing simulation run ==========================================\u001b[0m\n\u001b[0;32mProcess the metadata in the COMBINE archive ... succeeded.\nPost the metadata to the API ... succeeded.\nProcess the SED-ML file in the COMBINE archive ... succeeded.\nPost the SED-ML file to the API ... succeeded.\nProcess and upload the outputs of the simulation run ... succeeded.\nProcess the manifest file in the COMBINE archive ... succeeded.\nRead the manifest and post the files to the API ... succeeded.\nCreate thumbnails from the images specified in the manifest ... succeeded.\nPost thumbnails to the API ... succeeded.\nRetrieve the logs of the simulation run ... succeeded.\nPost the logs to the API ... succeeded.\u001b[0m\n\u001b[0;36m================================ Run complete. Thank you for using runBioSimulations! ===============================\u001b[0m","duration":2.281179,"sedDocuments":[{"location":"simulation_0.sedml","status":"SUCCEEDED","exception":null,"skipReason":null,"output":" Found 1 tasks and 1 outputs:\n Tasks:\n `task`\n Outputs:\n `report`\n Executing task 1: `task`\n Executing simulation ... \u001b[34msucceeded\u001b[0m\n Generating 1 outputs ...\n Generating output 1: `report` ... \u001b[34msucceeded\u001b[0m\n\n Executed 1 tasks and 1 outputs:\n Tasks:\n Succeeded: 1\n Skipped: 0\n Failed: 0\n Outputs:\n Succeeded: 1\n Skipped: 0\n Failed: 0\n","duration":0.878285,"tasks":[{"id":"task","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33m- Variable `value_component_gastrointestinal_compartment_benserazide_variable_A_bens` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_L_dopa_variable_Q` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_Ro_variable_A_Ro` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_central_compartment_Ro_variable_C_Ro_central` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_L_dopa_clearance_variable_CL_dopa_0` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_benserazide_clearance_variable_CL_B` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_body_compartment_3_OMD_variable_V_OMD_c` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_central_compartment_Ro_variable_CL_M` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_peripheral_compartment_Ro_variable_C_Ro_peripheral` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_L_dopa_clearance_variable_CL_AADC` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_Ro_variable_F_Ro` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_L_dopa_clearance_variable_ki` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_L_dopa_clearance_variable_CL_dopa` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_peripheral_compartment_benserazide_variable_C_bens_peripheral` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_G` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_body_compartment_L_dopa_variable_V_dopa` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_central_compartment_benserazide_variable_CLd_B` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_benserazide_variable_ka_B` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_benserazide_clearance_variable_CL_Ro` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_c_dopa` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_benserazide_variable_F_B` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_L_dopa_clearance_variable_CL_REST` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_central_compartment_Ro_variable_V1_M` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_peripheral_compartment_Ro_variable_V2_M` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_benserazide_clearance_variable_fm` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_H` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_body_compartment_L_dopa_variable_C_dopa_c` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_L_dopa_clearance_variable_CL_COMT` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_central_compartment_benserazide_variable_V1_B` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_environment_variable_time` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_body_compartment_3_OMD_variable_CL_OMD_c` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_central_compartment_Ro_variable_CLd_M` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_L_dopa_variable_A_dopa_c` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_benserazide_clearance_variable_CL_bens_total` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_central_compartment_benserazide_variable_C_bens_central` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_L_dopa_clearance_variable_CL_AADC0` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_peripheral_compartment_benserazide_variable_V2_B` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_Ro_variable_ka_M` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_L_dopa_variable_f_H` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_body_compartment_3_OMD_variable_C_OMD_c` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_L_dopa_variable_CL_H` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_L_dopa_variable_ka_c_dopa` may be invalid.\n - XPath could not be validated.\u001b[0m\n warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33mThe SED document is potentially incorrect.\n - The following tasks do not contribute to outputs:\n - `repeatedTask`\n - `task1`\u001b[0m\n warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n","duration":0.691442,"algorithm":"KISAO_0000019","simulatorDetails":[{"key":"method","value":"OpenCOR.SimulationSupport.Simulation.run"},{"key":"algorithmParameters","value":[]}]}],"outputs":[{"id":"report","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.027229,"dataSets":[{"id":"data_set_value_component_environment_variable_time","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_L_dopa_variable_F_c_dopa","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_L_dopa_variable_A_dopa_c","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_L_dopa_variable_ka_c_dopa","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_L_dopa_variable_F_G","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_L_dopa_variable_F_H","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_L_dopa_variable_CL_H","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_L_dopa_variable_Q","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_L_dopa_variable_f_H","status":"SUCCEEDED"},{"id":"data_set_value_component_body_compartment_L_dopa_variable_C_dopa_c","status":"SUCCEEDED"},{"id":"data_set_value_component_body_compartment_L_dopa_variable_V_dopa","status":"SUCCEEDED"},{"id":"data_set_value_component_body_compartment_3_OMD_variable_C_OMD_c","status":"SUCCEEDED"},{"id":"data_set_value_component_body_compartment_3_OMD_variable_CL_OMD_c","status":"SUCCEEDED"},{"id":"data_set_value_component_body_compartment_3_OMD_variable_V_OMD_c","status":"SUCCEEDED"},{"id":"data_set_value_component_L_dopa_clearance_variable_CL_dopa","status":"SUCCEEDED"},{"id":"data_set_value_component_L_dopa_clearance_variable_CL_dopa_0","status":"SUCCEEDED"},{"id":"data_set_value_component_L_dopa_clearance_variable_CL_COMT","status":"SUCCEEDED"},{"id":"data_set_value_component_L_dopa_clearance_variable_CL_AADC","status":"SUCCEEDED"},{"id":"data_set_value_component_L_dopa_clearance_variable_CL_AADC0","status":"SUCCEEDED"},{"id":"data_set_value_component_L_dopa_clearance_variable_CL_REST","status":"SUCCEEDED"},{"id":"data_set_value_component_L_dopa_clearance_variable_ki","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_benserazide_variable_A_bens","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_benserazide_variable_ka_B","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_benserazide_variable_F_B","status":"SUCCEEDED"},{"id":"data_set_value_component_central_compartment_benserazide_variable_C_bens_central","status":"SUCCEEDED"},{"id":"data_set_value_component_central_compartment_benserazide_variable_V1_B","status":"SUCCEEDED"},{"id":"data_set_value_component_central_compartment_benserazide_variable_CLd_B","status":"SUCCEEDED"},{"id":"data_set_value_component_peripheral_compartment_benserazide_variable_C_bens_peripheral","status":"SUCCEEDED"},{"id":"data_set_value_component_peripheral_compartment_benserazide_variable_V2_B","status":"SUCCEEDED"},{"id":"data_set_value_component_benserazide_clearance_variable_CL_bens_total","status":"SUCCEEDED"},{"id":"data_set_value_component_benserazide_clearance_variable_CL_Ro","status":"SUCCEEDED"},{"id":"data_set_value_component_benserazide_clearance_variable_CL_B","status":"SUCCEEDED"},{"id":"data_set_value_component_benserazide_clearance_variable_fm","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_Ro_variable_A_Ro","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_Ro_variable_ka_M","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_Ro_variable_F_Ro","status":"SUCCEEDED"},{"id":"data_set_value_component_central_compartment_Ro_variable_C_Ro_central","status":"SUCCEEDED"},{"id":"data_set_value_component_central_compartment_Ro_variable_V1_M","status":"SUCCEEDED"},{"id":"data_set_value_component_central_compartment_Ro_variable_CLd_M","status":"SUCCEEDED"},{"id":"data_set_value_component_central_compartment_Ro_variable_CL_M","status":"SUCCEEDED"},{"id":"data_set_value_component_peripheral_compartment_Ro_variable_C_Ro_peripheral","status":"SUCCEEDED"},{"id":"data_set_value_component_peripheral_compartment_Ro_variable_V2_M","status":"SUCCEEDED"}]}]},{"location":"simulation_1.sedml","status":"SUCCEEDED","exception":null,"skipReason":null,"output":" Found 1 tasks and 1 outputs:\n Tasks:\n `task`\n Outputs:\n `report`\n Executing task 1: `task`\n Executing simulation ... \u001b[34msucceeded\u001b[0m\n Generating 1 outputs ...\n Generating output 1: `report` ... \u001b[34msucceeded\u001b[0m\n\n Executed 1 tasks and 1 outputs:\n Tasks:\n Succeeded: 1\n Skipped: 0\n Failed: 0\n Outputs:\n Succeeded: 1\n Skipped: 0\n Failed: 0\n","duration":0.589623,"tasks":[{"id":"task","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33m- Variable `value_component_benserazide_clearance_variable_CL_Ro` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_benserazide_variable_ka_Bens` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_body_compartment_3_OMD_variable_CL_OMD_b` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_L_dopa_clearance_variable_CL_AADC` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_benserazide_clearance_variable_CL_B` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_benserazide_variable_F_Bens` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_body_compartment_L_dopa_variable_V_dopa` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_L_dopa_clearance_variable_CL_dopa_0` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_peripheral_compartment_Ro_variable_V2_M` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_environment_variable_time` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_peripheral_compartment_Ro_variable_C_Ro_peripheral` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_L_dopa_clearance_variable_CL_AADC0` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_Ro_variable_A_Ro` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_Ro_variable_ka_M` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_L_dopa_variable_A_dopa_b` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_central_compartment_Ro_variable_V1_M` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_body_compartment_3_OMD_variable_V_OMD_b` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_b_dopa` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_central_compartment_benserazide_variable_C_bens_central` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_body_compartment_L_dopa_variable_C_dopa_b` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_L_dopa_clearance_variable_CL_dopa` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_central_compartment_benserazide_variable_V1_B` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_Ro_variable_F_Ro` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_body_compartment_3_OMD_variable_C_OMD_b` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_L_dopa_clearance_variable_ki` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_benserazide_clearance_variable_fm` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_H` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_central_compartment_Ro_variable_C_Ro_central` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_L_dopa_variable_CL_H` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_benserazide_variable_A_bens` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_peripheral_compartment_benserazide_variable_C_bens_peripheral` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_L_dopa_variable_ka_b_dopa` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_central_compartment_benserazide_variable_CLd_B` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_L_dopa_variable_F_G` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_central_compartment_Ro_variable_CLd_M` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_L_dopa_variable_Q` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_L_dopa_clearance_variable_CL_COMT` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_peripheral_compartment_benserazide_variable_V2_B` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_central_compartment_Ro_variable_CL_M` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_gastrointestinal_compartment_L_dopa_variable_f_H` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_benserazide_clearance_variable_CL_bens_total` may be invalid.\n - XPath could not be validated.\n- Variable `value_component_L_dopa_clearance_variable_CL_REST` may be invalid.\n - XPath could not be validated.\u001b[0m\n warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n","duration":0.392581,"algorithm":"KISAO_0000019","simulatorDetails":[{"key":"method","value":"OpenCOR.SimulationSupport.Simulation.run"},{"key":"algorithmParameters","value":[]}]}],"outputs":[{"id":"report","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.022504,"dataSets":[{"id":"data_set_value_component_environment_variable_time","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_L_dopa_variable_F_b_dopa","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_L_dopa_variable_A_dopa_b","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_L_dopa_variable_ka_b_dopa","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_L_dopa_variable_F_G","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_L_dopa_variable_F_H","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_L_dopa_variable_CL_H","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_L_dopa_variable_Q","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_L_dopa_variable_f_H","status":"SUCCEEDED"},{"id":"data_set_value_component_body_compartment_L_dopa_variable_C_dopa_b","status":"SUCCEEDED"},{"id":"data_set_value_component_body_compartment_L_dopa_variable_V_dopa","status":"SUCCEEDED"},{"id":"data_set_value_component_body_compartment_3_OMD_variable_C_OMD_b","status":"SUCCEEDED"},{"id":"data_set_value_component_body_compartment_3_OMD_variable_CL_OMD_b","status":"SUCCEEDED"},{"id":"data_set_value_component_body_compartment_3_OMD_variable_V_OMD_b","status":"SUCCEEDED"},{"id":"data_set_value_component_L_dopa_clearance_variable_CL_dopa","status":"SUCCEEDED"},{"id":"data_set_value_component_L_dopa_clearance_variable_CL_dopa_0","status":"SUCCEEDED"},{"id":"data_set_value_component_L_dopa_clearance_variable_CL_COMT","status":"SUCCEEDED"},{"id":"data_set_value_component_L_dopa_clearance_variable_CL_AADC","status":"SUCCEEDED"},{"id":"data_set_value_component_L_dopa_clearance_variable_CL_AADC0","status":"SUCCEEDED"},{"id":"data_set_value_component_L_dopa_clearance_variable_CL_REST","status":"SUCCEEDED"},{"id":"data_set_value_component_L_dopa_clearance_variable_ki","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_benserazide_variable_A_bens","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_benserazide_variable_ka_Bens","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_benserazide_variable_F_Bens","status":"SUCCEEDED"},{"id":"data_set_value_component_central_compartment_benserazide_variable_C_bens_central","status":"SUCCEEDED"},{"id":"data_set_value_component_central_compartment_benserazide_variable_V1_B","status":"SUCCEEDED"},{"id":"data_set_value_component_central_compartment_benserazide_variable_CLd_B","status":"SUCCEEDED"},{"id":"data_set_value_component_peripheral_compartment_benserazide_variable_C_bens_peripheral","status":"SUCCEEDED"},{"id":"data_set_value_component_peripheral_compartment_benserazide_variable_V2_B","status":"SUCCEEDED"},{"id":"data_set_value_component_benserazide_clearance_variable_CL_bens_total","status":"SUCCEEDED"},{"id":"data_set_value_component_benserazide_clearance_variable_CL_Ro","status":"SUCCEEDED"},{"id":"data_set_value_component_benserazide_clearance_variable_CL_B","status":"SUCCEEDED"},{"id":"data_set_value_component_benserazide_clearance_variable_fm","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_Ro_variable_A_Ro","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_Ro_variable_ka_M","status":"SUCCEEDED"},{"id":"data_set_value_component_gastrointestinal_compartment_Ro_variable_F_Ro","status":"SUCCEEDED"},{"id":"data_set_value_component_central_compartment_Ro_variable_C_Ro_central","status":"SUCCEEDED"},{"id":"data_set_value_component_central_compartment_Ro_variable_V1_M","status":"SUCCEEDED"},{"id":"data_set_value_component_central_compartment_Ro_variable_CLd_M","status":"SUCCEEDED"},{"id":"data_set_value_component_central_compartment_Ro_variable_CL_M","status":"SUCCEEDED"},{"id":"data_set_value_component_peripheral_compartment_Ro_variable_C_Ro_peripheral","status":"SUCCEEDED"},{"id":"data_set_value_component_peripheral_compartment_Ro_variable_V2_M","status":"SUCCEEDED"}]}]}]}