{"status":"SUCCEEDED","exception":null,"skipReason":null,"output":"\u001b[0;36mThank you for using runBioSimulations!\u001b[0m\n\n\u001b[0;36m================================================ Loading Singularity ================================================\u001b[0m\n\n\u001b[0;36m=================================================== Set up storage ==================================================\u001b[0m\n\n\u001b[0;36m========================================== Downloading COMBINE/OMEX archive =========================================\u001b[0m\n  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current\n                                 Dload  Upload   Total   Spent    Left  Speed\n\r  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0\r100   139  100   139    0     0    473      0 --:--:-- --:--:-- --:--:--   474\n\r100 1346k  100 1346k    0     0  3082k      0 --:--:-- --:--:-- --:--:-- 3082k\n\n\u001b[0;36m=========================================== Executing COMBINE/OMEX archive ==========================================\u001b[0m\nINFO:    Using cached SIF image\nTraceback (most recent call last):\n  File \"/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py\", line 247, in <module>\n    if not update_paths(args.path, args.scripts_dir, args.clear_args, args.extra_args):\n  File \"/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py\", line 213, in update_paths\n    update_scripts(scripts_dir, new_path, clear_args, extra_args)\n  File \"/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py\", line 125, in update_scripts\n    update_script(os.path.join(bin_dir, fn), new_path, clear_args, extra_args)\n  File \"/home/opencor/OpenCOR/bin/../python/bin/set_python_path.py\", line 118, in update_script\n    with open(script_filename, 'w') as f:\nOSError: [Errno 30] Read-only file system: '/home/opencor/OpenCOR/bin/../python/bin/biosimulators-utils'\n/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33mCOMBINE/OMEX archive may be invalid.\n  - The manifest does not include its parent COMBINE/OMEX archive. Manifests should include their parent COMBINE/OMEX archives.\u001b[0m\n  warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33mThe SED document is potentially incorrect.\n  - Model `model` may be invalid.\n    - The changes of the model may be invalid.\n      - Change 1 may be invalid.\n        - XPath could not be validated.\n      - Change 2 may be invalid.\n        - XPath could not be validated.\n      - Change 3 may be invalid.\n        - XPath could not be validated.\n      - Change 4 may be invalid.\n        - XPath could not be validated.\n      - Change 5 may be invalid.\n        - XPath could not be validated.\n      - Change 6 may be invalid.\n        - XPath could not be validated.\n      - Change 7 may be invalid.\n        - XPath could not be validated.\n      - Change 8 may be invalid.\n        - XPath could not be validated.\n      - Change 9 may be invalid.\n        - XPath could not be validated.\n      - Change 10 may be invalid.\n        - XPath could not be validated.\n      - Change 11 may be invalid.\n        - XPath could not be validated.\n      - Change 12 may be invalid.\n        - XPath could not be validated.\n      - Change 13 may be invalid.\n        - XPath could not be validated.\n      - Change 14 may be invalid.\n        - XPath could not be validated.\n      - Change 15 may be invalid.\n        - XPath could not be validated.\n      - Change 16 may be invalid.\n        - XPath could not be validated.\n      - Change 17 may be invalid.\n        - XPath could not be validated.\n      - Change 18 may be invalid.\n        - XPath could not be validated.\n      - Change 19 may be invalid.\n        - XPath could not be validated.\n      - Change 20 may be invalid.\n        - XPath could not be validated.\n      - Change 21 may be invalid.\n        - XPath could not be validated.\n      - Change 22 may be invalid.\n        - XPath could not be validated.\n      - Change 23 may be invalid.\n        - XPath could not be validated.\n  - Data generator `data_generator_value_component_environment_variable_time` may be invalid.\n    - Variable `value_component_environment_variable_time` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_M_variable_M` may be invalid.\n    - Variable `value_component_M_variable_M` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_M_variable_Km` may be invalid.\n    - Variable `value_component_M_variable_Km` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_M_variable_vs` may be invalid.\n    - Variable `value_component_M_variable_vs` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_M_variable_vm` may be invalid.\n    - Variable `value_component_M_variable_vm` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_M_variable_n` may be invalid.\n    - Variable `value_component_M_variable_n` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_M_variable_KI` may be invalid.\n    - Variable `value_component_M_variable_KI` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_P0_variable_P0` may be invalid.\n    - Variable `value_component_P0_variable_P0` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_P0_variable_ks` may be invalid.\n    - Variable `value_component_P0_variable_ks` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_P1_variable_P1` may be invalid.\n    - Variable `value_component_P1_variable_P1` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_P2_variable_P2` may be invalid.\n    - Variable `value_component_P2_variable_P2` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_P2_variable_Kd` may be invalid.\n    - Variable `value_component_P2_variable_Kd` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_P2_variable_vd` may be invalid.\n    - Variable `value_component_P2_variable_vd` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_PN_variable_PN` may be invalid.\n    - Variable `value_component_PN_variable_PN` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_Pt_variable_Pt` may be invalid.\n    - Variable `value_component_Pt_variable_Pt` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameters_variable_k1` may be invalid.\n    - Variable `value_component_parameters_variable_k1` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameters_variable_k2` may be invalid.\n    - Variable `value_component_parameters_variable_k2` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameters_variable_K1` may be invalid.\n    - Variable `value_component_parameters_variable_K1` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameters_variable_V1` may be invalid.\n    - Variable `value_component_parameters_variable_V1` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameters_variable_K2` may be invalid.\n    - Variable `value_component_parameters_variable_K2` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameters_variable_V2` may be invalid.\n    - Variable `value_component_parameters_variable_V2` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameters_variable_K3` may be invalid.\n    - Variable `value_component_parameters_variable_K3` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameters_variable_V3` may be invalid.\n    - Variable `value_component_parameters_variable_V3` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameters_variable_K4` may be invalid.\n    - Variable `value_component_parameters_variable_K4` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameters_variable_V4` may be invalid.\n    - Variable `value_component_parameters_variable_V4` may be invalid.\n      - XPath could not be validated.\u001b[0m\n  warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33mThe SED document is potentially incorrect.\n  - Model `model` may be invalid.\n    - The changes of the model may be invalid.\n      - Change 1 may be invalid.\n        - XPath could not be validated.\n      - Change 2 may be invalid.\n        - XPath could not be validated.\n      - Change 3 may be invalid.\n        - XPath could not be validated.\n      - Change 4 may be invalid.\n        - XPath could not be validated.\n      - Change 5 may be invalid.\n        - XPath could not be validated.\n      - Change 6 may be invalid.\n        - XPath could not be validated.\n      - Change 7 may be invalid.\n        - XPath could not be validated.\n      - Change 8 may be invalid.\n        - XPath could not be validated.\n      - Change 9 may be invalid.\n        - XPath could not be validated.\n      - Change 10 may be invalid.\n        - XPath could not be validated.\n      - Change 11 may be invalid.\n        - XPath could not be validated.\n  - Data generator `data_generator_value_component_environment_variable_time` may be invalid.\n    - Variable `value_component_environment_variable_time` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_Z_variable_Z` may be invalid.\n    - Variable `value_component_Z_variable_Z` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_Z_variable_k_3` may be invalid.\n    - Variable `value_component_Z_variable_k_3` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_Z_variable_k_6` may be invalid.\n    - Variable `value_component_Z_variable_k_6` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_Y_variable_Y` may be invalid.\n    - Variable `value_component_Y_variable_Y` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_Y_variable_k_2` may be invalid.\n    - Variable `value_component_Y_variable_k_2` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_Y_variable_k_5` may be invalid.\n    - Variable `value_component_Y_variable_k_5` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_X_variable_X` may be invalid.\n    - Variable `value_component_X_variable_X` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_X_variable_K_I` may be invalid.\n    - Variable `value_component_X_variable_K_I` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_X_variable_k_1` may be invalid.\n    - Variable `value_component_X_variable_k_1` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_X_variable_k_4` may be invalid.\n    - Variable `value_component_X_variable_k_4` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_X_variable_n` may be invalid.\n    - Variable `value_component_X_variable_n` may be invalid.\n      - XPath could not be validated.\u001b[0m\n  warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33mThe SED document is potentially incorrect.\n  - Model `model` may be invalid.\n    - The changes of the model may be invalid.\n      - Change 1 may be invalid.\n        - XPath could not be validated.\n      - Change 2 may be invalid.\n        - XPath could not be validated.\n      - Change 3 may be invalid.\n        - XPath could not be validated.\n      - Change 4 may be invalid.\n        - XPath could not be validated.\n      - Change 5 may be invalid.\n        - XPath could not be validated.\n      - Change 6 may be invalid.\n        - XPath could not be validated.\n      - Change 7 may be invalid.\n        - XPath could not be validated.\n      - Change 8 may be invalid.\n        - XPath could not be validated.\n      - Change 9 may be invalid.\n        - XPath could not be validated.\n      - Change 10 may be invalid.\n        - XPath could not be validated.\n      - Change 11 may be invalid.\n        - XPath could not be validated.\n      - Change 12 may be invalid.\n        - XPath could not be validated.\n      - Change 13 may be invalid.\n        - XPath could not be validated.\n  - Data generator `data_generator_value_component_environment_variable_time` may be invalid.\n    - Variable `value_component_environment_variable_time` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_M_variable_M` may be invalid.\n    - Variable `value_component_M_variable_M` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_M_variable_vs` may be invalid.\n    - Variable `value_component_M_variable_vs` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_M_variable_vm` may be invalid.\n    - Variable `value_component_M_variable_vm` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_M_variable_Km` may be invalid.\n    - Variable `value_component_M_variable_Km` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_M_variable_KI` may be invalid.\n    - Variable `value_component_M_variable_KI` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_M_variable_n` may be invalid.\n    - Variable `value_component_M_variable_n` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_FC_variable_FC` may be invalid.\n    - Variable `value_component_FC_variable_FC` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_FC_variable_Ft` may be invalid.\n    - Variable `value_component_FC_variable_Ft` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_FC_variable_ks` may be invalid.\n    - Variable `value_component_FC_variable_ks` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_FC_variable_vd` may be invalid.\n    - Variable `value_component_FC_variable_vd` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_FC_variable_Kd` may be invalid.\n    - Variable `value_component_FC_variable_Kd` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_FN_variable_FN` may be invalid.\n    - Variable `value_component_FN_variable_FN` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameters_variable_k1` may be invalid.\n    - Variable `value_component_parameters_variable_k1` may be invalid.\n      - XPath could not be validated.\n  - Data generator `data_generator_value_component_parameters_variable_k2` may be invalid.\n    - Variable `value_component_parameters_variable_k2` may be invalid.\n      - XPath could not be validated.\u001b[0m\n  warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33mThe COMBINE/OMEX archive may be invalid.\n  - The SED-ML file at location `simulation_0.sedml` may be invalid.\n    - Model `model` may be invalid.\n      - The changes of the model may be invalid.\n        - Change 1 may be invalid.\n          - XPath could not be validated.\n        - Change 2 may be invalid.\n          - XPath could not be validated.\n        - Change 3 may be invalid.\n          - XPath could not be validated.\n        - Change 4 may be invalid.\n          - XPath could not be validated.\n        - Change 5 may be invalid.\n          - XPath could not be validated.\n        - Change 6 may be invalid.\n          - XPath could not be validated.\n        - Change 7 may be invalid.\n          - XPath could not be validated.\n        - Change 8 may be invalid.\n          - XPath could not be validated.\n        - Change 9 may be invalid.\n          - XPath could not be validated.\n        - Change 10 may be invalid.\n          - XPath could not be validated.\n        - Change 11 may be invalid.\n          - XPath could not be validated.\n        - Change 12 may be invalid.\n          - XPath could not be validated.\n        - Change 13 may be invalid.\n          - XPath could not be validated.\n        - Change 14 may be invalid.\n          - XPath could not be validated.\n        - Change 15 may be invalid.\n          - XPath could not be validated.\n        - Change 16 may be invalid.\n          - XPath could not be validated.\n        - Change 17 may be invalid.\n          - XPath could not be validated.\n        - Change 18 may be invalid.\n          - XPath could not be validated.\n        - Change 19 may be invalid.\n          - XPath could not be validated.\n        - Change 20 may be invalid.\n          - XPath could not be validated.\n        - Change 21 may be invalid.\n          - XPath could not be validated.\n        - Change 22 may be invalid.\n          - XPath could not be validated.\n        - Change 23 may be invalid.\n          - XPath could not be validated.\n    - Data generator `data_generator_value_component_environment_variable_time` may be invalid.\n      - Variable `value_component_environment_variable_time` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_M_variable_M` may be invalid.\n      - Variable `value_component_M_variable_M` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_M_variable_Km` may be invalid.\n      - Variable `value_component_M_variable_Km` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_M_variable_vs` may be invalid.\n      - Variable `value_component_M_variable_vs` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_M_variable_vm` may be invalid.\n      - Variable `value_component_M_variable_vm` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_M_variable_n` may be invalid.\n      - Variable `value_component_M_variable_n` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_M_variable_KI` may be invalid.\n      - Variable `value_component_M_variable_KI` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_P0_variable_P0` may be invalid.\n      - Variable `value_component_P0_variable_P0` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_P0_variable_ks` may be invalid.\n      - Variable `value_component_P0_variable_ks` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_P1_variable_P1` may be invalid.\n      - Variable `value_component_P1_variable_P1` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_P2_variable_P2` may be invalid.\n      - Variable `value_component_P2_variable_P2` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_P2_variable_Kd` may be invalid.\n      - Variable `value_component_P2_variable_Kd` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_P2_variable_vd` may be invalid.\n      - Variable `value_component_P2_variable_vd` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_PN_variable_PN` may be invalid.\n      - Variable `value_component_PN_variable_PN` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_Pt_variable_Pt` may be invalid.\n      - Variable `value_component_Pt_variable_Pt` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameters_variable_k1` may be invalid.\n      - Variable `value_component_parameters_variable_k1` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameters_variable_k2` may be invalid.\n      - Variable `value_component_parameters_variable_k2` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameters_variable_K1` may be invalid.\n      - Variable `value_component_parameters_variable_K1` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameters_variable_V1` may be invalid.\n      - Variable `value_component_parameters_variable_V1` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameters_variable_K2` may be invalid.\n      - Variable `value_component_parameters_variable_K2` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameters_variable_V2` may be invalid.\n      - Variable `value_component_parameters_variable_V2` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameters_variable_K3` may be invalid.\n      - Variable `value_component_parameters_variable_K3` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameters_variable_V3` may be invalid.\n      - Variable `value_component_parameters_variable_V3` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameters_variable_K4` may be invalid.\n      - Variable `value_component_parameters_variable_K4` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameters_variable_V4` may be invalid.\n      - Variable `value_component_parameters_variable_V4` may be invalid.\n        - XPath could not be validated.\n  - The SED-ML file at location `simulation_1.sedml` may be invalid.\n    - Model `model` may be invalid.\n      - The changes of the model may be invalid.\n        - Change 1 may be invalid.\n          - XPath could not be validated.\n        - Change 2 may be invalid.\n          - XPath could not be validated.\n        - Change 3 may be invalid.\n          - XPath could not be validated.\n        - Change 4 may be invalid.\n          - XPath could not be validated.\n        - Change 5 may be invalid.\n          - XPath could not be validated.\n        - Change 6 may be invalid.\n          - XPath could not be validated.\n        - Change 7 may be invalid.\n          - XPath could not be validated.\n        - Change 8 may be invalid.\n          - XPath could not be validated.\n        - Change 9 may be invalid.\n          - XPath could not be validated.\n        - Change 10 may be invalid.\n          - XPath could not be validated.\n        - Change 11 may be invalid.\n          - XPath could not be validated.\n    - Data generator `data_generator_value_component_environment_variable_time` may be invalid.\n      - Variable `value_component_environment_variable_time` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_Z_variable_Z` may be invalid.\n      - Variable `value_component_Z_variable_Z` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_Z_variable_k_3` may be invalid.\n      - Variable `value_component_Z_variable_k_3` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_Z_variable_k_6` may be invalid.\n      - Variable `value_component_Z_variable_k_6` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_Y_variable_Y` may be invalid.\n      - Variable `value_component_Y_variable_Y` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_Y_variable_k_2` may be invalid.\n      - Variable `value_component_Y_variable_k_2` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_Y_variable_k_5` may be invalid.\n      - Variable `value_component_Y_variable_k_5` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_X_variable_X` may be invalid.\n      - Variable `value_component_X_variable_X` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_X_variable_K_I` may be invalid.\n      - Variable `value_component_X_variable_K_I` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_X_variable_k_1` may be invalid.\n      - Variable `value_component_X_variable_k_1` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_X_variable_k_4` may be invalid.\n      - Variable `value_component_X_variable_k_4` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_X_variable_n` may be invalid.\n      - Variable `value_component_X_variable_n` may be invalid.\n        - XPath could not be validated.\n  - The SED-ML file at location `simulation_2.sedml` may be invalid.\n    - Model `model` may be invalid.\n      - The changes of the model may be invalid.\n        - Change 1 may be invalid.\n          - XPath could not be validated.\n        - Change 2 may be invalid.\n          - XPath could not be validated.\n        - Change 3 may be invalid.\n          - XPath could not be validated.\n        - Change 4 may be invalid.\n          - XPath could not be validated.\n        - Change 5 may be invalid.\n          - XPath could not be validated.\n        - Change 6 may be invalid.\n          - XPath could not be validated.\n        - Change 7 may be invalid.\n          - XPath could not be validated.\n        - Change 8 may be invalid.\n          - XPath could not be validated.\n        - Change 9 may be invalid.\n          - XPath could not be validated.\n        - Change 10 may be invalid.\n          - XPath could not be validated.\n        - Change 11 may be invalid.\n          - XPath could not be validated.\n        - Change 12 may be invalid.\n          - XPath could not be validated.\n        - Change 13 may be invalid.\n          - XPath could not be validated.\n    - Data generator `data_generator_value_component_environment_variable_time` may be invalid.\n      - Variable `value_component_environment_variable_time` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_M_variable_M` may be invalid.\n      - Variable `value_component_M_variable_M` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_M_variable_vs` may be invalid.\n      - Variable `value_component_M_variable_vs` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_M_variable_vm` may be invalid.\n      - Variable `value_component_M_variable_vm` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_M_variable_Km` may be invalid.\n      - Variable `value_component_M_variable_Km` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_M_variable_KI` may be invalid.\n      - Variable `value_component_M_variable_KI` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_M_variable_n` may be invalid.\n      - Variable `value_component_M_variable_n` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_FC_variable_FC` may be invalid.\n      - Variable `value_component_FC_variable_FC` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_FC_variable_Ft` may be invalid.\n      - Variable `value_component_FC_variable_Ft` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_FC_variable_ks` may be invalid.\n      - Variable `value_component_FC_variable_ks` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_FC_variable_vd` may be invalid.\n      - Variable `value_component_FC_variable_vd` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_FC_variable_Kd` may be invalid.\n      - Variable `value_component_FC_variable_Kd` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_FN_variable_FN` may be invalid.\n      - Variable `value_component_FN_variable_FN` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameters_variable_k1` may be invalid.\n      - Variable `value_component_parameters_variable_k1` may be invalid.\n        - XPath could not be validated.\n    - Data generator `data_generator_value_component_parameters_variable_k2` may be invalid.\n      - Variable `value_component_parameters_variable_k2` may be invalid.\n        - XPath could not be validated.\u001b[0m\n  warnings.warn(termcolor.colored(message, Colors.warning.value), category)\nArchive contains 3 SED-ML documents with 3 models, 3 simulations, 3 tasks, 3 reports, and 0 plots:\n  simulation_0.sedml:\n    Tasks (1):\n      task\n    Reports (1):\n      report: 25 data sets\n  simulation_1.sedml:\n    Tasks (1):\n      task\n    Reports (1):\n      report: 12 data sets\n  simulation_2.sedml:\n    Tasks (1):\n      task\n    Reports (1):\n      report: 15 data sets\n\nExecuting SED-ML file 1: simulation_0.sedml ...\nExecuting SED-ML file 2: simulation_1.sedml ...\nExecuting SED-ML file 3: simulation_2.sedml ...\n\nBundling outputs ...\nCleaning up ...\n\n============= SUMMARY =============\nExecuted 3 SED documents:\n  SED documents (3):\n    Succeeded: 3\n    Skipped: 0\n    Failed: 0\n  Tasks (3):\n    Succeeded: 3\n    Skipped: 0\n    Failed: 0\n  Outputs (3):\n    Succeeded: 3\n    Skipped: 0\n    Failed: 0\n\n\n\u001b[0;36m===================================================== Saving log ====================================================\u001b[0m\nCompleted 31.1 KiB/31.1 KiB (264.9 KiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/rawLog.txt\nCompleted 44.8 KiB/44.8 KiB (476.8 KiB/s) with 1 file(s) remaining\rupload: outputs/log.yml to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/outputs/log.yml\n\n\u001b[0;36m================================================== Zipping outputs ==================================================\u001b[0m\n  adding: outputs/ (stored 0%)\n  adding: outputs/log.yml (deflated 93%)\n  adding: outputs/reports.h5 (deflated 90%)\n  adding: rawLog.txt (deflated 93%)\n\n\u001b[0;36m=================================================== Saving outputs ==================================================\u001b[0m\nCompleted 46.5 KiB/46.5 KiB (219.5 KiB/s) with 1 file(s) remaining\rupload: outputs/reports.h5 to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/outputs/reports.h5\nCompleted 10.8 KiB/42.8 KiB (134.5 KiB/s) with 2 file(s) remaining\rupload: ./output.zip to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/output.zip\nCompleted 10.8 KiB/42.8 KiB (134.5 KiB/s) with 1 file(s) remaining\rCompleted 42.8 KiB/42.8 KiB (320.2 KiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/rawLog.txt\n\n\u001b[0;36m====================================== Saving contents of COMBINE/OMEX archive ======================================\u001b[0m\nArchive:  archive.omex\n  inflating: contents/gerard_gonze_goldbeter_2009.ai  \n  inflating: contents/gerard_gonze_goldbeter_2009.xul  \n  inflating: contents/goldbeter_1995.svg  \n  inflating: contents/gerard_gonze_goldbeter_2009.png  \n  inflating: contents/leloup_1999.png  \n  inflating: contents/leloup_1999_cropped.png  \n  inflating: contents/goldbeter_1995.png  \n  inflating: contents/leloup_1999.svg  \n  inflating: contents/leloup_1999.ai  \n  inflating: contents/goldbeter_1995.xul  \n  inflating: contents/gerard_gonze_goldbeter_2009b.session.xml  \n  inflating: contents/gerard_gonze_goldbeter_2009.cellml  \n  inflating: contents/gerard_gonze_goldbeter_2009c.session.xml  \n  inflating: contents/gerard_gonze_goldbeter_2009.session.xml  \n  inflating: contents/gerard_gonze_goldbeter_2009.html  \n  inflating: contents/gerard_gonze_goldbeter_2009c.cellml  \n  inflating: contents/gerard_gonze_goldbeter_2009b.cellml  \n  inflating: contents/goldbeter_1995.ai  \n  inflating: contents/gerard_gonze_goldbeter_2009.svg  \n  inflating: contents/simulation_0.sedml  \n  inflating: contents/simulation_1.sedml  \n  inflating: contents/simulation_2.sedml  \n  inflating: contents/metadata.rdf   \n  inflating: contents/manifest.xml   \nCompleted 29.9 KiB/1.7 MiB (297.7 KiB/s) with 24 file(s) remaining\rupload: contents/gerard_gonze_goldbeter_2009.cellml to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/gerard_gonze_goldbeter_2009.cellml\nCompleted 29.9 KiB/1.7 MiB (297.7 KiB/s) with 23 file(s) remaining\rCompleted 285.9 KiB/1.7 MiB (2.5 MiB/s) with 23 file(s) remaining \rCompleted 289.5 KiB/1.7 MiB (2.4 MiB/s) with 23 file(s) remaining \rupload: contents/gerard_gonze_goldbeter_2009.html to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/gerard_gonze_goldbeter_2009.html\nCompleted 289.5 KiB/1.7 MiB (2.4 MiB/s) with 22 file(s) remaining\rCompleted 545.5 KiB/1.7 MiB (4.3 MiB/s) with 22 file(s) remaining\rCompleted 801.5 KiB/1.7 MiB (5.6 MiB/s) with 22 file(s) remaining\rCompleted 816.0 KiB/1.7 MiB (5.6 MiB/s) with 22 file(s) remaining\rupload: contents/gerard_gonze_goldbeter_2009.png to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/gerard_gonze_goldbeter_2009.png\nCompleted 816.0 KiB/1.7 MiB (5.6 MiB/s) with 21 file(s) remaining\rCompleted 822.8 KiB/1.7 MiB (5.1 MiB/s) with 21 file(s) remaining\rupload: contents/gerard_gonze_goldbeter_2009c.cellml to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/gerard_gonze_goldbeter_2009c.cellml\nCompleted 822.8 KiB/1.7 MiB (5.1 MiB/s) with 20 file(s) remaining\rCompleted 1.1 MiB/1.7 MiB (6.6 MiB/s) with 20 file(s) remaining  \rCompleted 1.1 MiB/1.7 MiB (5.7 MiB/s) with 20 file(s) remaining  \rupload: contents/gerard_gonze_goldbeter_2009c.session.xml to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/gerard_gonze_goldbeter_2009c.session.xml\nCompleted 1.1 MiB/1.7 MiB (5.7 MiB/s) with 19 file(s) remaining\rCompleted 1.1 MiB/1.7 MiB (5.6 MiB/s) with 19 file(s) remaining\rupload: contents/gerard_gonze_goldbeter_2009b.session.xml to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/gerard_gonze_goldbeter_2009b.session.xml\nCompleted 1.1 MiB/1.7 MiB (5.6 MiB/s) with 18 file(s) remaining\rCompleted 1.1 MiB/1.7 MiB (5.6 MiB/s) with 18 file(s) remaining\rupload: contents/goldbeter_1995.xul to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/goldbeter_1995.xul\nCompleted 1.1 MiB/1.7 MiB (5.6 MiB/s) with 17 file(s) remaining\rCompleted 1.2 MiB/1.7 MiB (5.9 MiB/s) with 17 file(s) remaining\rupload: contents/leloup_1999.ai to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/leloup_1999.ai\nCompleted 1.2 MiB/1.7 MiB (5.9 MiB/s) with 16 file(s) remaining\rCompleted 1.2 MiB/1.7 MiB (5.8 MiB/s) with 16 file(s) remaining\rupload: contents/goldbeter_1995.png to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/goldbeter_1995.png\nCompleted 1.2 MiB/1.7 MiB (5.8 MiB/s) with 15 file(s) remaining\rCompleted 1.2 MiB/1.7 MiB (5.8 MiB/s) with 15 file(s) remaining\rupload: contents/goldbeter_1995.svg to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/goldbeter_1995.svg\nCompleted 1.2 MiB/1.7 MiB (5.8 MiB/s) with 14 file(s) remaining\rCompleted 1.3 MiB/1.7 MiB (5.7 MiB/s) with 14 file(s) remaining\rupload: contents/leloup_1999.svg to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/leloup_1999.svg\nCompleted 1.3 MiB/1.7 MiB (5.7 MiB/s) with 13 file(s) remaining\rCompleted 1.3 MiB/1.7 MiB (5.7 MiB/s) with 13 file(s) remaining\rupload: contents/leloup_1999.png to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/leloup_1999.png\nCompleted 1.3 MiB/1.7 MiB (5.7 MiB/s) with 12 file(s) remaining\rCompleted 1.3 MiB/1.7 MiB (5.2 MiB/s) with 12 file(s) remaining\rupload: contents/gerard_gonze_goldbeter_2009.ai to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/gerard_gonze_goldbeter_2009.ai\nCompleted 1.3 MiB/1.7 MiB (5.2 MiB/s) with 11 file(s) remaining\rCompleted 1.3 MiB/1.7 MiB (4.9 MiB/s) with 11 file(s) remaining\rupload: contents/leloup_1999_cropped.png to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/leloup_1999_cropped.png\nCompleted 1.3 MiB/1.7 MiB (4.9 MiB/s) with 10 file(s) remaining\rCompleted 1.4 MiB/1.7 MiB (4.8 MiB/s) with 10 file(s) remaining\rupload: contents/metadata.rdf to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/metadata.rdf\nCompleted 1.4 MiB/1.7 MiB (4.8 MiB/s) with 9 file(s) remaining\rCompleted 1.4 MiB/1.7 MiB (4.8 MiB/s) with 9 file(s) remaining\rupload: contents/manifest.xml to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/manifest.xml\nCompleted 1.4 MiB/1.7 MiB (4.8 MiB/s) with 8 file(s) remaining\rCompleted 1.4 MiB/1.7 MiB (4.8 MiB/s) with 8 file(s) remaining\rCompleted 1.6 MiB/1.7 MiB (5.5 MiB/s) with 8 file(s) remaining\rupload: contents/goldbeter_1995.ai to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/goldbeter_1995.ai\nCompleted 1.6 MiB/1.7 MiB (5.5 MiB/s) with 7 file(s) remaining\rupload: contents/simulation_2.sedml to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/simulation_2.sedml\nCompleted 1.6 MiB/1.7 MiB (5.5 MiB/s) with 6 file(s) remaining\rCompleted 1.6 MiB/1.7 MiB (5.4 MiB/s) with 6 file(s) remaining\rupload: contents/simulation_0.sedml to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/simulation_0.sedml\nCompleted 1.6 MiB/1.7 MiB (5.4 MiB/s) with 5 file(s) remaining\rCompleted 1.6 MiB/1.7 MiB (5.2 MiB/s) with 5 file(s) remaining\rupload: contents/gerard_gonze_goldbeter_2009.xul to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/gerard_gonze_goldbeter_2009.xul\nCompleted 1.6 MiB/1.7 MiB (5.2 MiB/s) with 4 file(s) remaining\rCompleted 1.7 MiB/1.7 MiB (5.0 MiB/s) with 4 file(s) remaining\rupload: contents/gerard_gonze_goldbeter_2009b.cellml to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/gerard_gonze_goldbeter_2009b.cellml\nCompleted 1.7 MiB/1.7 MiB (5.0 MiB/s) with 3 file(s) remaining\rCompleted 1.7 MiB/1.7 MiB (4.8 MiB/s) with 3 file(s) remaining\rupload: contents/gerard_gonze_goldbeter_2009.session.xml to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/gerard_gonze_goldbeter_2009.session.xml\nCompleted 1.7 MiB/1.7 MiB (4.8 MiB/s) with 2 file(s) remaining\rCompleted 1.7 MiB/1.7 MiB (4.8 MiB/s) with 2 file(s) remaining\rupload: contents/simulation_1.sedml to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/simulation_1.sedml\nCompleted 1.7 MiB/1.7 MiB (4.8 MiB/s) with 1 file(s) remaining\rCompleted 1.7 MiB/1.7 MiB (4.8 MiB/s) with 1 file(s) remaining\rupload: contents/gerard_gonze_goldbeter_2009.svg to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/contents/gerard_gonze_goldbeter_2009.svg\n\n\u001b[0;36m==================================================== Updating log ===================================================\u001b[0m\nCompleted 40.5 KiB/40.5 KiB (302.7 KiB/s) with 1 file(s) remaining\rupload: ./rawLog.txt to s3://files.biosimulations.org/simulations/626174c8abe612c540c67eae/rawLog.txt\n\n\u001b[0;36m=================================================== Saving results ==================================================\u001b[0m\ncreating group /simulation_0.sedml\ncreating dataset /simulation_0.sedml/report, shape: (25, 11), type: float64\ndataset created, uuid: d-8d186286-c7b77440-e63b-ea5b0c-da9537, chunk_size: (25, 11)\ncreating group /simulation_1.sedml\ncreating dataset /simulation_1.sedml/report, shape: (12, 11), type: float64\ndataset created, uuid: d-8d186286-c7b77440-4b26-1872c2-48cdc7, chunk_size: (12, 11)\ncreating group /simulation_2.sedml\ncreating dataset /simulation_2.sedml/report, shape: (15, 11), type: float64\ndataset created, uuid: d-8d186286-c7b77440-00e0-52683c-5e1671, chunk_size: (15, 11)\ncreating attribute combineArchiveLocation in /simulation_0.sedml\ncreating attribute uri in /simulation_0.sedml\ncreating attribute _type in /simulation_0.sedml/report\ncreating attribute sedmlDataSetDataTypes in /simulation_0.sedml/report\ncreating attribute sedmlDataSetIds in /simulation_0.sedml/report\ncreating attribute sedmlDataSetLabels in /simulation_0.sedml/report\ncreating attribute sedmlDataSetNames in /simulation_0.sedml/report\ncreating attribute sedmlDataSetShapes in /simulation_0.sedml/report\ncreating attribute sedmlId in /simulation_0.sedml/report\ncreating attribute uri in /simulation_0.sedml/report\ncreating attribute combineArchiveLocation in /simulation_1.sedml\ncreating attribute uri in /simulation_1.sedml\ncreating attribute _type in /simulation_1.sedml/report\ncreating attribute sedmlDataSetDataTypes in /simulation_1.sedml/report\ncreating attribute sedmlDataSetIds in /simulation_1.sedml/report\ncreating attribute sedmlDataSetLabels in /simulation_1.sedml/report\ncreating attribute sedmlDataSetNames in /simulation_1.sedml/report\ncreating attribute sedmlDataSetShapes in /simulation_1.sedml/report\ncreating attribute sedmlId in /simulation_1.sedml/report\ncreating attribute uri in /simulation_1.sedml/report\ncreating attribute combineArchiveLocation in /simulation_2.sedml\ncreating attribute uri in /simulation_2.sedml\ncreating attribute _type in /simulation_2.sedml/report\ncreating attribute sedmlDataSetDataTypes in /simulation_2.sedml/report\ncreating attribute sedmlDataSetIds in /simulation_2.sedml/report\ncreating attribute sedmlDataSetLabels in /simulation_2.sedml/report\ncreating attribute sedmlDataSetNames in /simulation_2.sedml/report\ncreating attribute sedmlDataSetShapes in /simulation_2.sedml/report\ncreating attribute sedmlId in /simulation_2.sedml/report\ncreating attribute uri in /simulation_2.sedml/report\ncreate_links: /\ngot link: simulation_0.sedml\ngot link: simulation_1.sedml\ngot link: simulation_2.sedml\ncreate_links: /simulation_0.sedml\ngot link: report\ncreate_links: /simulation_1.sedml\ngot link: report\ncreate_links: /simulation_2.sedml\ngot link: report\nwrite_dataset src: /simulation_0.sedml/report to tgt: /simulation_0.sedml/report, shape: (25, 11), type: float64\niterating over chunks for /simulation_0.sedml/report\nwriting dataset data for slice: (slice(0, 25, 1), slice(0, 11, 1))\ndone with dataload for /simulation_0.sedml/report\nwrite_dataset src: /simulation_1.sedml/report to tgt: /simulation_1.sedml/report, shape: (12, 11), type: float64\niterating over chunks for /simulation_1.sedml/report\nwriting dataset data for slice: (slice(0, 12, 1), slice(0, 11, 1))\ndone with dataload for /simulation_1.sedml/report\nwrite_dataset src: /simulation_2.sedml/report to tgt: /simulation_2.sedml/report, shape: (15, 11), type: float64\niterating over chunks for /simulation_2.sedml/report\nwriting dataset data for slice: (slice(0, 15, 1), slice(0, 11, 1))\ndone with dataload for /simulation_2.sedml/report\nload_file complete\nFile outputs/reports.h5 uploaded to domain: /results/626174c8abe612c540c67eae\n\n\u001b[0;36m================================================== Saving final log =================================================\u001b[0m\n\n\u001b[0;36m=========================================== Post-processing simulation run ==========================================\u001b[0m\n\u001b[0;32mProcess the metadata in the COMBINE archive ... succeeded.\nPost the metadata to the API ... succeeded.\nProcess the SED-ML file in the COMBINE archive ... succeeded.\nPost the SED-ML file to the API ... succeeded.\nRetrieve the logs of the simulation run ... succeeded.\nPost the logs to the API ... succeeded.\nProcess and upload the outputs of the simulation run ... succeeded.\nProcess the manifest file in the COMBINE archive ... succeeded.\nRead the manifest and post the files to the API ... succeeded.\nCreate thumbnails from the images specified in the manifest ... succeeded.\nPost thumbnails to the API ... succeeded.\u001b[0m\n\u001b[0;36m================================ Run complete. Thank you for using runBioSimulations! ===============================\u001b[0m","duration":2.653987,"sedDocuments":[{"location":"simulation_0.sedml","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"  Found 1 tasks and 1 outputs:\n    Tasks:\n      `task`\n    Outputs:\n      `report`\n  Executing task 1: `task`\n    Executing simulation ... \u001b[34msucceeded\u001b[0m\n    Generating 1 outputs ...\n      Generating output 1: `report` ... \u001b[34msucceeded\u001b[0m\n\n  Executed 1 tasks and 1 outputs:\n    Tasks:\n      Succeeded: 1\n      Skipped: 0\n      Failed: 0\n    Outputs:\n      Succeeded: 1\n      Skipped: 0\n      Failed: 0\n","duration":0.851357,"tasks":[{"id":"task","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33m- Variable `value_component_M_variable_vs` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameters_variable_V1` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameters_variable_K1` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameters_variable_V4` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_P1_variable_P1` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_M_variable_M` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_P2_variable_vd` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameters_variable_V2` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_M_variable_Km` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_P2_variable_P2` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_M_variable_n` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_PN_variable_PN` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameters_variable_V3` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_Pt_variable_Pt` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameters_variable_K4` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_P2_variable_Kd` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_M_variable_KI` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameters_variable_k2` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_environment_variable_time` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameters_variable_K3` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_M_variable_vm` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameters_variable_K2` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameters_variable_k1` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_P0_variable_P0` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_P0_variable_ks` may be invalid.\n  - XPath could not be validated.\u001b[0m\n  warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33mThe SED document is potentially incorrect.\n  - The following tasks do not contribute to outputs:\n    - `repeatedTask`\n    - `task1`\u001b[0m\n  warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n","duration":0.693285,"algorithm":"KISAO_0000019","simulatorDetails":[{"key":"method","value":"OpenCOR.SimulationSupport.Simulation.run"},{"key":"algorithmParameters","value":[]}]}],"outputs":[{"id":"report","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.028519,"dataSets":[{"id":"data_set_value_component_environment_variable_time","status":"SUCCEEDED"},{"id":"data_set_value_component_M_variable_M","status":"SUCCEEDED"},{"id":"data_set_value_component_M_variable_Km","status":"SUCCEEDED"},{"id":"data_set_value_component_M_variable_vs","status":"SUCCEEDED"},{"id":"data_set_value_component_M_variable_vm","status":"SUCCEEDED"},{"id":"data_set_value_component_M_variable_n","status":"SUCCEEDED"},{"id":"data_set_value_component_M_variable_KI","status":"SUCCEEDED"},{"id":"data_set_value_component_P0_variable_P0","status":"SUCCEEDED"},{"id":"data_set_value_component_P0_variable_ks","status":"SUCCEEDED"},{"id":"data_set_value_component_P1_variable_P1","status":"SUCCEEDED"},{"id":"data_set_value_component_P2_variable_P2","status":"SUCCEEDED"},{"id":"data_set_value_component_P2_variable_Kd","status":"SUCCEEDED"},{"id":"data_set_value_component_P2_variable_vd","status":"SUCCEEDED"},{"id":"data_set_value_component_PN_variable_PN","status":"SUCCEEDED"},{"id":"data_set_value_component_Pt_variable_Pt","status":"SUCCEEDED"},{"id":"data_set_value_component_parameters_variable_k1","status":"SUCCEEDED"},{"id":"data_set_value_component_parameters_variable_k2","status":"SUCCEEDED"},{"id":"data_set_value_component_parameters_variable_K1","status":"SUCCEEDED"},{"id":"data_set_value_component_parameters_variable_V1","status":"SUCCEEDED"},{"id":"data_set_value_component_parameters_variable_K2","status":"SUCCEEDED"},{"id":"data_set_value_component_parameters_variable_V2","status":"SUCCEEDED"},{"id":"data_set_value_component_parameters_variable_K3","status":"SUCCEEDED"},{"id":"data_set_value_component_parameters_variable_V3","status":"SUCCEEDED"},{"id":"data_set_value_component_parameters_variable_K4","status":"SUCCEEDED"},{"id":"data_set_value_component_parameters_variable_V4","status":"SUCCEEDED"}]}]},{"location":"simulation_1.sedml","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"  Found 1 tasks and 1 outputs:\n    Tasks:\n      `task`\n    Outputs:\n      `report`\n  Executing task 1: `task`\n    Executing simulation ... \u001b[34msucceeded\u001b[0m\n    Generating 1 outputs ...\n      Generating output 1: `report` ... \u001b[34msucceeded\u001b[0m\n\n  Executed 1 tasks and 1 outputs:\n    Tasks:\n      Succeeded: 1\n      Skipped: 0\n      Failed: 0\n    Outputs:\n      Succeeded: 1\n      Skipped: 0\n      Failed: 0\n","duration":0.503324,"tasks":[{"id":"task","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33m- Variable `value_component_Z_variable_k_3` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_Y_variable_Y` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_Z_variable_k_6` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_X_variable_X` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_X_variable_K_I` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_X_variable_k_1` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_X_variable_n` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_Y_variable_k_5` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_Z_variable_Z` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_X_variable_k_4` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_environment_variable_time` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_Y_variable_k_2` may be invalid.\n  - XPath could not be validated.\u001b[0m\n  warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n","duration":0.366632,"algorithm":"KISAO_0000019","simulatorDetails":[{"key":"method","value":"OpenCOR.SimulationSupport.Simulation.run"},{"key":"algorithmParameters","value":[]}]}],"outputs":[{"id":"report","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.015665,"dataSets":[{"id":"data_set_value_component_environment_variable_time","status":"SUCCEEDED"},{"id":"data_set_value_component_Z_variable_Z","status":"SUCCEEDED"},{"id":"data_set_value_component_Z_variable_k_3","status":"SUCCEEDED"},{"id":"data_set_value_component_Z_variable_k_6","status":"SUCCEEDED"},{"id":"data_set_value_component_Y_variable_Y","status":"SUCCEEDED"},{"id":"data_set_value_component_Y_variable_k_2","status":"SUCCEEDED"},{"id":"data_set_value_component_Y_variable_k_5","status":"SUCCEEDED"},{"id":"data_set_value_component_X_variable_X","status":"SUCCEEDED"},{"id":"data_set_value_component_X_variable_K_I","status":"SUCCEEDED"},{"id":"data_set_value_component_X_variable_k_1","status":"SUCCEEDED"},{"id":"data_set_value_component_X_variable_k_4","status":"SUCCEEDED"},{"id":"data_set_value_component_X_variable_n","status":"SUCCEEDED"}]}]},{"location":"simulation_2.sedml","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"  Found 1 tasks and 1 outputs:\n    Tasks:\n      `task`\n    Outputs:\n      `report`\n  Executing task 1: `task`\n    Executing simulation ... \u001b[34msucceeded\u001b[0m\n    Generating 1 outputs ...\n      Generating output 1: `report` ... \u001b[34msucceeded\u001b[0m\n\n  Executed 1 tasks and 1 outputs:\n    Tasks:\n      Succeeded: 1\n      Skipped: 0\n      Failed: 0\n    Outputs:\n      Succeeded: 1\n      Skipped: 0\n      Failed: 0\n","duration":0.52851,"tasks":[{"id":"task","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"/home/opencor/OpenCOR/python/lib/python3.7/site-packages/biosimulators_utils/warnings.py:31: BioSimulatorsWarning: \u001b[33m- Variable `value_component_M_variable_vs` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameters_variable_k1` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_M_variable_n` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_FN_variable_FN` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_FC_variable_Ft` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_environment_variable_time` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_FC_variable_FC` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_parameters_variable_k2` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_FC_variable_ks` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_M_variable_M` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_FC_variable_vd` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_M_variable_KI` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_M_variable_vm` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_M_variable_Km` may be invalid.\n  - XPath could not be validated.\n- Variable `value_component_FC_variable_Kd` may be invalid.\n  - XPath could not be validated.\u001b[0m\n  warnings.warn(termcolor.colored(message, Colors.warning.value), category)\n","duration":0.374863,"algorithm":"KISAO_0000019","simulatorDetails":[{"key":"method","value":"OpenCOR.SimulationSupport.Simulation.run"},{"key":"algorithmParameters","value":[]}]}],"outputs":[{"id":"report","status":"SUCCEEDED","exception":null,"skipReason":null,"output":"","duration":0.017357,"dataSets":[{"id":"data_set_value_component_environment_variable_time","status":"SUCCEEDED"},{"id":"data_set_value_component_M_variable_M","status":"SUCCEEDED"},{"id":"data_set_value_component_M_variable_vs","status":"SUCCEEDED"},{"id":"data_set_value_component_M_variable_vm","status":"SUCCEEDED"},{"id":"data_set_value_component_M_variable_Km","status":"SUCCEEDED"},{"id":"data_set_value_component_M_variable_KI","status":"SUCCEEDED"},{"id":"data_set_value_component_M_variable_n","status":"SUCCEEDED"},{"id":"data_set_value_component_FC_variable_FC","status":"SUCCEEDED"},{"id":"data_set_value_component_FC_variable_Ft","status":"SUCCEEDED"},{"id":"data_set_value_component_FC_variable_ks","status":"SUCCEEDED"},{"id":"data_set_value_component_FC_variable_vd","status":"SUCCEEDED"},{"id":"data_set_value_component_FC_variable_Kd","status":"SUCCEEDED"},{"id":"data_set_value_component_FN_variable_FN","status":"SUCCEEDED"},{"id":"data_set_value_component_parameters_variable_k1","status":"SUCCEEDED"},{"id":"data_set_value_component_parameters_variable_k2","status":"SUCCEEDED"}]}]}]}